RNA–Protein interactions for RNA: ENST00000561956.1

AC009054.2-201, humanhuman

TSL 3 BASIC

Gene AC009054.2, Length 374 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009054.2-201ENST00000561956 KRT40Q6A162 431 aa12.54□□□□□ -0.4
AC009054.2-201ENST00000561956 OTUD7BQ6GQQ9 843 aa12.54□□□□□ -0.4
AC009054.2-201ENST00000561956 ADGRF4Q8IZF3 695 aa12.54□□□□□ -0.4
AC009054.2-201ENST00000561956 FOXD4L4Q8WXT5 416 aaPredicted RBP12.54□□□□□ -0.4
AC009054.2-201ENST00000561956 SHISA4Q96DD7 197 aa12.54□□□□□ -0.4
AC009054.2-201ENST00000561956 RRP36Q96EU6 259 aaKnown RBP12.54□□□□□ -0.4
AC009054.2-201ENST00000561956 C12orf42Q96LP6 360 aa12.54□□□□□ -0.4
AC009054.2-201ENST00000561956 JMJD4Q9H9V9 463 aa12.54□□□□□ -0.4
AC009054.2-201ENST00000561956 GJB4Q9NTQ9 266 aa12.54□□□□□ -0.4
AC009054.2-201ENST00000561956 ISY1Q9ULR0 285 aaKnown RBP12.54□□□□□ -0.4
AC009054.2-201ENST00000561956 AFG3L2Q9Y4W6 797 aa12.54□□□□□ -0.4
AC009054.2-201ENST00000561956 LOC285556D6RIA3 1793 aa12.53□□□□□ -0.4
AC009054.2-201ENST00000561956 MYH15Q9Y2K3 1946 aa12.53□□□□□ -0.4
AC009054.2-201ENST00000561956 SPDYE5A6NIY4 337 aa12.53□□□□□ -0.4
AC009054.2-201ENST00000561956 TRIM75PA6NK02 468 aa12.53□□□□□ -0.4
AC009054.2-201ENST00000561956 TMEM232C9JQI7 657 aa12.53□□□□□ -0.4
AC009054.2-201ENST00000561956 PLA2G6O60733 806 aa12.53□□□□□ -0.4
AC009054.2-201ENST00000561956 ITGBL1O95965 494 aaPredicted RBP12.53□□□□□ -0.4
AC009054.2-201ENST00000561956 FKBP1BP68106 108 aa12.53□□□□□ -0.4
AC009054.2-201ENST00000561956 RESTQ13127 1097 aa12.53□□□□□ -0.4
AC009054.2-201ENST00000561956 TRIM29Q14134 588 aa12.53□□□□□ -0.4
AC009054.2-201ENST00000561956 SYDE2Q5VT97 1194 aa12.53□□□□□ -0.4
AC009054.2-201ENST00000561956 PIBF1Q8WXW3 757 aa12.53□□□□□ -0.4
AC009054.2-201ENST00000561956 CLMNQ96JQ2 1002 aa12.53□□□□□ -0.4
AC009054.2-201ENST00000561956 PIGSQ96S52 555 aa12.53□□□□□ -0.4
AC009054.2-201ENST00000561956 ZNF408Q9H9D4 720 aa12.53□□□□□ -0.4
AC009054.2-201ENST00000561956 ELP3Q9H9T3 547 aa12.53□□□□□ -0.4
AC009054.2-201ENST00000561956 EMILIN3Q9NT22 766 aa12.53□□□□□ -0.4
AC009054.2-201ENST00000561956 SEC63Q9UGP8 760 aaKnown RBP12.53□□□□□ -0.4
AC009054.2-201ENST00000561956 PARP14Q460N5 1801 aa12.53□□□□□ -0.4
AC009054.2-201ENST00000561956 C19orf81C9J6K1 198 aa12.52□□□□□ -0.41
AC009054.2-201ENST00000561956 STXBP3O00186 592 aa12.52□□□□□ -0.41
AC009054.2-201ENST00000561956 XBP1P17861 261 aa12.52□□□□□ -0.41
AC009054.2-201ENST00000561956 VCAM1P19320 739 aa12.52□□□□□ -0.41
AC009054.2-201ENST00000561956 STAT2P52630 851 aa12.52□□□□□ -0.41
AC009054.2-201ENST00000561956 PPATQ06203 517 aa12.52□□□□□ -0.41
AC009054.2-201ENST00000561956 SH3D19Q5HYK7 790 aa12.52□□□□□ -0.41
AC009054.2-201ENST00000561956 WWC2Q6AWC2 1192 aa12.52□□□□□ -0.41
AC009054.2-201ENST00000561956 CLEC17AQ6ZS10 378 aa12.52□□□□□ -0.41
AC009054.2-201ENST00000561956 FERMT3Q86UX7 667 aa12.52□□□□□ -0.41
AC009054.2-201ENST00000561956 FAM160B2Q86V87 743 aa12.52□□□□□ -0.41
AC009054.2-201ENST00000561956 ERO1BQ86YB8 467 aa12.52□□□□□ -0.41
AC009054.2-201ENST00000561956 HOMER1Q86YM7 354 aa12.52□□□□□ -0.41
AC009054.2-201ENST00000561956 FAM177A1Q8N128 213 aaPredicted RBP12.52□□□□□ -0.41
AC009054.2-201ENST00000561956 RBM46Q8TBY0 533 aaKnown RBP12.52□□□□□ -0.41
AC009054.2-201ENST00000561956 CHURC1Q8WUH1 139 aa12.52□□□□□ -0.41
AC009054.2-201ENST00000561956 GPBP1L1Q9HC44 474 aaPredicted RBP12.52□□□□□ -0.41
AC009054.2-201ENST00000561956 GBA2Q9HCG7 927 aaPredicted RBP12.52□□□□□ -0.41
AC009054.2-201ENST00000561956 VAT1LQ9HCJ6 419 aa12.52□□□□□ -0.41
AC009054.2-201ENST00000561956 SH3GLB2Q9NR46 395 aa12.52□□□□□ -0.41
AC009054.2-201ENST00000561956 VPS54Q9P1Q0 977 aa12.52□□□□□ -0.41
AC009054.2-201ENST00000561956 FEM1BQ9UK73 627 aa12.52□□□□□ -0.41
AC009054.2-201ENST00000561956 PNMA6FA0A0J9YX94 578 aa12.51□□□□□ -0.41
AC009054.2-201ENST00000561956 hCG_1984214I3L0E3 225 aa12.51□□□□□ -0.41
AC009054.2-201ENST00000561956 ZBTB5O15062 677 aa12.51□□□□□ -0.41
AC009054.2-201ENST00000561956 CELF2O95319 508 aaKnown RBP12.51□□□□□ -0.41
AC009054.2-201ENST00000561956 MMP1P03956 469 aa12.51□□□□□ -0.41
AC009054.2-201ENST00000561956 HMGCS2P54868 508 aa12.51□□□□□ -0.41
AC009054.2-201ENST00000561956 KIF23Q02241 960 aaPredicted RBP12.51□□□□□ -0.41
AC009054.2-201ENST00000561956 IKQ13123 557 aaPredicted RBP12.51□□□□□ -0.41
AC009054.2-201ENST00000561956 PPIL2Q13356 520 aa12.51□□□□□ -0.41
AC009054.2-201ENST00000561956 DGKZQ13574 1117 aa12.51□□□□□ -0.41
AC009054.2-201ENST00000561956 CDC37Q16543 378 aaPredicted RBP12.51□□□□□ -0.41
AC009054.2-201ENST00000561956 TYW1BQ6NUM6 668 aa12.51□□□□□ -0.41
AC009054.2-201ENST00000561956 HEATR3Q7Z4Q2 680 aa12.51□□□□□ -0.41
AC009054.2-201ENST00000561956 ZNF713Q8N859 430 aaPredicted RBP12.51□□□□□ -0.41
AC009054.2-201ENST00000561956 GPKOWQ92917 476 aaPredicted RBP eCLIP12.51□□□□□ -0.41
AC009054.2-201ENST00000561956 PHF20Q9BVI0 1012 aa12.51□□□□□ -0.41
AC009054.2-201ENST00000561956 ZSCAN16Q9H4T2 348 aaPredicted RBP12.51□□□□□ -0.41
AC009054.2-201ENST00000561956 BARHL2Q9NY43 387 aa12.51□□□□□ -0.41
AC009054.2-201ENST00000561956 PRR12Q9ULL5 1215 aa12.51□□□□□ -0.41
AC009054.2-201ENST00000561956 KCNJ14Q9UNX9 436 aa12.51□□□□□ -0.41
AC009054.2-201ENST00000561956 KCNH4Q9UQ05 1017 aa12.51□□□□□ -0.41
AC009054.2-201ENST00000561956 RLFQ13129 1914 aa12.5□□□□□ -0.41
AC009054.2-201ENST00000561956 KIF3CO14782 793 aa12.5□□□□□ -0.41
AC009054.2-201ENST00000561956 PPP1R11O60927 126 aaPredicted RBP12.5□□□□□ -0.41
AC009054.2-201ENST00000561956 SAFBQ15424 915 aaKnown RBP eCLIP12.5□□□□□ -0.41
AC009054.2-201ENST00000561956 NPY5RQ15761 445 aa12.5□□□□□ -0.41
AC009054.2-201ENST00000561956 QRICH1Q2TAL8 776 aa12.5□□□□□ -0.41
AC009054.2-201ENST00000561956 MCTP1Q6DN14 999 aa12.5□□□□□ -0.41
AC009054.2-201ENST00000561956 PPP1R18Q6NYC8 613 aa12.5□□□□□ -0.41
AC009054.2-201ENST00000561956 C2orf69Q8N8R5 385 aa12.5□□□□□ -0.41
AC009054.2-201ENST00000561956 CCDC148Q8NFR7 591 aa12.5□□□□□ -0.41
AC009054.2-201ENST00000561956 OTUD5Q96G74 571 aa12.5□□□□□ -0.41
AC009054.2-201ENST00000561956 RPAP3Q9H6T3 665 aaPredicted RBP12.5□□□□□ -0.41
AC009054.2-201ENST00000561956 FBXO28Q9NVF7 368 aa12.5□□□□□ -0.41
AC009054.2-201ENST00000561956 TMOD4Q9NZQ9 345 aa12.5□□□□□ -0.41
AC009054.2-201ENST00000561956 ATP6V1DQ9Y5K8 247 aa12.5□□□□□ -0.41
AC009054.2-201ENST00000561956 PASKQ96RG2 1323 aa12.49□□□□□ -0.41
AC009054.2-201ENST00000561956 A0A0G2JLL6 359 aaPredicted RBP12.49□□□□□ -0.41
AC009054.2-201ENST00000561956 KIF28PB7ZC32 967 aa12.49□□□□□ -0.41
AC009054.2-201ENST00000561956 CXCL11O14625 94 aa12.49□□□□□ -0.41
AC009054.2-201ENST00000561956 IRF6O14896 467 aa12.49□□□□□ -0.41
AC009054.2-201ENST00000561956 BAG4O95429 457 aaKnown RBP12.49□□□□□ -0.41
AC009054.2-201ENST00000561956 U2AF2P26368 475 aaKnown RBP eCLIP12.49□□□□□ -0.41
AC009054.2-201ENST00000561956 GJA5P36382 358 aa12.49□□□□□ -0.41
AC009054.2-201ENST00000561956 NAPAP54920 295 aa12.49□□□□□ -0.41
AC009054.2-201ENST00000561956 CST9Q5W186 159 aa12.49□□□□□ -0.41
AC009054.2-201ENST00000561956 BRAPQ7Z569 592 aa12.49□□□□□ -0.41
AC009054.2-201ENST00000561956 PRRT2Q7Z6L0 340 aaPredicted RBP12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms