RNA–Protein interactions for RNA: ENST00000563623.5

ABCA3-203, Transcript of ATP binding cassette subfamily A member 3, humanhuman

TSL 1 (best)

Gene ABCA3, Length 3,649 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-203ENST00000563623 ZNF658Q5TYW1 1059 aaPredicted RBP13.25□□□□□ -0.29
ABCA3-203ENST00000563623 TTC19Q6DKK2 380 aaPredicted RBP13.25□□□□□ -0.29
ABCA3-203ENST00000563623 HEATR3Q7Z4Q2 680 aa13.25□□□□□ -0.29
ABCA3-203ENST00000563623 HNRNPLLQ8WVV9 542 aaKnown RBP13.25□□□□□ -0.29
ABCA3-203ENST00000563623 HAUS4Q9H6D7 363 aa13.25□□□□□ -0.29
ABCA3-203ENST00000563623 LIMA1Q9UHB6 759 aaKnown RBP13.25□□□□□ -0.29
ABCA3-203ENST00000563623 SCG2P13521 617 aa13.24□□□□□ -0.29
ABCA3-203ENST00000563623 TUBB4BP68371 445 aa13.24□□□□□ -0.29
ABCA3-203ENST00000563623 ASIC1P78348 528 aa13.24□□□□□ -0.29
ABCA3-203ENST00000563623 SPATA20Q8TB22 786 aa13.24□□□□□ -0.29
ABCA3-203ENST00000563623 SHISA4Q96DD7 197 aa13.24□□□□□ -0.29
ABCA3-203ENST00000563623 RAB21Q9UL25 225 aa13.24□□□□□ -0.29
ABCA3-203ENST00000563623 SEMA3EO15041 775 aa13.24□□□□□ -0.29
ABCA3-203ENST00000563623 KIF5AQ12840 1032 aa13.24□□□□□ -0.29
ABCA3-203ENST00000563623 CAVIN4Q5BKX8 364 aa13.24□□□□□ -0.29
ABCA3-203ENST00000563623 SRBD1Q8N5C6 995 aaKnown RBP13.24□□□□□ -0.29
ABCA3-203ENST00000563623 CARD10Q9BWT7 1032 aa13.24□□□□□ -0.29
ABCA3-203ENST00000563623 H7C1D1 291 aa13.24□□□□□ -0.29
ABCA3-203ENST00000563623 CALM1P0DP23 149 aa13.24□□□□□ -0.29
ABCA3-203ENST00000563623 CALM2P0DP24 149 aa13.24□□□□□ -0.29
ABCA3-203ENST00000563623 CALM3P0DP25 149 aa13.24□□□□□ -0.29
ABCA3-203ENST00000563623 PBX1P40424 430 aa13.24□□□□□ -0.29
ABCA3-203ENST00000563623 EVX2Q03828 476 aa13.24□□□□□ -0.29
ABCA3-203ENST00000563623 CKAP4Q07065 602 aaKnown RBP13.24□□□□□ -0.29
ABCA3-203ENST00000563623 SND1Q7KZF4 910 aaKnown RBP eCLIP13.24□□□□□ -0.29
ABCA3-203ENST00000563623 MB21D1Q8N884 522 aa13.24□□□□□ -0.29
ABCA3-203ENST00000563623 ACSBG1Q96GR2 724 aa13.24□□□□□ -0.29
ABCA3-203ENST00000563623 CCDC42Q96M95 316 aa13.24□□□□□ -0.29
ABCA3-203ENST00000563623 FGFR2P21802 821 aa13.23□□□□□ -0.29
ABCA3-203ENST00000563623 KLK7P49862 253 aa13.23□□□□□ -0.29
ABCA3-203ENST00000563623 ATP2C1P98194 919 aaPredicted RBP13.23□□□□□ -0.29
ABCA3-203ENST00000563623 INF2Q27J81 1249 aa13.23□□□□□ -0.29
ABCA3-203ENST00000563623 ANKRD13CQ8N6S4 541 aa13.23□□□□□ -0.29
ABCA3-203ENST00000563623 ZNF622Q969S3 477 aaKnown RBP eCLIP13.23□□□□□ -0.29
ABCA3-203ENST00000563623 TANGO6Q9C0B7 1094 aa13.23□□□□□ -0.29
ABCA3-203ENST00000563623 KAT14Q9H8E8 782 aa13.23□□□□□ -0.29
ABCA3-203ENST00000563623 AGPAT5Q9NUQ2 364 aa13.23□□□□□ -0.29
ABCA3-203ENST00000563623 CYP2D6P10635 497 aa13.23□□□□□ -0.29
ABCA3-203ENST00000563623 MCM3P25205 808 aa13.23□□□□□ -0.29
ABCA3-203ENST00000563623 SEC23AQ15436 765 aa13.23□□□□□ -0.29
ABCA3-203ENST00000563623 TMTC3Q6ZXV5 915 aa13.23□□□□□ -0.29
ABCA3-203ENST00000563623 SH3RF1Q7Z6J0 888 aa13.23□□□□□ -0.29
ABCA3-203ENST00000563623 SMCR8Q8TEV9 937 aaPredicted RBP13.23□□□□□ -0.29
ABCA3-203ENST00000563623 MYCBPQ99417 103 aaPredicted RBP13.23□□□□□ -0.29
ABCA3-203ENST00000563623 MMRN2Q9H8L6 949 aa13.23□□□□□ -0.29
ABCA3-203ENST00000563623 VAT1LQ9HCJ6 419 aa13.23□□□□□ -0.29
ABCA3-203ENST00000563623 MYO1AQ9UBC5 1043 aa13.23□□□□□ -0.29
ABCA3-203ENST00000563623 DUSP10Q9Y6W6 482 aa13.23□□□□□ -0.29
ABCA3-203ENST00000563623 AKR1B10O60218 316 aa13.22□□□□□ -0.29
ABCA3-203ENST00000563623 TUBBP07437 444 aa13.22□□□□□ -0.29
ABCA3-203ENST00000563623 CYP19A1P11511 503 aaPredicted RBP13.22□□□□□ -0.29
ABCA3-203ENST00000563623 CXCR5P32302 372 aa13.22□□□□□ -0.29
ABCA3-203ENST00000563623 USP14P54578 494 aa13.22□□□□□ -0.29
ABCA3-203ENST00000563623 PDE4DQ08499 809 aa13.22□□□□□ -0.29
ABCA3-203ENST00000563623 TTC31Q49AM3 519 aaPredicted RBP13.22□□□□□ -0.29
ABCA3-203ENST00000563623 MICALL1Q8N3F8 863 aa13.22□□□□□ -0.29
ABCA3-203ENST00000563623 NOC4LQ9BVI4 516 aaKnown RBP13.22□□□□□ -0.29
ABCA3-203ENST00000563623 PSD3Q9NYI0 1048 aa13.22□□□□□ -0.29
ABCA3-203ENST00000563623 TNS3Q68CZ2 1445 aa13.22□□□□□ -0.29
ABCA3-203ENST00000563623 USP5P45974 858 aa13.22□□□□□ -0.29
ABCA3-203ENST00000563623 CT47A1Q5JQC4 288 aaPredicted RBP13.22□□□□□ -0.29
ABCA3-203ENST00000563623 TUBGCP2Q9BSJ2 902 aa13.22□□□□□ -0.29
ABCA3-203ENST00000563623 MED4Q9NPJ6 270 aa13.22□□□□□ -0.29
ABCA3-203ENST00000563623 EXOC1Q9NV70 894 aa13.22□□□□□ -0.29
ABCA3-203ENST00000563623 PMS1P54277 932 aaKnown RBP13.22□□□□□ -0.29
ABCA3-203ENST00000563623 PPP2R5BQ15173 497 aa13.22□□□□□ -0.29
ABCA3-203ENST00000563623 TYW1BQ6NUM6 668 aa13.22□□□□□ -0.29
ABCA3-203ENST00000563623 KRT26Q7Z3Y9 468 aa13.22□□□□□ -0.29
ABCA3-203ENST00000563623 FAM76AQ8TAV0 307 aa13.22□□□□□ -0.29
ABCA3-203ENST00000563623 PYM1Q9BRP8 204 aaKnown RBP13.22□□□□□ -0.29
ABCA3-203ENST00000563623 FAM207AQ9NSI2 230 aaPredicted RBP13.22□□□□□ -0.29
ABCA3-203ENST00000563623 STX8Q9UNK0 236 aa13.22□□□□□ -0.29
ABCA3-203ENST00000563623 GGCXP38435 758 aa13.21□□□□□ -0.29
ABCA3-203ENST00000563623 SLC7A5Q01650 507 aa13.21□□□□□ -0.29
ABCA3-203ENST00000563623 BLIDQ8IZY5 108 aa13.21□□□□□ -0.29
ABCA3-203ENST00000563623 EHBP1Q8NDI1 1231 aa13.21□□□□□ -0.29
ABCA3-203ENST00000563623 MCM9Q9NXL9 1143 aa13.21□□□□□ -0.29
ABCA3-203ENST00000563623 TFCP2L1Q9NZI6 479 aa13.21□□□□□ -0.29
ABCA3-203ENST00000563623 ITIH6Q6UXX5 1313 aa13.21□□□□□ -0.29
ABCA3-203ENST00000563623 MYH8P13535 1937 aa13.21□□□□□ -0.29
ABCA3-203ENST00000563623 GOLGA6CA6NDK9 693 aa13.21□□□□□ -0.29
ABCA3-203ENST00000563623 GOLGA6BA6NDN3 693 aa13.21□□□□□ -0.29
ABCA3-203ENST00000563623 EIF3CLB5ME19 914 aaKnown RBP13.21□□□□□ -0.29
ABCA3-203ENST00000563623 ZPR1O75312 459 aa13.21□□□□□ -0.29
ABCA3-203ENST00000563623 GOLGA6DP0CG33 693 aa13.21□□□□□ -0.29
ABCA3-203ENST00000563623 CCDC24Q8N4L8 307 aa13.21□□□□□ -0.29
ABCA3-203ENST00000563623 EIF3CQ99613 913 aaKnown RBP13.21□□□□□ -0.29
ABCA3-203ENST00000563623 MTRQ99707 1265 aa13.21□□□□□ -0.29
ABCA3-203ENST00000563623 LACRTQ9GZZ8 138 aa13.21□□□□□ -0.29
ABCA3-203ENST00000563623 MKNK2Q9HBH9 465 aa13.21□□□□□ -0.29
ABCA3-203ENST00000563623 BTG4Q9NY30 223 aa13.21□□□□□ -0.29
ABCA3-203ENST00000563623 GOLGA6AQ9NYA3 693 aa13.21□□□□□ -0.29
ABCA3-203ENST00000563623 PNPLA7Q6ZV29 1317 aa13.21□□□□□ -0.29
ABCA3-203ENST00000563623 ADAMTS3O15072 1205 aa13.21□□□□□ -0.3
ABCA3-203ENST00000563623 USO1O60763 962 aaKnown RBP13.21□□□□□ -0.3
ABCA3-203ENST00000563623 KIF5BP33176 963 aa13.21□□□□□ -0.3
ABCA3-203ENST00000563623 NKX1-1Q15270 411 aaPredicted RBP13.21□□□□□ -0.3
ABCA3-203ENST00000563623 EFCC1Q9HA90 598 aa13.21□□□□□ -0.3
ABCA3-203ENST00000563623 REXO2Q9Y3B8 237 aaKnown RBP13.21□□□□□ -0.3
ABCA3-203ENST00000563623 SPEF2Q9C093 1822 aa13.21□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms