RNA–Protein interactions for RNA: ENST00000565626.1

NSMCE1-210, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 2

Gene NSMCE1, Length 259 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-210ENST00000565626 MAML3Q96JK9 1138 aa12.99□□□□□ -0.33
NSMCE1-210ENST00000565626 RBM27Q9P2N5 1060 aaKnown RBP12.99□□□□□ -0.33
NSMCE1-210ENST00000565626 DDX20Q9UHI6 824 aaKnown RBP12.99□□□□□ -0.33
NSMCE1-210ENST00000565626 ANAPC4Q9UJX5 808 aa12.99□□□□□ -0.33
NSMCE1-210ENST00000565626 ISY1Q9ULR0 285 aaKnown RBP12.99□□□□□ -0.33
NSMCE1-210ENST00000565626 NR2E3Q9Y5X4 410 aa12.99□□□□□ -0.33
NSMCE1-210ENST00000565626 COL11A1P12107 1806 aaPredicted RBP12.98□□□□□ -0.33
NSMCE1-210ENST00000565626 TSPY2A6NKD2 308 aa12.98□□□□□ -0.33
NSMCE1-210ENST00000565626 COL6A1P12109 1028 aa12.98□□□□□ -0.33
NSMCE1-210ENST00000565626 SDSP20132 328 aa12.98□□□□□ -0.33
NSMCE1-210ENST00000565626 RRP12Q5JTH9 1297 aaKnown RBP12.98□□□□□ -0.33
NSMCE1-210ENST00000565626 SNRNP48Q6IEG0 339 aaKnown RBP12.98□□□□□ -0.33
NSMCE1-210ENST00000565626 PRPF38AQ8NAV1 312 aaKnown RBP12.98□□□□□ -0.33
NSMCE1-210ENST00000565626 TEX13BQ9BXU2 312 aa12.98□□□□□ -0.33
NSMCE1-210ENST00000565626 OSBPL3Q9H4L5 887 aa12.98□□□□□ -0.33
NSMCE1-210ENST00000565626 RAVER2Q9HCJ3 691 aaKnown RBP12.98□□□□□ -0.33
NSMCE1-210ENST00000565626 ZMYND8Q9ULU4 1186 aaPredicted RBP12.98□□□□□ -0.33
NSMCE1-210ENST00000565626 STX8Q9UNK0 236 aa12.98□□□□□ -0.33
NSMCE1-210ENST00000565626 MTMR7Q9Y216 660 aa12.98□□□□□ -0.33
NSMCE1-210ENST00000565626 CCDC171Q6TFL3 1326 aa12.97□□□□□ -0.33
NSMCE1-210ENST00000565626 TMEM232C9JQI7 657 aa12.97□□□□□ -0.33
NSMCE1-210ENST00000565626 ORC4O43929 436 aa12.97□□□□□ -0.33
NSMCE1-210ENST00000565626 BMP3P12645 472 aa12.97□□□□□ -0.33
NSMCE1-210ENST00000565626 TAL1P17542 331 aaPredicted RBP12.97□□□□□ -0.33
NSMCE1-210ENST00000565626 MCCP23508 829 aa12.97□□□□□ -0.33
NSMCE1-210ENST00000565626 PDE4AP27815 886 aa12.97□□□□□ -0.33
NSMCE1-210ENST00000565626 KCTD2Q14681 263 aa12.97□□□□□ -0.33
NSMCE1-210ENST00000565626 ZNF792Q3KQV3 632 aa12.97□□□□□ -0.33
NSMCE1-210ENST00000565626 SLC38A10Q9HBR0 1119 aa12.97□□□□□ -0.33
NSMCE1-210ENST00000565626 TOMM22Q9NS69 142 aa12.97□□□□□ -0.33
NSMCE1-210ENST00000565626 FEM1BQ9UK73 627 aa12.97□□□□□ -0.33
NSMCE1-210ENST00000565626 ALPK3Q96L96 1907 aa12.97□□□□□ -0.33
NSMCE1-210ENST00000565626 ZNF236Q9UL36 1845 aa12.97□□□□□ -0.33
NSMCE1-210ENST00000565626 MYH4Q9Y623 1939 aa12.96□□□□□ -0.33
NSMCE1-210ENST00000565626 ZBED4O75132 1171 aa12.96□□□□□ -0.33
NSMCE1-210ENST00000565626 FGRP09769 529 aa12.96□□□□□ -0.33
NSMCE1-210ENST00000565626 SYN1P17600 705 aa12.96□□□□□ -0.33
NSMCE1-210ENST00000565626 FXR1P51114 621 aaKnown RBP eCLIP12.96□□□□□ -0.33
NSMCE1-210ENST00000565626 SNAP25P60880 206 aa12.96□□□□□ -0.33
NSMCE1-210ENST00000565626 LRRC26Q2I0M4 334 aa12.96□□□□□ -0.33
NSMCE1-210ENST00000565626 CWC27Q6UX04 472 aaKnown RBP12.96□□□□□ -0.33
NSMCE1-210ENST00000565626 KCTD1Q719H9 257 aa12.96□□□□□ -0.33
NSMCE1-210ENST00000565626 TBC1D10CQ8IV04 446 aa12.96□□□□□ -0.33
NSMCE1-210ENST00000565626 PRO3102Q9H379 93 aa12.96□□□□□ -0.33
NSMCE1-210ENST00000565626 SLC5A4Q9NY91 659 aa12.96□□□□□ -0.33
NSMCE1-210ENST00000565626 SYNPO2Q9UMS6 1093 aa12.96□□□□□ -0.33
NSMCE1-210ENST00000565626 ATP2A1O14983 1001 aa12.95□□□□□ -0.34
NSMCE1-210ENST00000565626 MYCNP04198 464 aaPredicted RBP12.95□□□□□ -0.34
NSMCE1-210ENST00000565626 SLC1A4P43007 532 aa12.95□□□□□ -0.34
NSMCE1-210ENST00000565626 GJC2Q5T442 439 aaPredicted RBP12.95□□□□□ -0.34
NSMCE1-210ENST00000565626 GMCL1Q96IK5 515 aa12.95□□□□□ -0.34
NSMCE1-210ENST00000565626 TINF2Q9BSI4 451 aa12.95□□□□□ -0.34
NSMCE1-210ENST00000565626 SENP6Q9GZR1 1112 aaPredicted RBP12.95□□□□□ -0.34
NSMCE1-210ENST00000565626 HOMER2Q9NSB8 354 aa12.95□□□□□ -0.34
NSMCE1-210ENST00000565626 CTDP1Q9Y5B0 961 aaPredicted RBP12.95□□□□□ -0.34
NSMCE1-210ENST00000565626 SEPT4O43236 478 aa12.94□□□□□ -0.34
NSMCE1-210ENST00000565626 MSCO60682 206 aa12.94□□□□□ -0.34
NSMCE1-210ENST00000565626 COPB2P35606 906 aa12.94□□□□□ -0.34
NSMCE1-210ENST00000565626 NOVP48745 357 aa12.94□□□□□ -0.34
NSMCE1-210ENST00000565626 STAT2P52630 851 aa12.94□□□□□ -0.34
NSMCE1-210ENST00000565626 ATN1P54259 1190 aaPredicted RBP12.94□□□□□ -0.34
NSMCE1-210ENST00000565626 IKQ13123 557 aaPredicted RBP12.94□□□□□ -0.34
NSMCE1-210ENST00000565626 TICAM2Q86XR7 235 aa12.94□□□□□ -0.34
NSMCE1-210ENST00000565626 STAG1Q8WVM7 1258 aa12.94□□□□□ -0.34
NSMCE1-210ENST00000565626 LENG1Q96BZ8 264 aaPredicted RBP12.94□□□□□ -0.34
NSMCE1-210ENST00000565626 AGBL1Q96MI9 1066 aa12.94□□□□□ -0.34
NSMCE1-210ENST00000565626 IL25Q9H293 177 aa12.94□□□□□ -0.34
NSMCE1-210ENST00000565626 DIAPH3Q9NSV4 1193 aa12.94□□□□□ -0.34
NSMCE1-210ENST00000565626 ZNFX1Q9P2E3 1918 aaKnown RBP12.94□□□□□ -0.34
NSMCE1-210ENST00000565626 ZNF536O15090 1300 aa12.93□□□□□ -0.34
NSMCE1-210ENST00000565626 ZMYM6O95789 1325 aa12.93□□□□□ -0.34
NSMCE1-210ENST00000565626 NEDD4P46934 1319 aa12.93□□□□□ -0.34
NSMCE1-210ENST00000565626 DNAJC25-GNG10A0A024R161 153 aa12.93□□□□□ -0.34
NSMCE1-210ENST00000565626 DNM1LO00429 736 aa12.93□□□□□ -0.34
NSMCE1-210ENST00000565626 GSPT1P15170 499 aaKnown RBP12.93□□□□□ -0.34
NSMCE1-210ENST00000565626 CCDC96Q2M329 555 aa12.93□□□□□ -0.34
NSMCE1-210ENST00000565626 AKNAD1Q5T1N1 836 aa12.93□□□□□ -0.34
NSMCE1-210ENST00000565626 TTBK2Q6IQ55 1244 aa12.93□□□□□ -0.34
NSMCE1-210ENST00000565626 RCSD1Q6JBY9 416 aa12.93□□□□□ -0.34
NSMCE1-210ENST00000565626 CCDC174Q6PII3 467 aa12.93□□□□□ -0.34
NSMCE1-210ENST00000565626 DDX11Q96FC9 970 aa12.93□□□□□ -0.34
NSMCE1-210ENST00000565626 FGD4Q96M96 766 aa12.93□□□□□ -0.34
NSMCE1-210ENST00000565626 TMEM47Q9BQJ4 181 aa12.93□□□□□ -0.34
NSMCE1-210ENST00000565626 DIS3Q9Y2L1 958 aaKnown RBP12.93□□□□□ -0.34
NSMCE1-210ENST00000565626 LAMA2P24043 3122 aaKnown RBP12.93□□□□□ -0.34
NSMCE1-210ENST00000565626 SNAI1O95863 264 aaPredicted RBP12.92□□□□□ -0.34
NSMCE1-210ENST00000565626 ZNF865P0CJ78 1059 aaPredicted RBP12.92□□□□□ -0.34
NSMCE1-210ENST00000565626 TOP1P11387 765 aaKnown RBP12.92□□□□□ -0.34
NSMCE1-210ENST00000565626 SLC16A2P36021 539 aa12.92□□□□□ -0.34
NSMCE1-210ENST00000565626 OAZ1P54368 228 aa12.92□□□□□ -0.34
NSMCE1-210ENST00000565626 PPP4R3BQ5MIZ7 849 aa12.92□□□□□ -0.34
NSMCE1-210ENST00000565626 MFSD6Q6ZSS7 791 aa12.92□□□□□ -0.34
NSMCE1-210ENST00000565626 FAM160B2Q86V87 743 aa12.92□□□□□ -0.34
NSMCE1-210ENST00000565626 ANKRD35Q8N283 1001 aa12.92□□□□□ -0.34
NSMCE1-210ENST00000565626 CHURC1Q8WUH1 139 aa12.92□□□□□ -0.34
NSMCE1-210ENST00000565626 ZKSCAN3Q9BRR0 538 aa12.92□□□□□ -0.34
NSMCE1-210ENST00000565626 PRR12Q9ULL5 1215 aa12.92□□□□□ -0.34
NSMCE1-210ENST00000565626 DDX49Q9Y6V7 483 aaKnown RBP12.92□□□□□ -0.34
NSMCE1-210ENST00000565626 FRMPD3Q5JV73 1810 aa12.92□□□□□ -0.34
NSMCE1-210ENST00000565626 SMCHD1A6NHR9 2005 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms