RNA–Protein interactions for RNA: ENST00000561514.1

PALB2-202, Transcript of partner and localizer of BRCA2, humanhuman

TSL 5

Gene PALB2, Length 815 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-202ENST00000561514 TRIM43Q96BQ3 446 aaPredicted RBP10.07□□□□□ -0.8
PALB2-202ENST00000561514 MMP19Q99542 508 aa10.07□□□□□ -0.8
PALB2-202ENST00000561514 SLF1Q9BQI6 1058 aa10.07□□□□□ -0.8
PALB2-202ENST00000561514 TSEN34Q9BSV6 310 aaKnown RBP10.07□□□□□ -0.8
PALB2-202ENST00000561514 TEX13BQ9BXU2 312 aa10.07□□□□□ -0.8
PALB2-202ENST00000561514 EPB41L4AQ9HCS5 686 aaPredicted RBP10.07□□□□□ -0.8
PALB2-202ENST00000561514 XPNPEP3Q9NQH7 507 aa10.07□□□□□ -0.8
PALB2-202ENST00000561514 ECHDC1Q9NTX5 307 aa10.07□□□□□ -0.8
PALB2-202ENST00000561514 PRKAG2Q9UGJ0 569 aa10.07□□□□□ -0.8
PALB2-202ENST00000561514 CDH23Q9H251 3354 aa10.06□□□□□ -0.8
PALB2-202ENST00000561514 PARP14Q460N5 1801 aa10.06□□□□□ -0.8
PALB2-202ENST00000561514 VCANP13611 3396 aa10.06□□□□□ -0.8
PALB2-202ENST00000561514 TMEM265A0A087WTH1 108 aa10.06□□□□□ -0.8
PALB2-202ENST00000561514 SPDYE4A6NLX3 237 aa10.06□□□□□ -0.8
PALB2-202ENST00000561514 NDUFB10O96000 172 aa10.06□□□□□ -0.8
PALB2-202ENST00000561514 PGK2P07205 417 aa10.06□□□□□ -0.8
PALB2-202ENST00000561514 AKR1A1P14550 325 aa10.06□□□□□ -0.8
PALB2-202ENST00000561514 TAL1P17542 331 aaPredicted RBP10.06□□□□□ -0.8
PALB2-202ENST00000561514 CST5P28325 142 aaPredicted RBP10.06□□□□□ -0.8
PALB2-202ENST00000561514 TLE2Q04725 743 aa10.06□□□□□ -0.8
PALB2-202ENST00000561514 SHHQ15465 462 aa10.06□□□□□ -0.8
PALB2-202ENST00000561514 C9orf50Q5SZB4 431 aa10.06□□□□□ -0.8
PALB2-202ENST00000561514 ANO1Q5XXA6 986 aa10.06□□□□□ -0.8
PALB2-202ENST00000561514 ANKRD33Q7Z3H0 272 aa10.06□□□□□ -0.8
PALB2-202ENST00000561514 SH3RF1Q7Z6J0 888 aa10.06□□□□□ -0.8
PALB2-202ENST00000561514 RNF180Q86T96 592 aa10.06□□□□□ -0.8
PALB2-202ENST00000561514 KLHDC9Q8NEP7 349 aa10.06□□□□□ -0.8
PALB2-202ENST00000561514 APPBP2Q92624 585 aa10.06□□□□□ -0.8
PALB2-202ENST00000561514 BADQ92934 168 aa10.06□□□□□ -0.8
PALB2-202ENST00000561514 TOX2Q96NM4 488 aa10.06□□□□□ -0.8
PALB2-202ENST00000561514 RCAN3Q9UKA8 241 aa10.06□□□□□ -0.8
PALB2-202ENST00000561514 A0A1W2PQ45 241 aaPredicted RBP10.05□□□□□ -0.8
PALB2-202ENST00000561514 A0A1W2PQY0 241 aa10.05□□□□□ -0.8
PALB2-202ENST00000561514 F5H6K3 240 aa10.05□□□□□ -0.8
PALB2-202ENST00000561514 SNAI1O95863 264 aaPredicted RBP10.05□□□□□ -0.8
PALB2-202ENST00000561514 ZFYP08048 801 aaPredicted RBP10.05□□□□□ -0.8
PALB2-202ENST00000561514 ITGB8P26012 769 aa10.05□□□□□ -0.8
PALB2-202ENST00000561514 OAZ1P54368 228 aa10.05□□□□□ -0.8
PALB2-202ENST00000561514 NKX3-2P78367 333 aa10.05□□□□□ -0.8
PALB2-202ENST00000561514 KLRC3Q07444 240 aa10.05□□□□□ -0.8
PALB2-202ENST00000561514 PRPF38AQ8NAV1 312 aaKnown RBP10.05□□□□□ -0.8
PALB2-202ENST00000561514 GMCL1P1Q8NEA9 526 aa10.05□□□□□ -0.8
PALB2-202ENST00000561514 FGD4Q96M96 766 aa10.05□□□□□ -0.8
PALB2-202ENST00000561514 YTHDC1Q96MU7 727 aaKnown RBP10.05□□□□□ -0.8
PALB2-202ENST00000561514 DCTPP1Q9H773 170 aa10.05□□□□□ -0.8
PALB2-202ENST00000561514 SLC38A10Q9HBR0 1119 aa10.05□□□□□ -0.8
PALB2-202ENST00000561514 TACC3Q9Y6A5 838 aa10.05□□□□□ -0.8
PALB2-202ENST00000561514 MOXD2PA6NHM9 499 aa10.04□□□□□ -0.8
PALB2-202ENST00000561514 RNF113AO15541 343 aaKnown RBP10.04□□□□□ -0.8
PALB2-202ENST00000561514 GPAA1O43292 621 aa10.04□□□□□ -0.8
PALB2-202ENST00000561514 SMARCA5O60264 1052 aaPredicted RBP10.04□□□□□ -0.8
PALB2-202ENST00000561514 PGK1P00558 417 aa10.04□□□□□ -0.8
PALB2-202ENST00000561514 CLTBP09497 229 aa10.04□□□□□ -0.8
PALB2-202ENST00000561514 GNAT2P19087 354 aa10.04□□□□□ -0.8
PALB2-202ENST00000561514 C20orf194Q5TEA3 1177 aa10.04□□□□□ -0.8
PALB2-202ENST00000561514 ZNF697Q5TEC3 545 aa10.04□□□□□ -0.8
PALB2-202ENST00000561514 SNRNP48Q6IEG0 339 aaKnown RBP10.04□□□□□ -0.8
PALB2-202ENST00000561514 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.04□□□□□ -0.8
PALB2-202ENST00000561514 FERMT2Q96AC1 680 aa10.04□□□□□ -0.8
PALB2-202ENST00000561514 NUP88Q99567 741 aaPredicted RBP10.04□□□□□ -0.8
PALB2-202ENST00000561514 KATNBL1Q9H079 304 aa10.04□□□□□ -0.8
PALB2-202ENST00000561514 UPF3AQ9H1J1 476 aaKnown RBP10.04□□□□□ -0.8
PALB2-202ENST00000561514 TTYH1Q9H313 450 aaPredicted RBP10.04□□□□□ -0.8
PALB2-202ENST00000561514 MTMR4Q9NYA4 1195 aa10.04□□□□□ -0.8
PALB2-202ENST00000561514 TBX21Q9UL17 535 aa10.04□□□□□ -0.8
PALB2-202ENST00000561514 CNPY2Q9Y2B0 182 aa10.04□□□□□ -0.8
PALB2-202ENST00000561514 RBM19Q9Y4C8 960 aaKnown RBP10.04□□□□□ -0.8
PALB2-202ENST00000561514 RIPK3Q9Y572 518 aa10.04□□□□□ -0.8
PALB2-202ENST00000561514 ELP1O95163 1332 aa10.04□□□□□ -0.8
PALB2-202ENST00000561514 SYNRGQ9UMZ2 1314 aa10.04□□□□□ -0.8
PALB2-202ENST00000561514 DUSP11O75319 330 aaKnown RBP10.03□□□□□ -0.8
PALB2-202ENST00000561514 FDX1P10109 184 aa10.03□□□□□ -0.8
PALB2-202ENST00000561514 ACLYP53396 1101 aa10.03□□□□□ -0.8
PALB2-202ENST00000561514 EPHB4P54760 987 aa10.03□□□□□ -0.8
PALB2-202ENST00000561514 CHST13Q8NET6 341 aa10.03□□□□□ -0.8
PALB2-202ENST00000561514 LENG1Q96BZ8 264 aaPredicted RBP10.03□□□□□ -0.8
PALB2-202ENST00000561514 CEP95Q96GE4 821 aa10.03□□□□□ -0.8
PALB2-202ENST00000561514 CDX2Q99626 313 aaPredicted RBP10.03□□□□□ -0.8
PALB2-202ENST00000561514 SEMA6BQ9H3T3 888 aa10.03□□□□□ -0.8
PALB2-202ENST00000561514 PRDM5Q9NQX1 630 aaPredicted RBP10.03□□□□□ -0.8
PALB2-202ENST00000561514 FBXO40Q9UH90 709 aa10.03□□□□□ -0.8
PALB2-202ENST00000561514 FEM1BQ9UK73 627 aa10.03□□□□□ -0.8
PALB2-202ENST00000561514 FAM184BQ9ULE4 1060 aa10.03□□□□□ -0.8
PALB2-202ENST00000561514 M0R2C6 588 aa10.02□□□□□ -0.81
PALB2-202ENST00000561514 CTAGE5O15320 804 aa10.02□□□□□ -0.81
PALB2-202ENST00000561514 ADCY6O43306 1168 aa10.02□□□□□ -0.81
PALB2-202ENST00000561514 PLA2G6O60733 806 aa10.02□□□□□ -0.81
PALB2-202ENST00000561514 TTLL1O95922 423 aa10.02□□□□□ -0.81
PALB2-202ENST00000561514 NOVP48745 357 aa10.02□□□□□ -0.81
PALB2-202ENST00000561514 CDK7P50613 346 aa10.02□□□□□ -0.81
PALB2-202ENST00000561514 GJA9P57773 515 aa10.02□□□□□ -0.81
PALB2-202ENST00000561514 FAAP100Q0VG06 881 aa10.02□□□□□ -0.81
PALB2-202ENST00000561514 RASIP1Q5U651 963 aa10.02□□□□□ -0.81
PALB2-202ENST00000561514 NEDD1Q8NHV4 660 aa10.02□□□□□ -0.81
PALB2-202ENST00000561514 PI4K2BQ8TCG2 481 aa10.02□□□□□ -0.81
PALB2-202ENST00000561514 GPATCH3Q96I76 525 aa10.02□□□□□ -0.81
PALB2-202ENST00000561514 COL25A1Q9BXS0 654 aaPredicted RBP10.02□□□□□ -0.81
PALB2-202ENST00000561514 ABHD16BQ9H3Z7 469 aa10.02□□□□□ -0.81
PALB2-202ENST00000561514 MKNK2Q9HBH9 465 aa10.02□□□□□ -0.81
PALB2-202ENST00000561514 ZNF287Q9HBT7 754 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms