RNA–Protein interactions for RNA: ENST00000564511.1

TUBGCP4-209, Transcript of tubulin gamma complex associated protein 4, humanhuman

TSL 3

Gene TUBGCP4, Length 588 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP4-209ENST00000564511 FOXD4L6Q3SYB3 417 aaPredicted RBP6.75□□□□□ -1.33
TUBGCP4-209ENST00000564511 NOM1Q5C9Z4 860 aaKnown RBP6.75□□□□□ -1.33
TUBGCP4-209ENST00000564511 FAM26DQ5JW98 314 aa6.75□□□□□ -1.33
TUBGCP4-209ENST00000564511 ZMYM1Q5SVZ6 1142 aa6.75□□□□□ -1.33
TUBGCP4-209ENST00000564511 INTS3Q68E01 1043 aaKnown RBP6.75□□□□□ -1.33
TUBGCP4-209ENST00000564511 FOXD4L3Q6VB84 417 aaPredicted RBP6.75□□□□□ -1.33
TUBGCP4-209ENST00000564511 COPS6Q7L5N1 327 aa6.75□□□□□ -1.33
TUBGCP4-209ENST00000564511 LRP10Q7Z4F1 713 aa6.75□□□□□ -1.33
TUBGCP4-209ENST00000564511 ETFBKMTQ8IXQ9 262 aa6.75□□□□□ -1.33
TUBGCP4-209ENST00000564511 TBC1D16Q8TBP0 767 aa6.75□□□□□ -1.33
TUBGCP4-209ENST00000564511 CELF1Q92879 486 aaKnown RBP6.75□□□□□ -1.33
TUBGCP4-209ENST00000564511 SMG9Q9H0W8 520 aaKnown RBP6.75□□□□□ -1.33
TUBGCP4-209ENST00000564511 R3HDMLQ9H3Y0 253 aa6.75□□□□□ -1.33
TUBGCP4-209ENST00000564511 CLSPNQ9HAW4 1339 aa6.75□□□□□ -1.33
TUBGCP4-209ENST00000564511 AKAP11Q9UKA4 1901 aa6.74□□□□□ -1.33
TUBGCP4-209ENST00000564511 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.74□□□□□ -1.33
TUBGCP4-209ENST00000564511 J3QW42 95 aa6.74□□□□□ -1.33
TUBGCP4-209ENST00000564511 MMP20O60882 483 aa6.74□□□□□ -1.33
TUBGCP4-209ENST00000564511 SREBF2Q12772 1141 aa6.74□□□□□ -1.33
TUBGCP4-209ENST00000564511 PRKG1Q13976 671 aa6.74□□□□□ -1.33
TUBGCP4-209ENST00000564511 CAPN12Q6ZSI9 719 aa6.74□□□□□ -1.33
TUBGCP4-209ENST00000564511 FBXO11Q86XK2 927 aa6.74□□□□□ -1.33
TUBGCP4-209ENST00000564511 DTWD1Q8N5C7 304 aa6.74□□□□□ -1.33
TUBGCP4-209ENST00000564511 AGBL3Q8NEM8 1001 aa6.74□□□□□ -1.33
TUBGCP4-209ENST00000564511 XAGE3Q8WTP9 111 aa6.74□□□□□ -1.33
TUBGCP4-209ENST00000564511 FAM89AQ96GI7 184 aa6.74□□□□□ -1.33
TUBGCP4-209ENST00000564511 MYOZ2Q9NPC6 264 aa6.74□□□□□ -1.33
TUBGCP4-209ENST00000564511 TSPYL4Q9UJ04 414 aa6.74□□□□□ -1.33
TUBGCP4-209ENST00000564511 TRIM17Q9Y577 477 aa6.74□□□□□ -1.33
TUBGCP4-209ENST00000564511 RANBP2P49792 3224 aaKnown RBP6.74□□□□□ -1.33
TUBGCP4-209ENST00000564511 DUOX1Q9NRD9 1551 aa6.74□□□□□ -1.33
TUBGCP4-209ENST00000564511 LAMB4A4D0S4 1761 aa6.73□□□□□ -1.33
TUBGCP4-209ENST00000564511 BRCA2P51587 3418 aa6.73□□□□□ -1.33
TUBGCP4-209ENST00000564511 UFL1O94874 794 aa6.73□□□□□ -1.33
TUBGCP4-209ENST00000564511 H2AFB1P0C5Y9 115 aa6.73□□□□□ -1.33
TUBGCP4-209ENST00000564511 H2AFB2P0C5Z0 115 aa6.73□□□□□ -1.33
TUBGCP4-209ENST00000564511 EN2P19622 333 aaPredicted RBP6.73□□□□□ -1.33
TUBGCP4-209ENST00000564511 PPP2R1AP30153 589 aa6.73□□□□□ -1.33
TUBGCP4-209ENST00000564511 NF2P35240 595 aa6.73□□□□□ -1.33
TUBGCP4-209ENST00000564511 RPS8P62241 208 aaKnown RBP6.73□□□□□ -1.33
TUBGCP4-209ENST00000564511 SF3B3Q15393 1217 aaKnown RBP6.73□□□□□ -1.33
TUBGCP4-209ENST00000564511 NBPF9Q3BBW0 867 aa6.73□□□□□ -1.33
TUBGCP4-209ENST00000564511 PRSS36Q5K4E3 855 aa6.73□□□□□ -1.33
TUBGCP4-209ENST00000564511 C16orf46Q6P387 395 aa6.73□□□□□ -1.33
TUBGCP4-209ENST00000564511 OTOP1Q7RTM1 612 aa6.73□□□□□ -1.33
TUBGCP4-209ENST00000564511 WFDC8Q8IUA0 241 aa6.73□□□□□ -1.33
TUBGCP4-209ENST00000564511 SSBP4Q9BWG4 385 aaPredicted RBP6.73□□□□□ -1.33
TUBGCP4-209ENST00000564511 POLR2AP24928 1970 aaKnown RBP6.72□□□□□ -1.33
TUBGCP4-209ENST00000564511 ATG7O95352 703 aa6.72□□□□□ -1.33
TUBGCP4-209ENST00000564511 EIF2AK2P19525 551 aaKnown RBP6.72□□□□□ -1.33
TUBGCP4-209ENST00000564511 BRD2P25440 801 aaKnown RBP6.72□□□□□ -1.33
TUBGCP4-209ENST00000564511 ARID4AP29374 1257 aaPredicted RBP6.72□□□□□ -1.33
TUBGCP4-209ENST00000564511 PTPN12Q05209 780 aaKnown RBP6.72□□□□□ -1.33
TUBGCP4-209ENST00000564511 NFE2L2Q16236 605 aa6.72□□□□□ -1.33
TUBGCP4-209ENST00000564511 COL26A1Q96A83 441 aa6.72□□□□□ -1.33
TUBGCP4-209ENST00000564511 GMLQ99445 158 aa6.72□□□□□ -1.33
TUBGCP4-209ENST00000564511 CXXC1Q9P0U4 656 aaPredicted RBP6.72□□□□□ -1.33
TUBGCP4-209ENST00000564511 CEP290O15078 2479 aa6.71□□□□□ -1.33
TUBGCP4-209ENST00000564511 IRS4O14654 1257 aaPredicted RBP6.71□□□□□ -1.34
TUBGCP4-209ENST00000564511 TNFRSF10BO14763 440 aa6.71□□□□□ -1.34
TUBGCP4-209ENST00000564511 DEAF1O75398 565 aaPredicted RBP6.71□□□□□ -1.34
TUBGCP4-209ENST00000564511 PSAPP07602 524 aa6.71□□□□□ -1.34
TUBGCP4-209ENST00000564511 INHBEP58166 350 aa6.71□□□□□ -1.34
TUBGCP4-209ENST00000564511 NAA30Q147X3 362 aaPredicted RBP6.71□□□□□ -1.34
TUBGCP4-209ENST00000564511 TRIP4Q15650 581 aaPredicted RBP6.71□□□□□ -1.34
TUBGCP4-209ENST00000564511 TMEM164Q5U3C3 297 aa6.71□□□□□ -1.34
TUBGCP4-209ENST00000564511 ARMC9Q7Z3E5 817 aa6.71□□□□□ -1.34
TUBGCP4-209ENST00000564511 WFDC12Q8WWY7 111 aa6.71□□□□□ -1.34
TUBGCP4-209ENST00000564511 TP53INP1Q96A56 240 aa6.71□□□□□ -1.34
TUBGCP4-209ENST00000564511 PLD4Q96BZ4 506 aa6.71□□□□□ -1.34
TUBGCP4-209ENST00000564511 NSUN5Q96P11 429 aaKnown RBP6.71□□□□□ -1.34
TUBGCP4-209ENST00000564511 MKNK1Q9BUB5 465 aa6.71□□□□□ -1.34
TUBGCP4-209ENST00000564511 SEC31BQ9NQW1 1179 aa6.71□□□□□ -1.34
TUBGCP4-209ENST00000564511 PODXL2Q9NZ53 605 aa6.71□□□□□ -1.34
TUBGCP4-209ENST00000564511 PTPN22Q9Y2R2 807 aa6.71□□□□□ -1.34
TUBGCP4-209ENST00000564511 PAPPA2Q9BXP8 1791 aa6.71□□□□□ -1.34
TUBGCP4-209ENST00000564511 TAF1P21675 1872 aa6.7□□□□□ -1.34
TUBGCP4-209ENST00000564511 LAMB2P55268 1798 aa6.7□□□□□ -1.34
TUBGCP4-209ENST00000564511 ANKRD36CQ5JPF3 1778 aa6.7□□□□□ -1.34
TUBGCP4-209ENST00000564511 MANSC4A6NHS7 340 aaPredicted RBP6.7□□□□□ -1.34
TUBGCP4-209ENST00000564511 WNT10BO00744 389 aa6.7□□□□□ -1.34
TUBGCP4-209ENST00000564511 HOXD8P13378 290 aaPredicted RBP6.7□□□□□ -1.34
TUBGCP4-209ENST00000564511 IGF2-ASQ6U949 168 aa6.7□□□□□ -1.34
TUBGCP4-209ENST00000564511 CD99L2Q8TCZ2 262 aa6.7□□□□□ -1.34
TUBGCP4-209ENST00000564511 ERO1AQ96HE7 468 aa6.7□□□□□ -1.34
TUBGCP4-209ENST00000564511 PLEKHF1Q96S99 279 aa6.7□□□□□ -1.34
TUBGCP4-209ENST00000564511 ISCA1Q9BUE6 129 aa6.7□□□□□ -1.34
TUBGCP4-209ENST00000564511 ZMYND15Q9H091 742 aa6.7□□□□□ -1.34
TUBGCP4-209ENST00000564511 ANGEL1Q9UNK9 670 aaKnown RBP6.7□□□□□ -1.34
TUBGCP4-209ENST00000564511 FZD1Q9UP38 647 aa6.7□□□□□ -1.34
TUBGCP4-209ENST00000564511 MAPK8IP3Q9UPT6 1336 aa6.7□□□□□ -1.34
TUBGCP4-209ENST00000564511 KDM3BQ7LBC6 1761 aa6.69□□□□□ -1.34
TUBGCP4-209ENST00000564511 COL6A3P12111 3177 aa6.69□□□□□ -1.34
TUBGCP4-209ENST00000564511 WTIPA6NIX2 430 aaPredicted RBP6.69□□□□□ -1.34
TUBGCP4-209ENST00000564511 H0YGN5 161 aa6.69□□□□□ -1.34
TUBGCP4-209ENST00000564511 SASH1O94885 1247 aa6.69□□□□□ -1.34
TUBGCP4-209ENST00000564511 NOS3P29474 1203 aa6.69□□□□□ -1.34
TUBGCP4-209ENST00000564511 SOX18P35713 384 aa6.69□□□□□ -1.34
TUBGCP4-209ENST00000564511 IREB2P48200 963 aaKnown RBP6.69□□□□□ -1.34
TUBGCP4-209ENST00000564511 LDLRAD1Q5T700 205 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms