RNA–Protein interactions for RNA: ENST00000562534.5

USB1-206, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 562 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-206ENST00000562534 PAGR1Q9BTK6 254 aa19.1■□□□□ 0.65
USB1-206ENST00000562534 AGXT2Q9BYV1 514 aa19.1■□□□□ 0.65
USB1-206ENST00000562534 PRDM10Q9NQV6 1147 aa19.1■□□□□ 0.65
USB1-206ENST00000562534 FRMPD2Q68DX3 1309 aaPredicted RBP19.09■□□□□ 0.65
USB1-206ENST00000562534 KIF5BP33176 963 aa19.09■□□□□ 0.65
USB1-206ENST00000562534 ERVK-9P63128 1117 aa19.09■□□□□ 0.65
USB1-206ENST00000562534 ERVK-24P63145 666 aa19.09■□□□□ 0.65
USB1-206ENST00000562534 Q3C1V9 767 aa19.09■□□□□ 0.65
USB1-206ENST00000562534 TTBK2Q6IQ55 1244 aa19.09■□□□□ 0.65
USB1-206ENST00000562534 POTEEQ6S8J3 1075 aa19.09■□□□□ 0.65
USB1-206ENST00000562534 CCAR1Q8IX12 1150 aaKnown RBP19.09■□□□□ 0.65
USB1-206ENST00000562534 NUP133Q8WUM0 1156 aa19.09■□□□□ 0.65
USB1-206ENST00000562534 ALDH8A1Q9H2A2 487 aaPredicted RBP19.09■□□□□ 0.65
USB1-206ENST00000562534 TXNRD2Q9NNW7 524 aa19.09■□□□□ 0.65
USB1-206ENST00000562534 PDRG1Q9NUG6 133 aa19.09■□□□□ 0.65
USB1-206ENST00000562534 PALM3A6NDB9 673 aaPredicted RBP19.08■□□□□ 0.64
USB1-206ENST00000562534 KLRF2D3W0D1 207 aa19.08■□□□□ 0.64
USB1-206ENST00000562534 GOLGA8HP0CJ92 632 aa19.08■□□□□ 0.64
USB1-206ENST00000562534 SLC16A2P36021 539 aa19.08■□□□□ 0.64
USB1-206ENST00000562534 GNAQP50148 359 aa19.08■□□□□ 0.64
USB1-206ENST00000562534 LACTBP83111 547 aaPredicted RBP19.08■□□□□ 0.64
USB1-206ENST00000562534 GRM4Q14833 912 aa19.08■□□□□ 0.64
USB1-206ENST00000562534 PPP2R5BQ15173 497 aa19.08■□□□□ 0.64
USB1-206ENST00000562534 IL27Q8NEV9 243 aa19.08■□□□□ 0.64
USB1-206ENST00000562534 CTCFLQ8NI51 663 aaPredicted RBP19.08■□□□□ 0.64
USB1-206ENST00000562534 UPF3BQ9BZI7 483 aaKnown RBP19.08■□□□□ 0.64
USB1-206ENST00000562534 SLC38A10Q9HBR0 1119 aa19.08■□□□□ 0.64
USB1-206ENST00000562534 BTBD7Q9P203 1132 aa19.08■□□□□ 0.64
USB1-206ENST00000562534 MAD2L2Q9UI95 211 aa19.08■□□□□ 0.64
USB1-206ENST00000562534 PRR12Q9ULL5 1215 aa19.08■□□□□ 0.64
USB1-206ENST00000562534 ATP2A1O14983 1001 aa19.07■□□□□ 0.64
USB1-206ENST00000562534 CNMDO75829 334 aa19.07■□□□□ 0.64
USB1-206ENST00000562534 GNRH1P01148 92 aa19.07■□□□□ 0.64
USB1-206ENST00000562534 SMARCA1P28370 1054 aa19.07■□□□□ 0.64
USB1-206ENST00000562534 OAZ1P54368 228 aa19.07■□□□□ 0.64
USB1-206ENST00000562534 SYDE2Q5VT97 1194 aa19.07■□□□□ 0.64
USB1-206ENST00000562534 FANCBQ8NB91 859 aa19.07■□□□□ 0.64
USB1-206ENST00000562534 BRF1Q92994 677 aa19.07■□□□□ 0.64
USB1-206ENST00000562534 LZTS2Q9BRK4 669 aa19.07■□□□□ 0.64
USB1-206ENST00000562534 UBA5Q9GZZ9 404 aa19.07■□□□□ 0.64
USB1-206ENST00000562534 PNMA2Q9UL42 364 aa19.07■□□□□ 0.64
USB1-206ENST00000562534 ZBTB43O43298 467 aa19.06■□□□□ 0.64
USB1-206ENST00000562534 SLC25A27O95847 323 aa19.06■□□□□ 0.64
USB1-206ENST00000562534 HOXD10P28358 340 aa19.06■□□□□ 0.64
USB1-206ENST00000562534 MAPK4P31152 587 aa19.06■□□□□ 0.64
USB1-206ENST00000562534 STAT3P40763 770 aa19.06■□□□□ 0.64
USB1-206ENST00000562534 PSMC4P43686 418 aa19.06■□□□□ 0.64
USB1-206ENST00000562534 RCAN1P53805 252 aa19.06■□□□□ 0.64
USB1-206ENST00000562534 FCGRTP55899 365 aa19.06■□□□□ 0.64
USB1-206ENST00000562534 EVCP57679 992 aa19.06■□□□□ 0.64
USB1-206ENST00000562534 PLS1Q14651 629 aa19.06■□□□□ 0.64
USB1-206ENST00000562534 TMEM132BQ14DG7 1078 aa19.06■□□□□ 0.64
USB1-206ENST00000562534 ANKRD1Q15327 319 aa19.06■□□□□ 0.64
USB1-206ENST00000562534 APOA5Q6Q788 366 aa19.06■□□□□ 0.64
USB1-206ENST00000562534 RASGRP2Q7LDG7 609 aa19.06■□□□□ 0.64
USB1-206ENST00000562534 SPATC1LQ9H0A9 340 aa19.06■□□□□ 0.64
USB1-206ENST00000562534 BRPF3Q9ULD4 1205 aa19.06■□□□□ 0.64
USB1-206ENST00000562534 KLF18A0A0U1RQI7 1052 aa19.05■□□□□ 0.64
USB1-206ENST00000562534 FMNL1O95466 1100 aaPredicted RBP19.05■□□□□ 0.64
USB1-206ENST00000562534 COPB2P35606 906 aa19.05■□□□□ 0.64
USB1-206ENST00000562534 NEK4P51957 841 aa19.05■□□□□ 0.64
USB1-206ENST00000562534 STAG2Q8N3U4 1231 aa19.05■□□□□ 0.64
USB1-206ENST00000562534 SHCBP1Q8NEM2 672 aa19.05■□□□□ 0.64
USB1-206ENST00000562534 REPS2Q8NFH8 660 aa19.05■□□□□ 0.64
USB1-206ENST00000562534 CD99L2Q8TCZ2 262 aa19.05■□□□□ 0.64
USB1-206ENST00000562534 MROH8Q9H579 483 aa19.05■□□□□ 0.64
USB1-206ENST00000562534 PCNTO95613 3336 aa19.05■□□□□ 0.64
USB1-206ENST00000562534 CCDC196A0A1B0GTZ2 297 aa19.04■□□□□ 0.64
USB1-206ENST00000562534 PEX10O60683 326 aa19.04■□□□□ 0.64
USB1-206ENST00000562534 APOBRQ0VD83 1088 aa19.04■□□□□ 0.64
USB1-206ENST00000562534 TOB2Q14106 344 aaPredicted RBP19.04■□□□□ 0.64
USB1-206ENST00000562534 RIOX2Q8IUF8 465 aa19.04■□□□□ 0.64
USB1-206ENST00000562534 ADGRF4Q8IZF3 695 aa19.04■□□□□ 0.64
USB1-206ENST00000562534 CPXCR1Q8N123 301 aa19.04■□□□□ 0.64
USB1-206ENST00000562534 COA7Q96BR5 231 aa19.04■□□□□ 0.64
USB1-206ENST00000562534 MYL10Q9BUA6 226 aa19.04■□□□□ 0.64
USB1-206ENST00000562534 MOV10L1Q9BXT6 1211 aaKnown RBP19.04■□□□□ 0.64
USB1-206ENST00000562534 TEX13BQ9BXU2 312 aa19.04■□□□□ 0.64
USB1-206ENST00000562534 RANBP17Q9H2T7 1088 aaKnown RBP19.04■□□□□ 0.64
USB1-206ENST00000562534 EFCC1Q9HA90 598 aa19.04■□□□□ 0.64
USB1-206ENST00000562534 VAT1LQ9HCJ6 419 aa19.04■□□□□ 0.64
USB1-206ENST00000562534 RBM28Q9NW13 759 aaKnown RBP19.04■□□□□ 0.64
USB1-206ENST00000562534 ZNF214Q9UL59 606 aaPredicted RBP19.04■□□□□ 0.64
USB1-206ENST00000562534 NAP1L2Q9ULW6 460 aaPredicted RBP19.04■□□□□ 0.64
USB1-206ENST00000562534 STRNO43815 780 aa19.03■□□□□ 0.64
USB1-206ENST00000562534 DHX16O60231 1041 aaKnown RBP19.03■□□□□ 0.64
USB1-206ENST00000562534 ZNF274Q96GC6 653 aaPredicted RBP19.03■□□□□ 0.64
USB1-206ENST00000562534 TBC1D32Q96NH3 1257 aa19.03■□□□□ 0.64
USB1-206ENST00000562534 RIOX1Q9H6W3 641 aa19.03■□□□□ 0.64
USB1-206ENST00000562534 CWC22Q9HCG8 908 aaKnown RBP19.03■□□□□ 0.64
USB1-206ENST00000562534 RAVER2Q9HCJ3 691 aaKnown RBP19.03■□□□□ 0.64
USB1-206ENST00000562534 RLFQ13129 1914 aa19.03■□□□□ 0.64
USB1-206ENST00000562534 TNPO2O14787 897 aaKnown RBP19.02■□□□□ 0.64
USB1-206ENST00000562534 PRMT2P55345 433 aa19.02■□□□□ 0.64
USB1-206ENST00000562534 TRAF1Q13077 416 aa19.02■□□□□ 0.64
USB1-206ENST00000562534 SNRNP48Q6IEG0 339 aaKnown RBP19.02■□□□□ 0.64
USB1-206ENST00000562534 MICU3Q86XE3 530 aa19.02■□□□□ 0.64
USB1-206ENST00000562534 TRIM47Q96LD4 638 aa19.02■□□□□ 0.64
USB1-206ENST00000562534 KIF2CQ99661 725 aa19.02■□□□□ 0.64
USB1-206ENST00000562534 PORCNQ9H237 461 aa19.02■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms