RNA–Protein interactions for RNA: ENST00000564732.1

ATP2A1-208, Transcript of ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 1, humanhuman

TSL 5

Gene ATP2A1, Length 831 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1-208ENST00000564732 IFNL3Q8IZI9 196 aa16.97■□□□□ 0.31
ATP2A1-208ENST00000564732 LRRC47Q8N1G4 583 aaKnown RBP16.97■□□□□ 0.31
ATP2A1-208ENST00000564732 PRPF38AQ8NAV1 312 aaKnown RBP16.97■□□□□ 0.31
ATP2A1-208ENST00000564732 SEC62Q99442 399 aaKnown RBP16.97■□□□□ 0.31
ATP2A1-208ENST00000564732 ZNF287Q9HBT7 754 aa16.97■□□□□ 0.31
ATP2A1-208ENST00000564732 MTMR4Q9NYA4 1195 aa16.97■□□□□ 0.31
ATP2A1-208ENST00000564732 SYNPO2Q9UMS6 1093 aa16.97■□□□□ 0.31
ATP2A1-208ENST00000564732 STXBP5LQ9Y2K9 1186 aa16.97■□□□□ 0.31
ATP2A1-208ENST00000564732 DNAJC25-GNG10A0A024R161 153 aa16.96■□□□□ 0.31
ATP2A1-208ENST00000564732 PATL2C9JE40 543 aaKnown RBP16.96■□□□□ 0.31
ATP2A1-208ENST00000564732 ATP2A1O14983 1001 aa16.96■□□□□ 0.31
ATP2A1-208ENST00000564732 PGK1P00558 417 aa16.96■□□□□ 0.31
ATP2A1-208ENST00000564732 AKR1A1P14550 325 aa16.96■□□□□ 0.31
ATP2A1-208ENST00000564732 LRRFIP1Q32MZ4 808 aaKnown RBP16.96■□□□□ 0.31
ATP2A1-208ENST00000564732 ZNF444Q8N0Y2 327 aaPredicted RBP16.96■□□□□ 0.31
ATP2A1-208ENST00000564732 MKL1Q969V6 931 aa16.96■□□□□ 0.31
ATP2A1-208ENST00000564732 CNPY2Q9Y2B0 182 aa16.96■□□□□ 0.31
ATP2A1-208ENST00000564732 MCM3APO60318 1980 aa16.96■□□□□ 0.31
ATP2A1-208ENST00000564732 SYNGAP1Q96PV0 1343 aa16.96■□□□□ 0.3
ATP2A1-208ENST00000564732 TRIM43BA6NCK2 446 aa16.95■□□□□ 0.3
ATP2A1-208ENST00000564732 ERC2O15083 957 aa16.95■□□□□ 0.3
ATP2A1-208ENST00000564732 ADAMTS4O75173 837 aa16.95■□□□□ 0.3
ATP2A1-208ENST00000564732 TTLL1O95922 423 aa16.95■□□□□ 0.3
ATP2A1-208ENST00000564732 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.95■□□□□ 0.3
ATP2A1-208ENST00000564732 SH3RF1Q7Z6J0 888 aa16.95■□□□□ 0.3
ATP2A1-208ENST00000564732 RNF180Q86T96 592 aa16.95■□□□□ 0.3
ATP2A1-208ENST00000564732 CPXCR1Q8N123 301 aa16.95■□□□□ 0.3
ATP2A1-208ENST00000564732 MSL3Q8N5Y2 521 aaKnown RBP16.95■□□□□ 0.3
ATP2A1-208ENST00000564732 GMCL1P1Q8NEA9 526 aa16.95■□□□□ 0.3
ATP2A1-208ENST00000564732 KIFC2Q96AC6 838 aa16.95■□□□□ 0.3
ATP2A1-208ENST00000564732 TRIM43Q96BQ3 446 aaPredicted RBP16.95■□□□□ 0.3
ATP2A1-208ENST00000564732 FSD1Q9BTV5 496 aa16.95■□□□□ 0.3
ATP2A1-208ENST00000564732 SLC38A10Q9HBR0 1119 aa16.95■□□□□ 0.3
ATP2A1-208ENST00000564732 A0A1W2PQ45 241 aaPredicted RBP16.94■□□□□ 0.3
ATP2A1-208ENST00000564732 A0A1W2PQY0 241 aa16.94■□□□□ 0.3
ATP2A1-208ENST00000564732 POTEB2H3BUK9 544 aa16.94■□□□□ 0.3
ATP2A1-208ENST00000564732 ZBED4O75132 1171 aa16.94■□□□□ 0.3
ATP2A1-208ENST00000564732 TLE2Q04725 743 aa16.94■□□□□ 0.3
ATP2A1-208ENST00000564732 ZMYM1Q5SVZ6 1142 aa16.94■□□□□ 0.3
ATP2A1-208ENST00000564732 MAMDC4Q6UXC1 1216 aa16.94■□□□□ 0.3
ATP2A1-208ENST00000564732 NEDD1Q8NHV4 660 aa16.94■□□□□ 0.3
ATP2A1-208ENST00000564732 BADQ92934 168 aa16.94■□□□□ 0.3
ATP2A1-208ENST00000564732 DDX11Q96FC9 970 aa16.94■□□□□ 0.3
ATP2A1-208ENST00000564732 FGD4Q96M96 766 aa16.94■□□□□ 0.3
ATP2A1-208ENST00000564732 NACAP1Q9BZK3 213 aa16.94■□□□□ 0.3
ATP2A1-208ENST00000564732 RAVER2Q9HCJ3 691 aaKnown RBP16.94■□□□□ 0.3
ATP2A1-208ENST00000564732 FEM1BQ9UK73 627 aa16.94■□□□□ 0.3
ATP2A1-208ENST00000564732 SALL3Q9BXA9 1300 aa16.94■□□□□ 0.3
ATP2A1-208ENST00000564732 SYNRGQ9UMZ2 1314 aa16.94■□□□□ 0.3
ATP2A1-208ENST00000564732 FOXP2O15409 715 aa16.93■□□□□ 0.3
ATP2A1-208ENST00000564732 SNAI1O95863 264 aaPredicted RBP16.93■□□□□ 0.3
ATP2A1-208ENST00000564732 TSPY3P0CV98 308 aa16.93■□□□□ 0.3
ATP2A1-208ENST00000564732 TSPY8P0CW00 308 aa16.93■□□□□ 0.3
ATP2A1-208ENST00000564732 MX1P20591 662 aa16.93■□□□□ 0.3
ATP2A1-208ENST00000564732 SLC4A3P48751 1232 aa16.93■□□□□ 0.3
ATP2A1-208ENST00000564732 PPARAQ07869 468 aa16.93■□□□□ 0.3
ATP2A1-208ENST00000564732 SHHQ15465 462 aa16.93■□□□□ 0.3
ATP2A1-208ENST00000564732 C9orf50Q5SZB4 431 aa16.93■□□□□ 0.3
ATP2A1-208ENST00000564732 FAM109BQ6ICB4 259 aaPredicted RBP16.93■□□□□ 0.3
ATP2A1-208ENST00000564732 ZNF467Q7Z7K2 595 aaPredicted RBP16.93■□□□□ 0.3
ATP2A1-208ENST00000564732 NAPBQ9H115 298 aa16.93■□□□□ 0.3
ATP2A1-208ENST00000564732 ZHX1Q9UKY1 873 aaPredicted RBP16.93■□□□□ 0.3
ATP2A1-208ENST00000564732 LRRC37A2A6NM11 1700 aa16.93■□□□□ 0.3
ATP2A1-208ENST00000564732 BMP3P12645 472 aa16.92■□□□□ 0.3
ATP2A1-208ENST00000564732 OAZ1P54368 228 aa16.92■□□□□ 0.3
ATP2A1-208ENST00000564732 PDE4BQ07343 736 aa16.92■□□□□ 0.3
ATP2A1-208ENST00000564732 SLFN13Q68D06 897 aa16.92■□□□□ 0.3
ATP2A1-208ENST00000564732 GUCD1Q96NT3 240 aa16.92■□□□□ 0.3
ATP2A1-208ENST00000564732 CTDP1Q9Y5B0 961 aaPredicted RBP16.92■□□□□ 0.3
ATP2A1-208ENST00000564732 SLC3A2P08195 630 aaKnown RBP16.91■□□□□ 0.3
ATP2A1-208ENST00000564732 CLTBP09497 229 aa16.91■□□□□ 0.3
ATP2A1-208ENST00000564732 ITGB8P26012 769 aa16.91■□□□□ 0.3
ATP2A1-208ENST00000564732 TFAP4Q01664 338 aa16.91■□□□□ 0.3
ATP2A1-208ENST00000564732 CCDC129Q6ZRS4 1044 aa16.91■□□□□ 0.3
ATP2A1-208ENST00000564732 KLHDC9Q8NEP7 349 aa16.91■□□□□ 0.3
ATP2A1-208ENST00000564732 CHST13Q8NET6 341 aa16.91■□□□□ 0.3
ATP2A1-208ENST00000564732 TSEN34Q9BSV6 310 aaKnown RBP16.91■□□□□ 0.3
ATP2A1-208ENST00000564732 FBXO40Q9UH90 709 aa16.91■□□□□ 0.3
ATP2A1-208ENST00000564732 FAM184BQ9ULE4 1060 aa16.91■□□□□ 0.3
ATP2A1-208ENST00000564732 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.91■□□□□ 0.3
ATP2A1-208ENST00000564732 UNC80Q8N2C7 3258 aa16.9■□□□□ 0.3
ATP2A1-208ENST00000564732 A0A0C4DFX4 3053 aa16.9■□□□□ 0.3
ATP2A1-208ENST00000564732 MYADML2A6NDP7 307 aa16.9■□□□□ 0.3
ATP2A1-208ENST00000564732 DLL1O00548 723 aa16.9■□□□□ 0.3
ATP2A1-208ENST00000564732 ADCY6O43306 1168 aa16.9■□□□□ 0.3
ATP2A1-208ENST00000564732 PQBP1O60828 265 aaKnown RBP16.9■□□□□ 0.3
ATP2A1-208ENST00000564732 STAT2P52630 851 aa16.9■□□□□ 0.3
ATP2A1-208ENST00000564732 ACLYP53396 1101 aa16.9■□□□□ 0.3
ATP2A1-208ENST00000564732 CCSAPQ6IQ19 270 aaPredicted RBP16.9■□□□□ 0.3
ATP2A1-208ENST00000564732 ANKRD35Q8N283 1001 aa16.9■□□□□ 0.3
ATP2A1-208ENST00000564732 GMCL1Q96IK5 515 aa16.9■□□□□ 0.3
ATP2A1-208ENST00000564732 FAM161BQ96MY7 647 aa16.9■□□□□ 0.3
ATP2A1-208ENST00000564732 HOMER2Q9NSB8 354 aa16.9■□□□□ 0.3
ATP2A1-208ENST00000564732 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.9■□□□□ 0.3
ATP2A1-208ENST00000564732 TACC3Q9Y6A5 838 aa16.9■□□□□ 0.3
ATP2A1-208ENST00000564732 EYSQ5T1H1 3165 aa16.89■□□□□ 0.29
ATP2A1-208ENST00000564732 MOXD2PA6NHM9 499 aa16.89■□□□□ 0.29
ATP2A1-208ENST00000564732 TMEM232C9JQI7 657 aa16.89■□□□□ 0.29
ATP2A1-208ENST00000564732 KIAA0355O15063 1070 aa16.89■□□□□ 0.29
ATP2A1-208ENST00000564732 DUSP11O75319 330 aaKnown RBP16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms