RNA–Protein interactions for RNA: ENST00000564676.5

CDH1-206, Transcript of cadherin 1, humanhuman

TSL 1 (best)

Gene CDH1, Length 969 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-206ENST00000564676 FARP1Q9Y4F1 1045 aaPredicted RBP11.7□□□□□ -0.54
CDH1-206ENST00000564676 SLC15A5A6NIM6 579 aa11.69□□□□□ -0.54
CDH1-206ENST00000564676 CDC45O75419 566 aa11.69□□□□□ -0.54
CDH1-206ENST00000564676 SLC25A27O95847 323 aa11.69□□□□□ -0.54
CDH1-206ENST00000564676 PTPREP23469 700 aa11.69□□□□□ -0.54
CDH1-206ENST00000564676 STAT3P40763 770 aa11.69□□□□□ -0.54
CDH1-206ENST00000564676 SLC4A3P48751 1232 aa11.69□□□□□ -0.54
CDH1-206ENST00000564676 CLCN6P51797 869 aa11.69□□□□□ -0.54
CDH1-206ENST00000564676 MORN1Q5T089 497 aa11.69□□□□□ -0.54
CDH1-206ENST00000564676 RCSD1Q6JBY9 416 aa11.69□□□□□ -0.54
CDH1-206ENST00000564676 KCTD1Q719H9 257 aa11.69□□□□□ -0.54
CDH1-206ENST00000564676 FAM160B2Q86V87 743 aa11.69□□□□□ -0.54
CDH1-206ENST00000564676 SHCBP1Q8NEM2 672 aa11.69□□□□□ -0.54
CDH1-206ENST00000564676 DCAF4Q8WV16 495 aa11.69□□□□□ -0.54
CDH1-206ENST00000564676 GMCL1Q96IK5 515 aa11.69□□□□□ -0.54
CDH1-206ENST00000564676 MROH8Q9H579 483 aa11.69□□□□□ -0.54
CDH1-206ENST00000564676 ANO2Q9NQ90 1003 aa11.69□□□□□ -0.54
CDH1-206ENST00000564676 ZSWIM5Q9P217 1185 aa11.69□□□□□ -0.54
CDH1-206ENST00000564676 RBM8AQ9Y5S9 174 aaKnown RBP11.69□□□□□ -0.54
CDH1-206ENST00000564676 LAMA4Q16363 1823 aa11.69□□□□□ -0.54
CDH1-206ENST00000564676 INHAP05111 366 aa11.68□□□□□ -0.54
CDH1-206ENST00000564676 CYP21A2P08686 494 aa11.68□□□□□ -0.54
CDH1-206ENST00000564676 STAT2P52630 851 aa11.68□□□□□ -0.54
CDH1-206ENST00000564676 MAP2K5Q13163 448 aa11.68□□□□□ -0.54
CDH1-206ENST00000564676 MTFR1Q15390 333 aa11.68□□□□□ -0.54
CDH1-206ENST00000564676 RALYLQ86SE5 291 aaKnown RBP11.68□□□□□ -0.54
CDH1-206ENST00000564676 DGKHQ86XP1 1220 aa11.68□□□□□ -0.54
CDH1-206ENST00000564676 RIOX2Q8IUF8 465 aa11.68□□□□□ -0.54
CDH1-206ENST00000564676 CPXCR1Q8N123 301 aa11.68□□□□□ -0.54
CDH1-206ENST00000564676 ZSCAN10Q96SZ4 725 aaPredicted RBP11.68□□□□□ -0.54
CDH1-206ENST00000564676 UBAC1Q9BSL1 405 aa11.68□□□□□ -0.54
CDH1-206ENST00000564676 LSG1Q9H089 658 aaKnown RBP11.68□□□□□ -0.54
CDH1-206ENST00000564676 PARP14Q460N5 1801 aa11.67□□□□□ -0.54
CDH1-206ENST00000564676 POTEFA5A3E0 1075 aa11.67□□□□□ -0.54
CDH1-206ENST00000564676 STRNO43815 780 aa11.67□□□□□ -0.54
CDH1-206ENST00000564676 HMGCRP04035 888 aa11.67□□□□□ -0.54
CDH1-206ENST00000564676 FDX1P10109 184 aa11.67□□□□□ -0.54
CDH1-206ENST00000564676 XRCC5P13010 732 aaKnown RBP11.67□□□□□ -0.54
CDH1-206ENST00000564676 CD44P16070 742 aaKnown RBP11.67□□□□□ -0.54
CDH1-206ENST00000564676 ZKSCAN1P17029 563 aaPredicted RBP11.67□□□□□ -0.54
CDH1-206ENST00000564676 COPB2P35606 906 aa11.67□□□□□ -0.54
CDH1-206ENST00000564676 GRB14Q14449 540 aa11.67□□□□□ -0.54
CDH1-206ENST00000564676 SNRNP48Q6IEG0 339 aaKnown RBP11.67□□□□□ -0.54
CDH1-206ENST00000564676 DPP9Q86TI2 863 aa11.67□□□□□ -0.54
CDH1-206ENST00000564676 TRMT44Q8IYL2 757 aaKnown RBP11.67□□□□□ -0.54
CDH1-206ENST00000564676 REPS2Q8NFH8 660 aa11.67□□□□□ -0.54
CDH1-206ENST00000564676 NCOA7Q8NI08 942 aa11.67□□□□□ -0.54
CDH1-206ENST00000564676 USP6NLQ92738 828 aa11.67□□□□□ -0.54
CDH1-206ENST00000564676 APBA2Q99767 749 aa11.67□□□□□ -0.54
CDH1-206ENST00000564676 TEX13BQ9BXU2 312 aa11.67□□□□□ -0.54
CDH1-206ENST00000564676 RNF208Q9H0X6 261 aa11.67□□□□□ -0.54
CDH1-206ENST00000564676 KAT14Q9H8E8 782 aa11.67□□□□□ -0.54
CDH1-206ENST00000564676 SLC38A10Q9HBR0 1119 aa11.67□□□□□ -0.54
CDH1-206ENST00000564676 RAVER2Q9HCJ3 691 aaKnown RBP11.67□□□□□ -0.54
CDH1-206ENST00000564676 GPCPD1Q9NPB8 672 aa11.67□□□□□ -0.54
CDH1-206ENST00000564676 ZNF214Q9UL59 606 aaPredicted RBP11.67□□□□□ -0.54
CDH1-206ENST00000564676 COL11A1P12107 1806 aaPredicted RBP11.67□□□□□ -0.54
CDH1-206ENST00000564676 TNKSO95271 1327 aa11.66□□□□□ -0.54
CDH1-206ENST00000564676 FRMPD2Q68DX3 1309 aaPredicted RBP11.66□□□□□ -0.54
CDH1-206ENST00000564676 E7EWF7 191 aa11.66□□□□□ -0.54
CDH1-206ENST00000564676 PLA2G6O60733 806 aa11.66□□□□□ -0.54
CDH1-206ENST00000564676 PDHBP11177 359 aa11.66□□□□□ -0.54
CDH1-206ENST00000564676 FCER1AP12319 257 aa11.66□□□□□ -0.54
CDH1-206ENST00000564676 CCL5P13501 91 aa11.66□□□□□ -0.54
CDH1-206ENST00000564676 ADORA2AP29274 412 aa11.66□□□□□ -0.54
CDH1-206ENST00000564676 RGS19P49795 217 aa11.66□□□□□ -0.54
CDH1-206ENST00000564676 IFIT1BQ5T764 474 aaKnown RBP11.66□□□□□ -0.54
CDH1-206ENST00000564676 TTBK2Q6IQ55 1244 aa11.66□□□□□ -0.54
CDH1-206ENST00000564676 RASGRP2Q7LDG7 609 aa11.66□□□□□ -0.54
CDH1-206ENST00000564676 ENAHQ8N8S7 591 aaPredicted RBP11.66□□□□□ -0.54
CDH1-206ENST00000564676 TRIB2Q92519 343 aa11.66□□□□□ -0.54
CDH1-206ENST00000564676 ANKS1AQ92625 1134 aa11.66□□□□□ -0.54
CDH1-206ENST00000564676 MMP19Q99542 508 aa11.66□□□□□ -0.54
CDH1-206ENST00000564676 UNC93B1Q9H1C4 597 aa11.66□□□□□ -0.54
CDH1-206ENST00000564676 SLC5A4Q9NY91 659 aa11.66□□□□□ -0.54
CDH1-206ENST00000564676 PLXNB2O15031 1838 aa11.65□□□□□ -0.54
CDH1-206ENST00000564676 ERICH2A1L162 156 aa11.65□□□□□ -0.54
CDH1-206ENST00000564676 SLC27A2O14975 620 aa11.65□□□□□ -0.54
CDH1-206ENST00000564676 EN2P19622 333 aaPredicted RBP11.65□□□□□ -0.54
CDH1-206ENST00000564676 SLC16A2P36021 539 aa11.65□□□□□ -0.54
CDH1-206ENST00000564676 OAZ1P54368 228 aa11.65□□□□□ -0.54
CDH1-206ENST00000564676 SNAP25P60880 206 aa11.65□□□□□ -0.54
CDH1-206ENST00000564676 MLLT1Q03111 559 aaPredicted RBP11.65□□□□□ -0.54
CDH1-206ENST00000564676 TRIM32Q13049 653 aa11.65□□□□□ -0.54
CDH1-206ENST00000564676 KCTD2Q14681 263 aa11.65□□□□□ -0.54
CDH1-206ENST00000564676 CCL14Q16627 93 aa11.65□□□□□ -0.54
CDH1-206ENST00000564676 CREB3L3Q68CJ9 461 aa11.65□□□□□ -0.54
CDH1-206ENST00000564676 CCDC174Q6PII3 467 aa11.65□□□□□ -0.54
CDH1-206ENST00000564676 STOX1Q6ZVD7 989 aa11.65□□□□□ -0.54
CDH1-206ENST00000564676 CYB5R4Q7L1T6 521 aa11.65□□□□□ -0.54
CDH1-206ENST00000564676 ABRAQ8N0Z2 381 aa11.65□□□□□ -0.54
CDH1-206ENST00000564676 PNMA1Q8ND90 353 aa11.65□□□□□ -0.54
CDH1-206ENST00000564676 NPLOC4Q8TAT6 608 aa11.65□□□□□ -0.54
CDH1-206ENST00000564676 PRR12Q9ULL5 1215 aa11.65□□□□□ -0.54
CDH1-206ENST00000564676 TAF6LQ9Y6J9 622 aa11.65□□□□□ -0.54
CDH1-206ENST00000564676 A0A0G2JMZ2 1700 aa11.65□□□□□ -0.54
CDH1-206ENST00000564676 ZNFX1Q9P2E3 1918 aaKnown RBP11.64□□□□□ -0.55
CDH1-206ENST00000564676 IFIT3O14879 490 aaKnown RBP11.64□□□□□ -0.55
CDH1-206ENST00000564676 ATP2A1O14983 1001 aa11.64□□□□□ -0.55
CDH1-206ENST00000564676 COBLO75128 1261 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms