RNA–Protein interactions for RNA: ENST00000562875.5

KARS-203, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 3

Gene KARS, Length 801 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-203ENST00000562875 ZSCAN22P10073 491 aaPredicted RBP9.44□□□□□ -0.9
KARS-203ENST00000562875 ITPKAP23677 461 aa9.44□□□□□ -0.9
KARS-203ENST00000562875 CDC25BP30305 580 aa9.44□□□□□ -0.9
KARS-203ENST00000562875 BAG6P46379 1132 aa9.44□□□□□ -0.9
KARS-203ENST00000562875 UBE2HP62256 183 aa9.44□□□□□ -0.9
KARS-203ENST00000562875 COL9A3Q14050 684 aaPredicted RBP9.44□□□□□ -0.9
KARS-203ENST00000562875 MRPL58Q14197 206 aaKnown RBP9.44□□□□□ -0.9
KARS-203ENST00000562875 VPS53Q5VIR6 699 aa9.44□□□□□ -0.9
KARS-203ENST00000562875 CWC27Q6UX04 472 aaKnown RBP9.44□□□□□ -0.9
KARS-203ENST00000562875 KSR2Q6VAB6 950 aa9.44□□□□□ -0.9
KARS-203ENST00000562875 MTERF4Q7Z6M4 381 aaKnown RBP9.44□□□□□ -0.9
KARS-203ENST00000562875 PI4KAP1Q8N8J0 262 aa9.44□□□□□ -0.9
KARS-203ENST00000562875 PI4K2BQ8TCG2 481 aa9.44□□□□□ -0.9
KARS-203ENST00000562875 PDLIM2Q96JY6 352 aa9.44□□□□□ -0.9
KARS-203ENST00000562875 MAP7D2Q96T17 732 aa9.44□□□□□ -0.9
KARS-203ENST00000562875 UPF3BQ9BZI7 483 aaKnown RBP9.44□□□□□ -0.9
KARS-203ENST00000562875 TM6SF1Q9BZW5 370 aa9.44□□□□□ -0.9
KARS-203ENST00000562875 PALD1Q9ULE6 856 aa9.44□□□□□ -0.9
KARS-203ENST00000562875 AKAP2Q9Y2D5 859 aa9.44□□□□□ -0.9
KARS-203ENST00000562875 ZDHHC9Q9Y397 364 aa9.44□□□□□ -0.9
KARS-203ENST00000562875 SNX14Q9Y5W7 946 aa9.44□□□□□ -0.9
KARS-203ENST00000562875 PLEKHG2Q9H7P9 1386 aa9.44□□□□□ -0.9
KARS-203ENST00000562875 PARP4Q9UKK3 1724 aaKnown RBP9.44□□□□□ -0.9
KARS-203ENST00000562875 GOLGA6L6A8MZA4 724 aa9.43□□□□□ -0.9
KARS-203ENST00000562875 RNMTO43148 476 aaKnown RBP9.43□□□□□ -0.9
KARS-203ENST00000562875 XRCC5P13010 732 aaKnown RBP9.43□□□□□ -0.9
KARS-203ENST00000562875 CASTP20810 708 aaKnown RBP9.43□□□□□ -0.9
KARS-203ENST00000562875 EPHA1P21709 976 aa9.43□□□□□ -0.9
KARS-203ENST00000562875 CABP4P57796 275 aa9.43□□□□□ -0.9
KARS-203ENST00000562875 LINC00114Q6XXX2 140 aa9.43□□□□□ -0.9
KARS-203ENST00000562875 VN1R5Q7Z5H4 357 aa9.43□□□□□ -0.9
KARS-203ENST00000562875 DMRTC2Q8IXT2 367 aaPredicted RBP9.43□□□□□ -0.9
KARS-203ENST00000562875 USHBP1Q8N6Y0 703 aa9.43□□□□□ -0.9
KARS-203ENST00000562875 CHMP4CQ96CF2 233 aa9.43□□□□□ -0.9
KARS-203ENST00000562875 PDRG1Q9NUG6 133 aa9.43□□□□□ -0.9
KARS-203ENST00000562875 KIAA1522Q9P206 1035 aaPredicted RBP9.43□□□□□ -0.9
KARS-203ENST00000562875 MKL2Q9ULH7 1088 aa9.43□□□□□ -0.9
KARS-203ENST00000562875 ZKSCAN5Q9Y2L8 839 aa9.43□□□□□ -0.9
KARS-203ENST00000562875 PPME1Q9Y570 386 aa9.43□□□□□ -0.9
KARS-203ENST00000562875 LAMA4Q16363 1823 aa9.42□□□□□ -0.9
KARS-203ENST00000562875 SPEF2Q9C093 1822 aa9.42□□□□□ -0.9
KARS-203ENST00000562875 ALS2Q96Q42 1657 aa9.42□□□□□ -0.9
KARS-203ENST00000562875 ADCY9O60503 1353 aa9.42□□□□□ -0.9
KARS-203ENST00000562875 RFX7Q2KHR2 1363 aa9.42□□□□□ -0.9
KARS-203ENST00000562875 MAP4K4O95819 1239 aaPredicted RBP9.42□□□□□ -0.9
KARS-203ENST00000562875 F13A1P00488 732 aa9.42□□□□□ -0.9
KARS-203ENST00000562875 AK2P54819 239 aa9.42□□□□□ -0.9
KARS-203ENST00000562875 PTPN12Q05209 780 aaKnown RBP9.42□□□□□ -0.9
KARS-203ENST00000562875 KRT32Q14532 448 aa9.42□□□□□ -0.9
KARS-203ENST00000562875 TRAPPC3LQ5T215 181 aa9.42□□□□□ -0.9
KARS-203ENST00000562875 C3orf58Q8NDZ4 430 aa9.42□□□□□ -0.9
KARS-203ENST00000562875 LINS1Q8NG48 757 aa9.42□□□□□ -0.9
KARS-203ENST00000562875 JAKMIP1Q96N16 626 aaKnown RBP9.42□□□□□ -0.9
KARS-203ENST00000562875 LSG1Q9H089 658 aaKnown RBP9.42□□□□□ -0.9
KARS-203ENST00000562875 ZNF576Q9H609 170 aa9.42□□□□□ -0.9
KARS-203ENST00000562875 HMG20BQ9P0W2 317 aa9.42□□□□□ -0.9
KARS-203ENST00000562875 MAP3K2Q9Y2U5 619 aa9.42□□□□□ -0.9
KARS-203ENST00000562875 PKD1L3Q7Z443 1732 aa9.42□□□□□ -0.9
KARS-203ENST00000562875 RPAP1Q9BWH6 1393 aaPredicted RBP9.41□□□□□ -0.9
KARS-203ENST00000562875 CCDC171Q6TFL3 1326 aa9.41□□□□□ -0.9
KARS-203ENST00000562875 H3BRJ5 948 aa9.41□□□□□ -0.9
KARS-203ENST00000562875 LINC01387J3KSC0 135 aa9.41□□□□□ -0.9
KARS-203ENST00000562875 GNB5O14775 395 aa9.41□□□□□ -0.9
KARS-203ENST00000562875 CTSHP09668 335 aa9.41□□□□□ -0.9
KARS-203ENST00000562875 NBPF6Q5VWK0 638 aa9.41□□□□□ -0.9
KARS-203ENST00000562875 TXNDC11Q6PKC3 985 aa9.41□□□□□ -0.9
KARS-203ENST00000562875 PODNQ7Z5L7 613 aa9.41□□□□□ -0.9
KARS-203ENST00000562875 USP48Q86UV5 1035 aa9.41□□□□□ -0.9
KARS-203ENST00000562875 AACSQ86V21 672 aa9.41□□□□□ -0.9
KARS-203ENST00000562875 UNC5CLQ8IV45 518 aa9.41□□□□□ -0.9
KARS-203ENST00000562875 TRIM11Q96F44 468 aa9.41□□□□□ -0.9
KARS-203ENST00000562875 CRELD1Q96HD1 420 aa9.41□□□□□ -0.9
KARS-203ENST00000562875 NBPF4Q96M43 638 aa9.41□□□□□ -0.9
KARS-203ENST00000562875 CLEC4MQ9H2X3 399 aaPredicted RBP9.41□□□□□ -0.9
KARS-203ENST00000562875 ZFYVE1Q9HBF4 777 aa9.41□□□□□ -0.9
KARS-203ENST00000562875 MRC1P22897 1456 aa9.4□□□□□ -0.9
KARS-203ENST00000562875 GOLGA6L4A6NEF3 574 aa9.4□□□□□ -0.9
KARS-203ENST00000562875 GRM8O00222 908 aa9.4□□□□□ -0.9
KARS-203ENST00000562875 PIK3R2O00459 728 aa9.4□□□□□ -0.9
KARS-203ENST00000562875 NBPF7P0C2Y1 421 aaPredicted RBP9.4□□□□□ -0.9
KARS-203ENST00000562875 VAMP1P23763 118 aa9.4□□□□□ -0.9
KARS-203ENST00000562875 KRT85P78386 507 aa9.4□□□□□ -0.9
KARS-203ENST00000562875 PCDH1Q08174 1060 aa9.4□□□□□ -0.9
KARS-203ENST00000562875 IKBKEQ14164 716 aa9.4□□□□□ -0.9
KARS-203ENST00000562875 TSNAXIP1Q2TAA8 658 aa9.4□□□□□ -0.9
KARS-203ENST00000562875 DNTTIP2Q5QJE6 756 aaKnown RBP9.4□□□□□ -0.9
KARS-203ENST00000562875 FAM117BQ6P1L5 589 aa9.4□□□□□ -0.9
KARS-203ENST00000562875 RUFY3Q7L099 469 aa9.4□□□□□ -0.9
KARS-203ENST00000562875 ANKRD24Q8TF21 1146 aa9.4□□□□□ -0.9
KARS-203ENST00000562875 UBE2Q2Q8WVN8 375 aa9.4□□□□□ -0.9
KARS-203ENST00000562875 TTC14Q96N46 770 aa9.4□□□□□ -0.9
KARS-203ENST00000562875 FSD1Q9BTV5 496 aa9.4□□□□□ -0.9
KARS-203ENST00000562875 DDX21Q9NR30 783 aaKnown RBP eCLIP9.4□□□□□ -0.9
KARS-203ENST00000562875 KIF3AQ9Y496 699 aa9.4□□□□□ -0.9
KARS-203ENST00000562875 MYH7P12883 1935 aa9.39□□□□□ -0.91
KARS-203ENST00000562875 CNTNAP5Q8WYK1 1306 aa9.39□□□□□ -0.91
KARS-203ENST00000562875 GJB2P29033 226 aa9.39□□□□□ -0.91
KARS-203ENST00000562875 CHAF1AQ13111 956 aaPredicted RBP9.39□□□□□ -0.91
KARS-203ENST00000562875 RPS26P11Q5JNZ5 115 aaPredicted RBP9.39□□□□□ -0.91
KARS-203ENST00000562875 BLOC1S2Q6QNY1 142 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms