RNA–Protein interactions for RNA: ENST00000561425.5

TPM1-232, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-232ENST00000561425 MNX1P50219 401 aaPredicted RBP24.42■■□□□ 1.5
TPM1-232ENST00000561425 SAMD1Q6SPF0 538 aaPredicted RBP24.42■■□□□ 1.5
TPM1-232ENST00000561425 DPP9Q86TI2 863 aa24.42■■□□□ 1.5
TPM1-232ENST00000561425 ANKLE1Q8NAG6 615 aa24.42■■□□□ 1.5
TPM1-232ENST00000561425 TTC14Q96N46 770 aa24.42■■□□□ 1.5
TPM1-232ENST00000561425 TEX13BQ9BXU2 312 aa24.42■■□□□ 1.5
TPM1-232ENST00000561425 RNF41Q9H4P4 317 aaPredicted RBP24.42■■□□□ 1.5
TPM1-232ENST00000561425 OGDHLQ9ULD0 1010 aa24.42■■□□□ 1.5
TPM1-232ENST00000561425 OAZ1P54368 228 aa24.41■■□□□ 1.5
TPM1-232ENST00000561425 MFSD14CQ5VZR4 134 aa24.41■■□□□ 1.5
TPM1-232ENST00000561425 LHX8Q68G74 356 aa24.41■■□□□ 1.5
TPM1-232ENST00000561425 RCSD1Q6JBY9 416 aa24.41■■□□□ 1.5
TPM1-232ENST00000561425 RIPK3Q9Y572 518 aa24.41■■□□□ 1.5
TPM1-232ENST00000561425 RAD50Q92878 1312 aa24.4■■□□□ 1.5
TPM1-232ENST00000561425 ZBED4O75132 1171 aa24.4■■□□□ 1.5
TPM1-232ENST00000561425 FARP2O94887 1054 aaPredicted RBP24.4■■□□□ 1.5
TPM1-232ENST00000561425 MCCP23508 829 aa24.4■■□□□ 1.5
TPM1-232ENST00000561425 CCND3P30281 292 aaPredicted RBP24.4■■□□□ 1.5
TPM1-232ENST00000561425 SLC1A4P43007 532 aa24.4■■□□□ 1.5
TPM1-232ENST00000561425 FAM160B2Q86V87 743 aa24.4■■□□□ 1.5
TPM1-232ENST00000561425 CHURC1Q8WUH1 139 aa24.4■■□□□ 1.5
TPM1-232ENST00000561425 KIFC2Q96AC6 838 aa24.4■■□□□ 1.5
TPM1-232ENST00000561425 TMEM47Q9BQJ4 181 aa24.4■■□□□ 1.5
TPM1-232ENST00000561425 CTNNA3Q9UI47 895 aa24.4■■□□□ 1.5
TPM1-232ENST00000561425 DIS3Q9Y2L1 958 aaKnown RBP24.4■■□□□ 1.5
TPM1-232ENST00000561425 TMEM232C9JQI7 657 aa24.39■■□□□ 1.49
TPM1-232ENST00000561425 TOP1P11387 765 aaKnown RBP24.39■■□□□ 1.49
TPM1-232ENST00000561425 RRP12Q5JTH9 1297 aaKnown RBP24.39■■□□□ 1.49
TPM1-232ENST00000561425 TOMM22Q9NS69 142 aa24.39■■□□□ 1.49
TPM1-232ENST00000561425 SLC5A4Q9NY91 659 aa24.39■■□□□ 1.49
TPM1-232ENST00000561425 NEDD4P46934 1319 aa24.38■■□□□ 1.49
TPM1-232ENST00000561425 COL11A1P12107 1806 aaPredicted RBP24.38■■□□□ 1.49
TPM1-232ENST00000561425 STAT2P52630 851 aa24.38■■□□□ 1.49
TPM1-232ENST00000561425 ZNF792Q3KQV3 632 aa24.38■■□□□ 1.49
TPM1-232ENST00000561425 MAML3Q96JK9 1138 aa24.38■■□□□ 1.49
TPM1-232ENST00000561425 MMP19Q99542 508 aa24.38■■□□□ 1.49
TPM1-232ENST00000561425 CYBAP13498 195 aa24.37■■□□□ 1.49
TPM1-232ENST00000561425 CYP2C19P33261 490 aa24.37■■□□□ 1.49
TPM1-232ENST00000561425 SNRNP48Q6IEG0 339 aaKnown RBP24.37■■□□□ 1.49
TPM1-232ENST00000561425 BTNL9Q6UXG8 535 aa24.37■■□□□ 1.49
TPM1-232ENST00000561425 TRPV1Q8NER1 839 aa24.37■■□□□ 1.49
TPM1-232ENST00000561425 DCAF4Q8WV16 495 aa24.37■■□□□ 1.49
TPM1-232ENST00000561425 RUFY2Q8WXA3 655 aa24.37■■□□□ 1.49
TPM1-232ENST00000561425 ANKS1AQ92625 1134 aa24.37■■□□□ 1.49
TPM1-232ENST00000561425 ESR2Q92731 530 aa24.37■■□□□ 1.49
TPM1-232ENST00000561425 ZNF536O15090 1300 aa24.36■■□□□ 1.49
TPM1-232ENST00000561425 DNAJC25-GNG10A0A024R161 153 aa24.36■■□□□ 1.49
TPM1-232ENST00000561425 KCTD2Q14681 263 aa24.36■■□□□ 1.49
TPM1-232ENST00000561425 IMMTQ16891 758 aaKnown RBP24.36■■□□□ 1.49
TPM1-232ENST00000561425 CENPQQ7L2Z9 268 aaPredicted RBP24.36■■□□□ 1.49
TPM1-232ENST00000561425 DGKHQ86XP1 1220 aa24.36■■□□□ 1.49
TPM1-232ENST00000561425 RAVER2Q9HCJ3 691 aaKnown RBP24.36■■□□□ 1.49
TPM1-232ENST00000561425 SGSM2O43147 1006 aa24.35■■□□□ 1.49
TPM1-232ENST00000561425 SNHG28P0DPA3 235 aa24.35■■□□□ 1.49
TPM1-232ENST00000561425 KCTD1Q719H9 257 aa24.35■■□□□ 1.49
TPM1-232ENST00000561425 RASGRP2Q7LDG7 609 aa24.35■■□□□ 1.49
TPM1-232ENST00000561425 CPXCR1Q8N123 301 aa24.35■■□□□ 1.49
TPM1-232ENST00000561425 CHST13Q8NET6 341 aa24.35■■□□□ 1.49
TPM1-232ENST00000561425 PGK2P07205 417 aa24.34■■□□□ 1.49
TPM1-232ENST00000561425 PAWRQ96IZ0 340 aaKnown RBP24.34■■□□□ 1.49
TPM1-232ENST00000561425 HTATIP2Q9BUP3 242 aa24.34■■□□□ 1.49
TPM1-232ENST00000561425 ZSWIM5Q9P217 1185 aa24.34■■□□□ 1.49
TPM1-232ENST00000561425 NRBP1Q9UHY1 535 aa24.34■■□□□ 1.49
TPM1-232ENST00000561425 PRR12Q9ULL5 1215 aa24.34■■□□□ 1.49
TPM1-232ENST00000561425 MSCO60682 206 aa24.33■■□□□ 1.49
TPM1-232ENST00000561425 PTH1RQ03431 593 aa24.33■■□□□ 1.49
TPM1-232ENST00000561425 CCDC178Q5BJE1 867 aa24.33■■□□□ 1.49
TPM1-232ENST00000561425 NECAB2Q7Z6G3 386 aa24.33■■□□□ 1.49
TPM1-232ENST00000561425 DIS3LQ8TF46 1054 aaKnown RBP24.33■■□□□ 1.49
TPM1-232ENST00000561425 FBXO40Q9UH90 709 aa24.33■■□□□ 1.49
TPM1-232ENST00000561425 DDX20Q9UHI6 824 aaKnown RBP24.33■■□□□ 1.49
TPM1-232ENST00000561425 KDM4AO75164 1064 aa24.32■■□□□ 1.48
TPM1-232ENST00000561425 PDHBP11177 359 aa24.32■■□□□ 1.48
TPM1-232ENST00000561425 COL6A1P12109 1028 aa24.32■■□□□ 1.48
TPM1-232ENST00000561425 MSL3Q8N5Y2 521 aaKnown RBP24.32■■□□□ 1.48
TPM1-232ENST00000561425 CTDP1Q9Y5B0 961 aaPredicted RBP24.32■■□□□ 1.48
TPM1-232ENST00000561425 LAMA4Q16363 1823 aa24.32■■□□□ 1.48
TPM1-232ENST00000561425 B4E1Z4 1266 aa24.31■■□□□ 1.48
TPM1-232ENST00000561425 TKFCQ3LXA3 575 aa24.31■■□□□ 1.48
TPM1-232ENST00000561425 TTBK2Q6IQ55 1244 aa24.31■■□□□ 1.48
TPM1-232ENST00000561425 MAMDC4Q6UXC1 1216 aa24.31■■□□□ 1.48
TPM1-232ENST00000561425 ZNF467Q7Z7K2 595 aaPredicted RBP24.31■■□□□ 1.48
TPM1-232ENST00000561425 TINF2Q9BSI4 451 aa24.31■■□□□ 1.48
TPM1-232ENST00000561425 KRT23Q9C075 422 aa24.31■■□□□ 1.48
TPM1-232ENST00000561425 CNNM2Q9H8M5 875 aa24.31■■□□□ 1.48
TPM1-232ENST00000561425 ZNFX1Q9P2E3 1918 aaKnown RBP24.3■■□□□ 1.48
TPM1-232ENST00000561425 ZNF543Q08ER8 600 aa24.3■■□□□ 1.48
TPM1-232ENST00000561425 IQCA1Q86XH1 822 aa24.3■■□□□ 1.48
TPM1-232ENST00000561425 MAP4K1Q92918 833 aa24.3■■□□□ 1.48
TPM1-232ENST00000561425 AGBL1Q96MI9 1066 aa24.3■■□□□ 1.48
TPM1-232ENST00000561425 ZKSCAN3Q9BRR0 538 aa24.3■■□□□ 1.48
TPM1-232ENST00000561425 RANBP17Q9H2T7 1088 aaKnown RBP24.3■■□□□ 1.48
TPM1-232ENST00000561425 SEPT4O43236 478 aa24.29■■□□□ 1.48
TPM1-232ENST00000561425 CYP21A2P08686 494 aa24.29■■□□□ 1.48
TPM1-232ENST00000561425 PRAMEF19Q5SWL8 479 aa24.29■■□□□ 1.48
TPM1-232ENST00000561425 DPF3Q92784 378 aa24.29■■□□□ 1.48
TPM1-232ENST00000561425 CHMP4CQ96CF2 233 aa24.29■■□□□ 1.48
TPM1-232ENST00000561425 FGD4Q96M96 766 aa24.29■■□□□ 1.48
TPM1-232ENST00000561425 ZSCAN10Q96SZ4 725 aaPredicted RBP24.29■■□□□ 1.48
TPM1-232ENST00000561425 IKQ13123 557 aaPredicted RBP24.28■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms