RNA–Protein interactions for RNA: ENST00000564814.1

GINS3-205, Transcript of GINS complex subunit 3, humanhuman

TSL 4

Gene GINS3, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-205ENST00000564814 TRIM22Q8IYM9 498 aa8.69□□□□□ -1.02
GINS3-205ENST00000564814 STAG2Q8N3U4 1231 aa8.69□□□□□ -1.02
GINS3-205ENST00000564814 SRBD1Q8N5C6 995 aaKnown RBP8.69□□□□□ -1.02
GINS3-205ENST00000564814 CHURC1Q8WUH1 139 aa8.69□□□□□ -1.02
GINS3-205ENST00000564814 NUP133Q8WUM0 1156 aa8.69□□□□□ -1.02
GINS3-205ENST00000564814 WASF1Q92558 559 aa8.69□□□□□ -1.02
GINS3-205ENST00000564814 MYL10Q9BUA6 226 aa8.69□□□□□ -1.02
GINS3-205ENST00000564814 SH3GLB2Q9NR46 395 aa8.69□□□□□ -1.02
GINS3-205ENST00000564814 FEM1BQ9UK73 627 aa8.69□□□□□ -1.02
GINS3-205ENST00000564814 ESYT2A0FGR8 921 aa8.68□□□□□ -1.02
GINS3-205ENST00000564814 OAZ1P54368 228 aa8.68□□□□□ -1.02
GINS3-205ENST00000564814 INHBEP58166 350 aa8.68□□□□□ -1.02
GINS3-205ENST00000564814 CCT2P78371 535 aaKnown RBP8.68□□□□□ -1.02
GINS3-205ENST00000564814 MAP2K1Q02750 393 aaPredicted RBP8.68□□□□□ -1.02
GINS3-205ENST00000564814 SNAPC2Q13487 334 aa8.68□□□□□ -1.02
GINS3-205ENST00000564814 MTMR2Q13614 643 aa8.68□□□□□ -1.02
GINS3-205ENST00000564814 PKN1Q16512 942 aa8.68□□□□□ -1.02
GINS3-205ENST00000564814 PFKFB3Q16875 520 aaPredicted RBP8.68□□□□□ -1.02
GINS3-205ENST00000564814 KIAA1755Q5JYT7 1200 aa8.68□□□□□ -1.02
GINS3-205ENST00000564814 SPRYD7Q5W111 196 aa8.68□□□□□ -1.02
GINS3-205ENST00000564814 PPP1R18Q6NYC8 613 aa8.68□□□□□ -1.02
GINS3-205ENST00000564814 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.68□□□□□ -1.02
GINS3-205ENST00000564814 FASTKD5Q7L8L6 764 aaKnown RBP8.68□□□□□ -1.02
GINS3-205ENST00000564814 SAMD3Q8N6K7 520 aa8.68□□□□□ -1.02
GINS3-205ENST00000564814 NECAB1Q8N987 351 aa8.68□□□□□ -1.02
GINS3-205ENST00000564814 GTF3C2Q8WUA4 911 aaPredicted RBP8.68□□□□□ -1.02
GINS3-205ENST00000564814 OPTNQ96CV9 577 aa8.68□□□□□ -1.02
GINS3-205ENST00000564814 WNK4Q96J92 1243 aa8.68□□□□□ -1.02
GINS3-205ENST00000564814 CLMNQ96JQ2 1002 aa8.68□□□□□ -1.02
GINS3-205ENST00000564814 MS4A4AQ96JQ5 239 aa8.68□□□□□ -1.02
GINS3-205ENST00000564814 FEZ1Q99689 392 aa8.68□□□□□ -1.02
GINS3-205ENST00000564814 RANBP17Q9H2T7 1088 aaKnown RBP8.68□□□□□ -1.02
GINS3-205ENST00000564814 NCOA5Q9HCD5 579 aaKnown RBP8.68□□□□□ -1.02
GINS3-205ENST00000564814 AGTPBP1Q9UPW5 1226 aa8.68□□□□□ -1.02
GINS3-205ENST00000564814 SMC3Q9UQE7 1217 aa8.68□□□□□ -1.02
GINS3-205ENST00000564814 CUL9Q8IWT3 2517 aa8.68□□□□□ -1.02
GINS3-205ENST00000564814 UBE2Q2LH0YL09 131 aa8.67□□□□□ -1.02
GINS3-205ENST00000564814 PLEKHA8P1O95397 391 aa8.67□□□□□ -1.02
GINS3-205ENST00000564814 SLC10A3P09131 477 aa8.67□□□□□ -1.02
GINS3-205ENST00000564814 SCG2P13521 617 aa8.67□□□□□ -1.02
GINS3-205ENST00000564814 RXRAP19793 462 aa8.67□□□□□ -1.02
GINS3-205ENST00000564814 GJB2P29033 226 aa8.67□□□□□ -1.02
GINS3-205ENST00000564814 GJA5P36382 358 aa8.67□□□□□ -1.02
GINS3-205ENST00000564814 GTF2A2P52657 109 aa8.67□□□□□ -1.02
GINS3-205ENST00000564814 GHRHRQ02643 423 aa8.67□□□□□ -1.02
GINS3-205ENST00000564814 SSRP1Q08945 709 aaKnown RBP8.67□□□□□ -1.02
GINS3-205ENST00000564814 STK3Q13188 491 aa8.67□□□□□ -1.02
GINS3-205ENST00000564814 PABPC4Q13310 644 aaKnown RBP eCLIP8.67□□□□□ -1.02
GINS3-205ENST00000564814 PRPF38BQ5VTL8 546 aaKnown RBP8.67□□□□□ -1.02
GINS3-205ENST00000564814 GALNT17Q6IS24 598 aa8.67□□□□□ -1.02
GINS3-205ENST00000564814 CATSPERGQ6ZRH7 1159 aa8.67□□□□□ -1.02
GINS3-205ENST00000564814 MOB2Q70IA6 237 aa8.67□□□□□ -1.02
GINS3-205ENST00000564814 RASAL3Q86YV0 1011 aa8.67□□□□□ -1.02
GINS3-205ENST00000564814 MB21D1Q8N884 522 aa8.67□□□□□ -1.02
GINS3-205ENST00000564814 PRPF38AQ8NAV1 312 aaKnown RBP8.67□□□□□ -1.02
GINS3-205ENST00000564814 CCDC102AQ96A19 550 aa8.67□□□□□ -1.02
GINS3-205ENST00000564814 SLC10A4Q96EP9 437 aa8.67□□□□□ -1.02
GINS3-205ENST00000564814 LARP6Q9BRS8 491 aaKnown RBP8.67□□□□□ -1.02
GINS3-205ENST00000564814 BEGAINQ9BUH8 593 aa8.67□□□□□ -1.02
GINS3-205ENST00000564814 TMOD4Q9NZQ9 345 aa8.67□□□□□ -1.02
GINS3-205ENST00000564814 FRMD4AQ9P2Q2 1039 aaPredicted RBP8.67□□□□□ -1.02
GINS3-205ENST00000564814 ORC3Q9UBD5 711 aaPredicted RBP8.67□□□□□ -1.02
GINS3-205ENST00000564814 BAZ2BQ9UIF8 2168 aaKnown RBP8.67□□□□□ -1.02
GINS3-205ENST00000564814 TSKSQ9UJT2 592 aa8.67□□□□□ -1.02
GINS3-205ENST00000564814 PPP1R9AQ9ULJ8 1098 aa8.67□□□□□ -1.02
GINS3-205ENST00000564814 FZD1Q9UP38 647 aa8.67□□□□□ -1.02
GINS3-205ENST00000564814 PNMA6FA0A0J9YX94 578 aa8.66□□□□□ -1.02
GINS3-205ENST00000564814 MANSC4A6NHS7 340 aaPredicted RBP8.66□□□□□ -1.02
GINS3-205ENST00000564814 TRIM75PA6NK02 468 aa8.66□□□□□ -1.02
GINS3-205ENST00000564814 USP17L15C9J2P7 530 aa8.66□□□□□ -1.02
GINS3-205ENST00000564814 USP17L13C9JLJ4 530 aa8.66□□□□□ -1.02
GINS3-205ENST00000564814 USP17L11C9JVI0 530 aa8.66□□□□□ -1.02
GINS3-205ENST00000564814 USP17L18D6R9N7 530 aa8.66□□□□□ -1.02
GINS3-205ENST00000564814 USP17L22D6RA61 530 aa8.66□□□□□ -1.02
GINS3-205ENST00000564814 USP17L17D6RBQ6 530 aa8.66□□□□□ -1.02
GINS3-205ENST00000564814 USP17L19D6RCP7 530 aa8.66□□□□□ -1.02
GINS3-205ENST00000564814 USP17L20D6RJB6 530 aa8.66□□□□□ -1.02
GINS3-205ENST00000564814 ZBTB5O15062 677 aa8.66□□□□□ -1.02
GINS3-205ENST00000564814 JAK2O60674 1132 aa8.66□□□□□ -1.02
GINS3-205ENST00000564814 HSP90AA1P07900 732 aaKnown RBP8.66□□□□□ -1.02
GINS3-205ENST00000564814 CETPP11597 493 aa8.66□□□□□ -1.02
GINS3-205ENST00000564814 XBP1P17861 261 aa8.66□□□□□ -1.02
GINS3-205ENST00000564814 HMGCS2P54868 508 aa8.66□□□□□ -1.02
GINS3-205ENST00000564814 HUNKP57058 714 aa8.66□□□□□ -1.02
GINS3-205ENST00000564814 NUCB2P80303 420 aa8.66□□□□□ -1.02
GINS3-205ENST00000564814 ATP2B2Q01814 1243 aa8.66□□□□□ -1.02
GINS3-205ENST00000564814 USP17L24Q0WX57 530 aa8.66□□□□□ -1.02
GINS3-205ENST00000564814 PRKG1Q13976 671 aa8.66□□□□□ -1.02
GINS3-205ENST00000564814 TTLL12Q14166 644 aaPredicted RBP8.66□□□□□ -1.02
GINS3-205ENST00000564814 FAM83BQ5T0W9 1011 aa8.66□□□□□ -1.02
GINS3-205ENST00000564814 SYDE2Q5VT97 1194 aa8.66□□□□□ -1.02
GINS3-205ENST00000564814 RGMBQ6NW40 437 aa8.66□□□□□ -1.02
GINS3-205ENST00000564814 NOL8Q76FK4 1167 aaKnown RBP8.66□□□□□ -1.02
GINS3-205ENST00000564814 ANKRD23Q86SG2 305 aa8.66□□□□□ -1.02
GINS3-205ENST00000564814 CCDC84Q86UT8 332 aaPredicted RBP8.66□□□□□ -1.02
GINS3-205ENST00000564814 REM2Q8IYK8 340 aaPredicted RBP8.66□□□□□ -1.02
GINS3-205ENST00000564814 ADGRF4Q8IZF3 695 aa8.66□□□□□ -1.02
GINS3-205ENST00000564814 DAGLBQ8NCG7 672 aa8.66□□□□□ -1.02
GINS3-205ENST00000564814 REPS2Q8NFH8 660 aa8.66□□□□□ -1.02
GINS3-205ENST00000564814 FBXO18Q8NFZ0 1043 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms