RNA–Protein interactions for RNA: ENST00000564503.5

CAPN3-212, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 593 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-212ENST00000564503 ZNF765Q7L2R6 523 aa5.7□□□□□ -1.5
CAPN3-212ENST00000564503 SYAP1Q96A49 352 aaPredicted RBP5.7□□□□□ -1.5
CAPN3-212ENST00000564503 IFT57Q9NWB7 429 aa5.7□□□□□ -1.5
CAPN3-212ENST00000564503 TERF2IPQ9NYB0 399 aa5.7□□□□□ -1.5
CAPN3-212ENST00000564503 CRIM1Q9NZV1 1036 aa5.7□□□□□ -1.5
CAPN3-212ENST00000564503 GPN3Q9UHW5 284 aaPredicted RBP5.7□□□□□ -1.5
CAPN3-212ENST00000564503 AKAP2Q9Y2D5 859 aa5.7□□□□□ -1.5
CAPN3-212ENST00000564503 DAGLAQ9Y4D2 1042 aa5.7□□□□□ -1.5
CAPN3-212ENST00000564503 CPSF1Q10570 1443 aaKnown RBP5.7□□□□□ -1.5
CAPN3-212ENST00000564503 RIMS1Q86UR5 1692 aaKnown RBP5.69□□□□□ -1.5
CAPN3-212ENST00000564503 TOPAZ1Q8N9V7 1692 aa5.69□□□□□ -1.5
CAPN3-212ENST00000564503 ATP10DQ9P241 1426 aa5.69□□□□□ -1.5
CAPN3-212ENST00000564503 RIMS2Q9UQ26 1411 aa5.69□□□□□ -1.5
CAPN3-212ENST00000564503 PRPF40AO75400 957 aaKnown RBP5.69□□□□□ -1.5
CAPN3-212ENST00000564503 REC8O95072 547 aa5.69□□□□□ -1.5
CAPN3-212ENST00000564503 PRNPP04156 253 aa5.69□□□□□ -1.5
CAPN3-212ENST00000564503 MCM2P49736 904 aa5.69□□□□□ -1.5
CAPN3-212ENST00000564503 CYP27A1Q02318 531 aa5.69□□□□□ -1.5
CAPN3-212ENST00000564503 ID3Q02535 119 aa5.69□□□□□ -1.5
CAPN3-212ENST00000564503 LMOD3Q0VAK6 560 aa5.69□□□□□ -1.5
CAPN3-212ENST00000564503 KIAA2012Q0VF49 1180 aa5.69□□□□□ -1.5
CAPN3-212ENST00000564503 NFE2L2Q16236 605 aa5.69□□□□□ -1.5
CAPN3-212ENST00000564503 KIF4BQ2VIQ3 1234 aa5.69□□□□□ -1.5
CAPN3-212ENST00000564503 TMEM132EQ6IEE7 984 aa5.69□□□□□ -1.5
CAPN3-212ENST00000564503 OGFOD3Q6PK18 319 aa5.69□□□□□ -1.5
CAPN3-212ENST00000564503 HDGFL2Q7Z4V5 671 aaPredicted RBP5.69□□□□□ -1.5
CAPN3-212ENST00000564503 PDZD3Q86UT5 571 aa5.69□□□□□ -1.5
CAPN3-212ENST00000564503 SIRT2Q8IXJ6 389 aa5.69□□□□□ -1.5
CAPN3-212ENST00000564503 GPT2Q8TD30 523 aa5.69□□□□□ -1.5
CAPN3-212ENST00000564503 STK35Q8TDR2 534 aa5.69□□□□□ -1.5
CAPN3-212ENST00000564503 FANCD2OSQ96PS1 177 aa5.69□□□□□ -1.5
CAPN3-212ENST00000564503 DCTPP1Q9H773 170 aa5.69□□□□□ -1.5
CAPN3-212ENST00000564503 LRRC4CQ9HCJ2 640 aa5.69□□□□□ -1.5
CAPN3-212ENST00000564503 DISC1Q9NRI5 854 aa5.69□□□□□ -1.5
CAPN3-212ENST00000564503 KRT82Q9NSB4 513 aa5.69□□□□□ -1.5
CAPN3-212ENST00000564503 PRDM4Q9UKN5 801 aa5.69□□□□□ -1.5
CAPN3-212ENST00000564503 LRRC37A3O60309 1634 aa5.69□□□□□ -1.5
CAPN3-212ENST00000564503 POGZQ7Z3K3 1410 aa5.68□□□□□ -1.5
CAPN3-212ENST00000564503 YTHDC2Q9H6S0 1430 aaKnown RBP5.68□□□□□ -1.5
CAPN3-212ENST00000564503 FYB1O15117 783 aa5.68□□□□□ -1.5
CAPN3-212ENST00000564503 ZNF853P0CG23 659 aa5.68□□□□□ -1.5
CAPN3-212ENST00000564503 UTP14CQ5TAP6 766 aaKnown RBP5.68□□□□□ -1.5
CAPN3-212ENST00000564503 NFXL1Q6ZNB6 911 aa5.68□□□□□ -1.5
CAPN3-212ENST00000564503 RPAP2Q8IXW5 612 aaPredicted RBP5.68□□□□□ -1.5
CAPN3-212ENST00000564503 ABI1Q8IZP0 508 aa5.68□□□□□ -1.5
CAPN3-212ENST00000564503 ANKRD44Q8N8A2 993 aa5.68□□□□□ -1.5
CAPN3-212ENST00000564503 MYRIPQ8NFW9 859 aa5.68□□□□□ -1.5
CAPN3-212ENST00000564503 KCNB2Q92953 911 aa5.68□□□□□ -1.5
CAPN3-212ENST00000564503 CCDC94Q9BW85 323 aaPredicted RBP5.68□□□□□ -1.5
CAPN3-212ENST00000564503 ATXN3LQ9H3M9 355 aa5.68□□□□□ -1.5
CAPN3-212ENST00000564503 TSPY26PQ9H489 355 aa5.68□□□□□ -1.5
CAPN3-212ENST00000564503 BSDC1Q9NW68 430 aaPredicted RBP5.68□□□□□ -1.5
CAPN3-212ENST00000564503 ZC3H7BQ9UGR2 993 aaKnown RBP5.68□□□□□ -1.5
CAPN3-212ENST00000564503 ADGRE2Q9UHX3 823 aa5.68□□□□□ -1.5
CAPN3-212ENST00000564503 ANGEL1Q9UNK9 670 aaKnown RBP5.68□□□□□ -1.5
CAPN3-212ENST00000564503 PCDHGC5Q9Y5F6 944 aa5.68□□□□□ -1.5
CAPN3-212ENST00000564503 SPATA31D1Q6ZQQ2 1576 aa5.67□□□□□ -1.5
CAPN3-212ENST00000564503 SSH2Q76I76 1423 aa5.67□□□□□ -1.5
CAPN3-212ENST00000564503 SYCE3A1L190 88 aa5.67□□□□□ -1.5
CAPN3-212ENST00000564503 PATL2C9JE40 543 aaKnown RBP5.67□□□□□ -1.5
CAPN3-212ENST00000564503 ERC2O15083 957 aa5.67□□□□□ -1.5
CAPN3-212ENST00000564503 PAX4O43316 350 aa5.67□□□□□ -1.5
CAPN3-212ENST00000564503 PTMAP06454 111 aaKnown RBP5.67□□□□□ -1.5
CAPN3-212ENST00000564503 ARNTP27540 789 aa5.67□□□□□ -1.5
CAPN3-212ENST00000564503 PRKAR2BP31323 418 aa5.67□□□□□ -1.5
CAPN3-212ENST00000564503 HMGN5P82970 282 aaKnown RBP5.67□□□□□ -1.5
CAPN3-212ENST00000564503 TWISTNBQ3B726 338 aaPredicted RBP5.67□□□□□ -1.5
CAPN3-212ENST00000564503 SULF2Q8IWU5 870 aa5.67□□□□□ -1.5
CAPN3-212ENST00000564503 FAM184AQ8NB25 1140 aa5.67□□□□□ -1.5
CAPN3-212ENST00000564503 C3orf58Q8NDZ4 430 aa5.67□□□□□ -1.5
CAPN3-212ENST00000564503 KRTAP4-12Q9BQ66 201 aa5.67□□□□□ -1.5
CAPN3-212ENST00000564503 PIDD1Q9HB75 910 aa5.67□□□□□ -1.5
CAPN3-212ENST00000564503 ZDHHC9Q9Y397 364 aa5.67□□□□□ -1.5
CAPN3-212ENST00000564503 PEAK1Q9H792 1746 aa5.67□□□□□ -1.5
CAPN3-212ENST00000564503 RGS12O14924 1447 aa5.66□□□□□ -1.5
CAPN3-212ENST00000564503 RGPD8O14715 1765 aaPredicted RBP5.66□□□□□ -1.5
CAPN3-212ENST00000564503 LETM1O95202 739 aaPredicted RBP5.66□□□□□ -1.5
CAPN3-212ENST00000564503 SDSP20132 328 aa5.66□□□□□ -1.5
CAPN3-212ENST00000564503 MCCP23508 829 aa5.66□□□□□ -1.5
CAPN3-212ENST00000564503 MAPK8P45983 427 aa5.66□□□□□ -1.5
CAPN3-212ENST00000564503 DMTNQ08495 405 aa5.66□□□□□ -1.5
CAPN3-212ENST00000564503 CUL4AQ13619 759 aa5.66□□□□□ -1.5
CAPN3-212ENST00000564503 PKP1Q13835 747 aa5.66□□□□□ -1.5
CAPN3-212ENST00000564503 VSIG10LQ86VR7 867 aa5.66□□□□□ -1.5
CAPN3-212ENST00000564503 ZSCAN29Q8IWY8 852 aaPredicted RBP5.66□□□□□ -1.5
CAPN3-212ENST00000564503 SMYD4Q8IYR2 804 aaPredicted RBP5.66□□□□□ -1.5
CAPN3-212ENST00000564503 ZGPATQ8N5A5 531 aaKnown RBP5.66□□□□□ -1.5
CAPN3-212ENST00000564503 INTS4Q96HW7 963 aaKnown RBP5.66□□□□□ -1.5
CAPN3-212ENST00000564503 FBXL18Q96ME1 805 aa5.66□□□□□ -1.5
CAPN3-212ENST00000564503 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP5.66□□□□□ -1.5
CAPN3-212ENST00000564503 IVNS1ABPQ9Y6Y0 642 aa5.66□□□□□ -1.5
CAPN3-212ENST00000564503 NRXN3Q9Y4C0 1643 aa5.66□□□□□ -1.5
CAPN3-212ENST00000564503 MSH6P52701 1360 aa5.66□□□□□ -1.5
CAPN3-212ENST00000564503 EPB41L2O43491 1005 aaKnown RBP5.65□□□□□ -1.5
CAPN3-212ENST00000564503 RNGTTO60942 597 aaKnown RBP5.65□□□□□ -1.5
CAPN3-212ENST00000564503 HMMRO75330 724 aa5.65□□□□□ -1.5
CAPN3-212ENST00000564503 TPM3P06753 285 aa5.65□□□□□ -1.5
CAPN3-212ENST00000564503 NME2P22392 152 aa5.65□□□□□ -1.5
CAPN3-212ENST00000564503 GTF2F1P35269 517 aaKnown RBP eCLIP5.65□□□□□ -1.5
CAPN3-212ENST00000564503 ANAPC15P60006 121 aa5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms