RNA–Protein interactions for RNA: ENST00000562310.1

COMMD4-205, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 568 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-205ENST00000562310 WRNIP1Q96S55 665 aa16.42■□□□□ 0.22
COMMD4-205ENST00000562310 FEZ1Q99689 392 aa16.42■□□□□ 0.22
COMMD4-205ENST00000562310 UBA5Q9GZZ9 404 aa16.42■□□□□ 0.22
COMMD4-205ENST00000562310 JMJD4Q9H9V9 463 aa16.42■□□□□ 0.22
COMMD4-205ENST00000562310 PICK1Q9NRD5 415 aa16.42■□□□□ 0.22
COMMD4-205ENST00000562310 ZBTB5O15062 677 aa16.41■□□□□ 0.22
COMMD4-205ENST00000562310 PLA2G6O60733 806 aa16.41■□□□□ 0.22
COMMD4-205ENST00000562310 NASPP49321 788 aaPredicted RBP16.41■□□□□ 0.22
COMMD4-205ENST00000562310 NAPAP54920 295 aa16.41■□□□□ 0.22
COMMD4-205ENST00000562310 TRAF1Q13077 416 aa16.41■□□□□ 0.22
COMMD4-205ENST00000562310 KRT26Q7Z3Y9 468 aa16.41■□□□□ 0.22
COMMD4-205ENST00000562310 BICD2Q8TD16 824 aa16.41■□□□□ 0.22
COMMD4-205ENST00000562310 KCNG4Q8TDN1 519 aa16.41■□□□□ 0.22
COMMD4-205ENST00000562310 ACER1Q8TDN7 264 aa16.41■□□□□ 0.22
COMMD4-205ENST00000562310 LPAR1Q92633 364 aa16.41■□□□□ 0.22
COMMD4-205ENST00000562310 SHISA4Q96DD7 197 aa16.41■□□□□ 0.22
COMMD4-205ENST00000562310 KIAA1683Q9H0B3 1180 aa16.41■□□□□ 0.22
COMMD4-205ENST00000562310 CPVLQ9H3G5 476 aa16.41■□□□□ 0.22
COMMD4-205ENST00000562310 TAF1DQ9H5J8 278 aaPredicted RBP16.41■□□□□ 0.22
COMMD4-205ENST00000562310 TFIP11Q9UBB9 837 aaKnown RBP16.41■□□□□ 0.22
COMMD4-205ENST00000562310 RCOR1Q9UKL0 485 aa16.41■□□□□ 0.22
COMMD4-205ENST00000562310 NOL7Q9UMY1 257 aaKnown RBP16.41■□□□□ 0.22
COMMD4-205ENST00000562310 PCDHA4Q9UN74 947 aa16.41■□□□□ 0.22
COMMD4-205ENST00000562310 GNA11P29992 359 aa16.4■□□□□ 0.22
COMMD4-205ENST00000562310 INPP5BP32019 993 aa16.4■□□□□ 0.22
COMMD4-205ENST00000562310 NF2P35240 595 aa16.4■□□□□ 0.22
COMMD4-205ENST00000562310 ECE1P42892 770 aa16.4■□□□□ 0.22
COMMD4-205ENST00000562310 USP14P54578 494 aa16.4■□□□□ 0.22
COMMD4-205ENST00000562310 NPY5RQ15761 445 aa16.4■□□□□ 0.22
COMMD4-205ENST00000562310 SYDE2Q5VT97 1194 aa16.4■□□□□ 0.22
COMMD4-205ENST00000562310 ANO1Q5XXA6 986 aa16.4■□□□□ 0.22
COMMD4-205ENST00000562310 TTBK2Q6IQ55 1244 aa16.4■□□□□ 0.22
COMMD4-205ENST00000562310 FAM160B2Q86V87 743 aa16.4■□□□□ 0.22
COMMD4-205ENST00000562310 BLIDQ8IZY5 108 aa16.4■□□□□ 0.22
COMMD4-205ENST00000562310 KLRG1Q96E93 195 aa16.4■□□□□ 0.22
COMMD4-205ENST00000562310 WDR18Q9BV38 432 aa16.4■□□□□ 0.22
COMMD4-205ENST00000562310 ZMYND12Q9H0C1 365 aa16.4■□□□□ 0.22
COMMD4-205ENST00000562310 GLT8D2Q9H1C3 349 aa16.4■□□□□ 0.22
COMMD4-205ENST00000562310 VAT1LQ9HCJ6 419 aa16.4■□□□□ 0.22
COMMD4-205ENST00000562310 C6orf50Q9HD87 102 aa16.4■□□□□ 0.22
COMMD4-205ENST00000562310 GOLGA6L4A6NEF3 574 aa16.39■□□□□ 0.21
COMMD4-205ENST00000562310 TMEM232C9JQI7 657 aa16.39■□□□□ 0.21
COMMD4-205ENST00000562310 WDR46O15213 610 aaKnown RBP16.39■□□□□ 0.21
COMMD4-205ENST00000562310 PPP1R12BO60237 982 aaPredicted RBP16.39■□□□□ 0.21
COMMD4-205ENST00000562310 TRAPPC10P48553 1259 aa16.39■□□□□ 0.21
COMMD4-205ENST00000562310 STAT2P52630 851 aa16.39■□□□□ 0.21
COMMD4-205ENST00000562310 IKQ13123 557 aaPredicted RBP16.39■□□□□ 0.21
COMMD4-205ENST00000562310 NR5A1Q13285 461 aa16.39■□□□□ 0.21
COMMD4-205ENST00000562310 STK38Q15208 465 aa16.39■□□□□ 0.21
COMMD4-205ENST00000562310 JMYQ8N9B5 988 aa16.39■□□□□ 0.21
COMMD4-205ENST00000562310 CHURC1Q8WUH1 139 aa16.39■□□□□ 0.21
COMMD4-205ENST00000562310 TNFRSF25Q93038 417 aa16.39■□□□□ 0.21
COMMD4-205ENST00000562310 SYAP1Q96A49 352 aaPredicted RBP16.39■□□□□ 0.21
COMMD4-205ENST00000562310 CEP131Q9UPN4 1083 aa16.39■□□□□ 0.21
COMMD4-205ENST00000562310 USP17L10C9JJH3 530 aa16.38■□□□□ 0.21
COMMD4-205ENST00000562310 ADM5C9JUS6 153 aa16.38■□□□□ 0.21
COMMD4-205ENST00000562310 BMP15O95972 392 aa16.38■□□□□ 0.21
COMMD4-205ENST00000562310 SLC16A2P36021 539 aa16.38■□□□□ 0.21
COMMD4-205ENST00000562310 CDC37Q16543 378 aaPredicted RBP16.38■□□□□ 0.21
COMMD4-205ENST00000562310 TEX2Q8IWB9 1127 aa16.38■□□□□ 0.21
COMMD4-205ENST00000562310 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.38■□□□□ 0.21
COMMD4-205ENST00000562310 OXER1Q8TDS5 423 aa16.38■□□□□ 0.21
COMMD4-205ENST00000562310 NUP88Q99567 741 aaPredicted RBP16.38■□□□□ 0.21
COMMD4-205ENST00000562310 FEM1BQ9UK73 627 aa16.38■□□□□ 0.21
COMMD4-205ENST00000562310 MORC2Q9Y6X9 1032 aaPredicted RBP16.38■□□□□ 0.21
COMMD4-205ENST00000562310 GADD45BO75293 160 aaPredicted RBP16.37■□□□□ 0.21
COMMD4-205ENST00000562310 VEGFAP15692 232 aaPredicted RBP16.37■□□□□ 0.21
COMMD4-205ENST00000562310 PTPRAP18433 802 aa16.37■□□□□ 0.21
COMMD4-205ENST00000562310 IREB2P48200 963 aaKnown RBP16.37■□□□□ 0.21
COMMD4-205ENST00000562310 ADCY7P51828 1080 aa16.37■□□□□ 0.21
COMMD4-205ENST00000562310 CEBPZQ03701 1054 aaKnown RBP16.37■□□□□ 0.21
COMMD4-205ENST00000562310 SLC39A14Q15043 492 aa16.37■□□□□ 0.21
COMMD4-205ENST00000562310 SF3A1Q15459 793 aaKnown RBP16.37■□□□□ 0.21
COMMD4-205ENST00000562310 QRICH1Q2TAL8 776 aa16.37■□□□□ 0.21
COMMD4-205ENST00000562310 FAM83BQ5T0W9 1011 aa16.37■□□□□ 0.21
COMMD4-205ENST00000562310 PRAMEF18Q5VWM3 479 aa16.37■□□□□ 0.21
COMMD4-205ENST00000562310 TYW1BQ6NUM6 668 aa16.37■□□□□ 0.21
COMMD4-205ENST00000562310 KRT25Q7Z3Z0 450 aa16.37■□□□□ 0.21
COMMD4-205ENST00000562310 SPICE1Q8N0Z3 855 aa16.37■□□□□ 0.21
COMMD4-205ENST00000562310 LINC00301Q8NCQ3 95 aa16.37■□□□□ 0.21
COMMD4-205ENST00000562310 GPT2Q8TD30 523 aa16.37■□□□□ 0.21
COMMD4-205ENST00000562310 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.37■□□□□ 0.21
COMMD4-205ENST00000562310 CLIC4Q9Y696 253 aa16.37■□□□□ 0.21
COMMD4-205ENST00000562310 PARP14Q460N5 1801 aa16.36■□□□□ 0.21
COMMD4-205ENST00000562310 CCDC194A0A1B0GVG4 234 aa16.36■□□□□ 0.21
COMMD4-205ENST00000562310 SMCO2A6NFE2 343 aa16.36■□□□□ 0.21
COMMD4-205ENST00000562310 TRIM75PA6NK02 468 aa16.36■□□□□ 0.21
COMMD4-205ENST00000562310 SPTLC2O15270 562 aa16.36■□□□□ 0.21
COMMD4-205ENST00000562310 MAP3K9P80192 1104 aa16.36■□□□□ 0.21
COMMD4-205ENST00000562310 EAPPQ56P03 285 aaPredicted RBP16.36■□□□□ 0.21
COMMD4-205ENST00000562310 ZNF280CQ8ND82 737 aa16.36■□□□□ 0.21
COMMD4-205ENST00000562310 CDCA5Q96FF9 252 aa16.36■□□□□ 0.21
COMMD4-205ENST00000562310 AMNQ9BXJ7 453 aa16.36■□□□□ 0.21
COMMD4-205ENST00000562310 GLIS2Q9BZE0 524 aaPredicted RBP16.36■□□□□ 0.21
COMMD4-205ENST00000562310 FTOQ9C0B1 505 aaKnown RBP eCLIP16.36■□□□□ 0.21
COMMD4-205ENST00000562310 CSADQ9Y600 493 aa16.36■□□□□ 0.21
COMMD4-205ENST00000562310 C19orf81C9J6K1 198 aa16.35■□□□□ 0.21
COMMD4-205ENST00000562310 M0R2N6 131 aa16.35■□□□□ 0.21
COMMD4-205ENST00000562310 PPP6R2O75170 966 aa16.35■□□□□ 0.21
COMMD4-205ENST00000562310 USP2O75604 605 aaPredicted RBP16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms