RNA–Protein interactions for RNA: ENST00000561952.1

GINS3-204, Transcript of GINS complex subunit 3, humanhuman

TSL 2

Gene GINS3, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-204ENST00000561952 PPP1R9AQ9ULJ8 1098 aa9.83□□□□□ -0.84
GINS3-204ENST00000561952 MTMR7Q9Y216 660 aa9.83□□□□□ -0.84
GINS3-204ENST00000561952 SALL3Q9BXA9 1300 aa9.82□□□□□ -0.84
GINS3-204ENST00000561952 SMCHD1A6NHR9 2005 aa9.82□□□□□ -0.84
GINS3-204ENST00000561952 TRIM6-TRIM34B2RNG4 842 aa9.82□□□□□ -0.84
GINS3-204ENST00000561952 PPARAQ07869 468 aa9.82□□□□□ -0.84
GINS3-204ENST00000561952 VPS53Q5VIR6 699 aa9.82□□□□□ -0.84
GINS3-204ENST00000561952 CPXCR1Q8N123 301 aa9.82□□□□□ -0.84
GINS3-204ENST00000561952 PLCD3Q8N3E9 789 aa9.82□□□□□ -0.84
GINS3-204ENST00000561952 SHCBP1Q8NEM2 672 aa9.82□□□□□ -0.84
GINS3-204ENST00000561952 EXOC6Q8TAG9 804 aa9.82□□□□□ -0.84
GINS3-204ENST00000561952 KIFC2Q96AC6 838 aa9.82□□□□□ -0.84
GINS3-204ENST00000561952 SLF1Q9BQI6 1058 aa9.82□□□□□ -0.84
GINS3-204ENST00000561952 MROH8Q9H579 483 aa9.82□□□□□ -0.84
GINS3-204ENST00000561952 INCENPQ9NQS7 918 aa9.82□□□□□ -0.84
GINS3-204ENST00000561952 STAP2Q9UGK3 403 aa9.82□□□□□ -0.84
GINS3-204ENST00000561952 DDX20Q9UHI6 824 aaKnown RBP9.82□□□□□ -0.84
GINS3-204ENST00000561952 CTDP1Q9Y5B0 961 aaPredicted RBP9.82□□□□□ -0.84
GINS3-204ENST00000561952 MCM3APO60318 1980 aa9.81□□□□□ -0.84
GINS3-204ENST00000561952 F5H6K3 240 aa9.81□□□□□ -0.84
GINS3-204ENST00000561952 VWA5AO00534 786 aa9.81□□□□□ -0.84
GINS3-204ENST00000561952 STRNO43815 780 aa9.81□□□□□ -0.84
GINS3-204ENST00000561952 SLC3A2P08195 630 aaKnown RBP9.81□□□□□ -0.84
GINS3-204ENST00000561952 HOXC6P09630 235 aa9.81□□□□□ -0.84
GINS3-204ENST00000561952 FCER1AP12319 257 aa9.81□□□□□ -0.84
GINS3-204ENST00000561952 CYBAP13498 195 aa9.81□□□□□ -0.84
GINS3-204ENST00000561952 STAT3P40763 770 aa9.81□□□□□ -0.84
GINS3-204ENST00000561952 PDE1AP54750 535 aa9.81□□□□□ -0.84
GINS3-204ENST00000561952 TFAP4Q01664 338 aa9.81□□□□□ -0.84
GINS3-204ENST00000561952 PDE4BQ07343 736 aa9.81□□□□□ -0.84
GINS3-204ENST00000561952 KLRC3Q07444 240 aa9.81□□□□□ -0.84
GINS3-204ENST00000561952 IKQ13123 557 aaPredicted RBP9.81□□□□□ -0.84
GINS3-204ENST00000561952 LRRC26Q2I0M4 334 aa9.81□□□□□ -0.84
GINS3-204ENST00000561952 GJC2Q5T442 439 aaPredicted RBP9.81□□□□□ -0.84
GINS3-204ENST00000561952 SNRNP48Q6IEG0 339 aaKnown RBP9.81□□□□□ -0.84
GINS3-204ENST00000561952 RASGRP2Q7LDG7 609 aa9.81□□□□□ -0.84
GINS3-204ENST00000561952 RILPL2Q969X0 211 aa9.81□□□□□ -0.84
GINS3-204ENST00000561952 EVI5LQ96CN4 794 aa9.81□□□□□ -0.84
GINS3-204ENST00000561952 FAM227BQ96M60 508 aa9.81□□□□□ -0.84
GINS3-204ENST00000561952 SENP6Q9GZR1 1112 aaPredicted RBP9.81□□□□□ -0.84
GINS3-204ENST00000561952 ZNF287Q9HBT7 754 aa9.81□□□□□ -0.84
GINS3-204ENST00000561952 TOMM22Q9NS69 142 aa9.81□□□□□ -0.84
GINS3-204ENST00000561952 NYAP2Q9P242 653 aa9.81□□□□□ -0.84
GINS3-204ENST00000561952 IGKV6D-41A0A0C4DH26 115 aa9.8□□□□□ -0.84
GINS3-204ENST00000561952 A0A0D9SFI3 127 aa9.8□□□□□ -0.84
GINS3-204ENST00000561952 TSPY2A6NKD2 308 aa9.8□□□□□ -0.84
GINS3-204ENST00000561952 FOXP2O15409 715 aa9.8□□□□□ -0.84
GINS3-204ENST00000561952 NMT2O60551 498 aa9.8□□□□□ -0.84
GINS3-204ENST00000561952 SLC25A27O95847 323 aa9.8□□□□□ -0.84
GINS3-204ENST00000561952 TTLL1O95922 423 aa9.8□□□□□ -0.84
GINS3-204ENST00000561952 CAPN2P17655 700 aa9.8□□□□□ -0.84
GINS3-204ENST00000561952 HDAC1Q13547 482 aaPredicted RBP9.8□□□□□ -0.84
GINS3-204ENST00000561952 KCTD2Q14681 263 aa9.8□□□□□ -0.84
GINS3-204ENST00000561952 RRP12Q5JTH9 1297 aaKnown RBP9.8□□□□□ -0.84
GINS3-204ENST00000561952 SLFN13Q68D06 897 aa9.8□□□□□ -0.84
GINS3-204ENST00000561952 RIOX2Q8IUF8 465 aa9.8□□□□□ -0.84
GINS3-204ENST00000561952 REPS2Q8NFH8 660 aa9.8□□□□□ -0.84
GINS3-204ENST00000561952 MAML3Q96JK9 1138 aa9.8□□□□□ -0.84
GINS3-204ENST00000561952 RAVER2Q9HCJ3 691 aaKnown RBP9.8□□□□□ -0.84
GINS3-204ENST00000561952 HOMER2Q9NSB8 354 aa9.8□□□□□ -0.84
GINS3-204ENST00000561952 SLC5A4Q9NY91 659 aa9.8□□□□□ -0.84
GINS3-204ENST00000561952 MTMR4Q9NYA4 1195 aa9.8□□□□□ -0.84
GINS3-204ENST00000561952 ZNF214Q9UL59 606 aaPredicted RBP9.8□□□□□ -0.84
GINS3-204ENST00000561952 STX8Q9UNK0 236 aa9.8□□□□□ -0.84
GINS3-204ENST00000561952 RIPK3Q9Y572 518 aa9.8□□□□□ -0.84
GINS3-204ENST00000561952 PLIN4Q96Q06 1357 aa9.79□□□□□ -0.84
GINS3-204ENST00000561952 RANBP6O60518 1105 aaKnown RBP9.79□□□□□ -0.84
GINS3-204ENST00000561952 HAND2P61296 217 aa9.79□□□□□ -0.84
GINS3-204ENST00000561952 IRX6P78412 446 aaPredicted RBP9.79□□□□□ -0.84
GINS3-204ENST00000561952 NMIQ13287 307 aaPredicted RBP9.79□□□□□ -0.84
GINS3-204ENST00000561952 OLFML2BQ68BL8 750 aa9.79□□□□□ -0.84
GINS3-204ENST00000561952 LENG1Q96BZ8 264 aaPredicted RBP9.79□□□□□ -0.84
GINS3-204ENST00000561952 ADAMTS5Q9UNA0 930 aa9.79□□□□□ -0.84
GINS3-204ENST00000561952 TACC3Q9Y6A5 838 aa9.79□□□□□ -0.84
GINS3-204ENST00000561952 TMEM232C9JQI7 657 aa9.78□□□□□ -0.84
GINS3-204ENST00000561952 KBTBD13C9JR72 458 aa9.78□□□□□ -0.84
GINS3-204ENST00000561952 SEPT4O43236 478 aa9.78□□□□□ -0.84
GINS3-204ENST00000561952 MSCO60682 206 aa9.78□□□□□ -0.84
GINS3-204ENST00000561952 ZBED4O75132 1171 aa9.78□□□□□ -0.84
GINS3-204ENST00000561952 IGHDP01880 384 aa9.78□□□□□ -0.84
GINS3-204ENST00000561952 COL6A1P12109 1028 aa9.78□□□□□ -0.84
GINS3-204ENST00000561952 BMP3P12645 472 aa9.78□□□□□ -0.84
GINS3-204ENST00000561952 TAL1P17542 331 aaPredicted RBP9.78□□□□□ -0.84
GINS3-204ENST00000561952 MCCP23508 829 aa9.78□□□□□ -0.84
GINS3-204ENST00000561952 MAGEA10P43363 369 aaPredicted RBP9.78□□□□□ -0.84
GINS3-204ENST00000561952 SNAP25P60880 206 aa9.78□□□□□ -0.84
GINS3-204ENST00000561952 MDM2Q00987 491 aaPredicted RBP9.78□□□□□ -0.84
GINS3-204ENST00000561952 CCDC96Q2M329 555 aa9.78□□□□□ -0.84
GINS3-204ENST00000561952 KCTD1Q719H9 257 aa9.78□□□□□ -0.84
GINS3-204ENST00000561952 ZNF589Q86UQ0 364 aaPredicted RBP9.78□□□□□ -0.84
GINS3-204ENST00000561952 ABRAQ8N0Z2 381 aa9.78□□□□□ -0.84
GINS3-204ENST00000561952 PRPF38AQ8NAV1 312 aaKnown RBP9.78□□□□□ -0.84
GINS3-204ENST00000561952 NEDD1Q8NHV4 660 aa9.78□□□□□ -0.84
GINS3-204ENST00000561952 FERMT2Q96AC1 680 aa9.78□□□□□ -0.84
GINS3-204ENST00000561952 DDX11Q96FC9 970 aa9.78□□□□□ -0.84
GINS3-204ENST00000561952 TMEM121BQ9BXQ6 578 aaPredicted RBP9.78□□□□□ -0.84
GINS3-204ENST00000561952 TEX13BQ9BXU2 312 aa9.78□□□□□ -0.84
GINS3-204ENST00000561952 RWDD1Q9H446 243 aaPredicted RBP9.78□□□□□ -0.84
GINS3-204ENST00000561952 ATP11BQ9Y2G3 1177 aa9.78□□□□□ -0.84
GINS3-204ENST00000561952 DNM1LO00429 736 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms