RNA–Protein interactions for RNA: ENST00000562747.1

CDT1-202, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

TSL 2

Gene CDT1, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-202ENST00000562747 TOMM22Q9NS69 142 aa19.57■□□□□ 0.72
CDT1-202ENST00000562747 ZNF236Q9UL36 1845 aa19.57■□□□□ 0.72
CDT1-202ENST00000562747 LTBP2Q14767 1821 aa19.56■□□□□ 0.72
CDT1-202ENST00000562747 SPDYE16A6NNV3 312 aaPredicted RBP19.56■□□□□ 0.72
CDT1-202ENST00000562747 RRP12Q5JTH9 1297 aaKnown RBP19.56■□□□□ 0.72
CDT1-202ENST00000562747 F5H6K3 240 aa19.55■□□□□ 0.72
CDT1-202ENST00000562747 NOVP48745 357 aa19.55■□□□□ 0.72
CDT1-202ENST00000562747 KLRC3Q07444 240 aa19.55■□□□□ 0.72
CDT1-202ENST00000562747 WDR78Q5VTH9 848 aa19.55■□□□□ 0.72
CDT1-202ENST00000562747 GMCL1P1Q8NEA9 526 aa19.55■□□□□ 0.72
CDT1-202ENST00000562747 CWC22Q9HCG8 908 aaKnown RBP19.55■□□□□ 0.72
CDT1-202ENST00000562747 IL17RBQ9NRM6 502 aa19.55■□□□□ 0.72
CDT1-202ENST00000562747 TCP11L1Q9NUJ3 509 aa19.55■□□□□ 0.72
CDT1-202ENST00000562747 SLC15A5A6NIM6 579 aa19.54■□□□□ 0.72
CDT1-202ENST00000562747 RAD21O60216 631 aa19.54■□□□□ 0.72
CDT1-202ENST00000562747 FLOT1O75955 427 aa19.54■□□□□ 0.72
CDT1-202ENST00000562747 NDUFB10O96000 172 aa19.54■□□□□ 0.72
CDT1-202ENST00000562747 PTPREP23469 700 aa19.54■□□□□ 0.72
CDT1-202ENST00000562747 DSG3P32926 999 aa19.54■□□□□ 0.72
CDT1-202ENST00000562747 MDM2Q00987 491 aaPredicted RBP19.54■□□□□ 0.72
CDT1-202ENST00000562747 TRPV1Q8NER1 839 aa19.54■□□□□ 0.72
CDT1-202ENST00000562747 NPLOC4Q8TAT6 608 aa19.54■□□□□ 0.72
CDT1-202ENST00000562747 ESR2Q92731 530 aa19.54■□□□□ 0.72
CDT1-202ENST00000562747 STX8Q9UNK0 236 aa19.54■□□□□ 0.72
CDT1-202ENST00000562747 IGHA2P01877 340 aa19.53■□□□□ 0.72
CDT1-202ENST00000562747 CCNA1P78396 465 aa19.53■□□□□ 0.72
CDT1-202ENST00000562747 PTH1RQ03431 593 aa19.53■□□□□ 0.72
CDT1-202ENST00000562747 GRB14Q14449 540 aa19.53■□□□□ 0.72
CDT1-202ENST00000562747 FAM83BQ5T0W9 1011 aa19.53■□□□□ 0.72
CDT1-202ENST00000562747 LRRC47Q8N1G4 583 aaKnown RBP19.53■□□□□ 0.72
CDT1-202ENST00000562747 MB21D1Q8N884 522 aa19.53■□□□□ 0.72
CDT1-202ENST00000562747 MTMR10Q9NXD2 777 aa19.53■□□□□ 0.72
CDT1-202ENST00000562747 U3KPZ7 1027 aaPredicted RBP19.53■□□□□ 0.72
CDT1-202ENST00000562747 PARP14Q460N5 1801 aa19.53■□□□□ 0.72
CDT1-202ENST00000562747 NEDD4P46934 1319 aa19.52■□□□□ 0.72
CDT1-202ENST00000562747 NMT2O60551 498 aa19.52■□□□□ 0.72
CDT1-202ENST00000562747 HOXC6P09630 235 aa19.52■□□□□ 0.72
CDT1-202ENST00000562747 CYP2C19P33261 490 aa19.52■□□□□ 0.72
CDT1-202ENST00000562747 MFSD14CQ5VZR4 134 aa19.52■□□□□ 0.72
CDT1-202ENST00000562747 ESYT1Q9BSJ8 1104 aa19.52■□□□□ 0.72
CDT1-202ENST00000562747 DDX20Q9UHI6 824 aaKnown RBP19.52■□□□□ 0.72
CDT1-202ENST00000562747 DNAH12Q6ZR08 3092 aa19.51■□□□□ 0.71
CDT1-202ENST00000562747 KIAA1211Q6ZU35 1233 aa19.51■□□□□ 0.71
CDT1-202ENST00000562747 MAP4K1Q92918 833 aa19.51■□□□□ 0.71
CDT1-202ENST00000562747 SENP6Q9GZR1 1112 aaPredicted RBP19.51■□□□□ 0.71
CDT1-202ENST00000562747 CNNM2Q9H8M5 875 aa19.51■□□□□ 0.71
CDT1-202ENST00000562747 PPP1R9AQ9ULJ8 1098 aa19.51■□□□□ 0.71
CDT1-202ENST00000562747 ADAMTS5Q9UNA0 930 aa19.51■□□□□ 0.71
CDT1-202ENST00000562747 STXBP5LQ9Y2K9 1186 aa19.51■□□□□ 0.71
CDT1-202ENST00000562747 CYBAP13498 195 aa19.5■□□□□ 0.71
CDT1-202ENST00000562747 SLFN13Q68D06 897 aa19.5■□□□□ 0.71
CDT1-202ENST00000562747 CASC1Q6TDU7 716 aa19.5■□□□□ 0.71
CDT1-202ENST00000562747 ATG4CQ96DT6 458 aa19.5■□□□□ 0.71
CDT1-202ENST00000562747 GMCL1Q96IK5 515 aa19.5■□□□□ 0.71
CDT1-202ENST00000562747 TTC14Q96N46 770 aa19.5■□□□□ 0.71
CDT1-202ENST00000562747 NUP88Q99567 741 aaPredicted RBP19.5■□□□□ 0.71
CDT1-202ENST00000562747 KRT23Q9C075 422 aa19.5■□□□□ 0.71
CDT1-202ENST00000562747 CDC45O75419 566 aa19.49■□□□□ 0.71
CDT1-202ENST00000562747 TOP1P11387 765 aaKnown RBP19.49■□□□□ 0.71
CDT1-202ENST00000562747 CNGA1P29973 690 aa19.49■□□□□ 0.71
CDT1-202ENST00000562747 ATN1P54259 1190 aaPredicted RBP19.49■□□□□ 0.71
CDT1-202ENST00000562747 CCDC178Q5BJE1 867 aa19.49■□□□□ 0.71
CDT1-202ENST00000562747 IQCA1Q86XH1 822 aa19.49■□□□□ 0.71
CDT1-202ENST00000562747 SLF1Q9BQI6 1058 aa19.49■□□□□ 0.71
CDT1-202ENST00000562747 MOV10L1Q9BXT6 1211 aaKnown RBP19.49■□□□□ 0.71
CDT1-202ENST00000562747 FBXO28Q9NVF7 368 aa19.49■□□□□ 0.71
CDT1-202ENST00000562747 FEM1BQ9UK73 627 aa19.49■□□□□ 0.71
CDT1-202ENST00000562747 IVNS1ABPQ9Y6Y0 642 aa19.49■□□□□ 0.71
CDT1-202ENST00000562747 CUL9Q8IWT3 2517 aa19.49■□□□□ 0.71
CDT1-202ENST00000562747 B4E1Z4 1266 aa19.48■□□□□ 0.71
CDT1-202ENST00000562747 KDM4AO75164 1064 aa19.48■□□□□ 0.71
CDT1-202ENST00000562747 CYP21A2P08686 494 aa19.48■□□□□ 0.71
CDT1-202ENST00000562747 BMP3P12645 472 aa19.48■□□□□ 0.71
CDT1-202ENST00000562747 PRPF38AQ8NAV1 312 aaKnown RBP19.48■□□□□ 0.71
CDT1-202ENST00000562747 LSG1Q9H089 658 aaKnown RBP19.48■□□□□ 0.71
CDT1-202ENST00000562747 SPATC1LQ9H0A9 340 aa19.48■□□□□ 0.71
CDT1-202ENST00000562747 A0A0C4DFX4 3053 aa19.47■□□□□ 0.71
CDT1-202ENST00000562747 COL11A1P12107 1806 aaPredicted RBP19.47■□□□□ 0.71
CDT1-202ENST00000562747 DNM1LO00429 736 aa19.47■□□□□ 0.71
CDT1-202ENST00000562747 VWA5AO00534 786 aa19.47■□□□□ 0.71
CDT1-202ENST00000562747 ADORA2AP29274 412 aa19.47■□□□□ 0.71
CDT1-202ENST00000562747 SLC1A4P43007 532 aa19.47■□□□□ 0.71
CDT1-202ENST00000562747 SAMD1Q6SPF0 538 aaPredicted RBP19.47■□□□□ 0.71
CDT1-202ENST00000562747 DGKHQ86XP1 1220 aa19.47■□□□□ 0.71
CDT1-202ENST00000562747 SHCBP1Q8NEM2 672 aa19.47■□□□□ 0.71
CDT1-202ENST00000562747 TMEM47Q9BQJ4 181 aa19.47■□□□□ 0.71
CDT1-202ENST00000562747 ZSWIM5Q9P217 1185 aa19.47■□□□□ 0.71
CDT1-202ENST00000562747 RBM8AQ9Y5S9 174 aaKnown RBP19.47■□□□□ 0.71
CDT1-202ENST00000562747 PLA2G6O60733 806 aa19.46■□□□□ 0.71
CDT1-202ENST00000562747 MCCP23508 829 aa19.46■□□□□ 0.71
CDT1-202ENST00000562747 RTP1P59025 263 aa19.46■□□□□ 0.71
CDT1-202ENST00000562747 TRDNQ13061 729 aa19.46■□□□□ 0.71
CDT1-202ENST00000562747 TMEM132BQ14DG7 1078 aa19.46■□□□□ 0.71
CDT1-202ENST00000562747 GJC2Q5T442 439 aaPredicted RBP19.46■□□□□ 0.71
CDT1-202ENST00000562747 ANO1Q5XXA6 986 aa19.46■□□□□ 0.71
CDT1-202ENST00000562747 RCSD1Q6JBY9 416 aa19.46■□□□□ 0.71
CDT1-202ENST00000562747 FAM160B2Q86V87 743 aa19.46■□□□□ 0.71
CDT1-202ENST00000562747 DCAF4Q8WV16 495 aa19.46■□□□□ 0.71
CDT1-202ENST00000562747 GUCD1Q96NT3 240 aa19.46■□□□□ 0.71
CDT1-202ENST00000562747 UNC80Q8N2C7 3258 aa19.46■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms