RNA–Protein interactions for RNA: ENST00000561206.1

USP8-216, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 2

Gene USP8, Length 556 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-216ENST00000561206 RPTNQ6XPR3 784 aa6.65□□□□□ -1.34
USP8-216ENST00000561206 ZNF655Q8N720 491 aaPredicted RBP6.65□□□□□ -1.34
USP8-216ENST00000561206 C12orf49Q9H741 205 aa6.65□□□□□ -1.34
USP8-216ENST00000561206 DCTN4Q9UJW0 460 aa6.65□□□□□ -1.34
USP8-216ENST00000561206 TCFL5Q9UL49 500 aa6.65□□□□□ -1.34
USP8-216ENST00000561206 UPK3BL1B0FP48 263 aa6.64□□□□□ -1.35
USP8-216ENST00000561206 UPK3BL2E5RIL1 263 aa6.64□□□□□ -1.35
USP8-216ENST00000561206 MAPKAPK2P49137 400 aa6.64□□□□□ -1.35
USP8-216ENST00000561206 PCBP3P57721 371 aaKnown RBP6.64□□□□□ -1.35
USP8-216ENST00000561206 DLX2Q07687 328 aaPredicted RBP6.64□□□□□ -1.35
USP8-216ENST00000561206 TARBP2Q15633 366 aaKnown RBP6.64□□□□□ -1.35
USP8-216ENST00000561206 TSNAXIP1Q2TAA8 658 aa6.64□□□□□ -1.35
USP8-216ENST00000561206 BBS9Q3SYG4 887 aa6.64□□□□□ -1.35
USP8-216ENST00000561206 PLEKHN1Q494U1 663 aaPredicted RBP6.64□□□□□ -1.35
USP8-216ENST00000561206 CRIP3Q6Q6R5 217 aa6.64□□□□□ -1.35
USP8-216ENST00000561206 FAM13CQ8NE31 585 aa6.64□□□□□ -1.35
USP8-216ENST00000561206 TCTN2Q96GX1 697 aa6.64□□□□□ -1.35
USP8-216ENST00000561206 FCRL2Q96LA5 508 aaPredicted RBP6.64□□□□□ -1.35
USP8-216ENST00000561206 WDR26Q9H7D7 661 aa6.64□□□□□ -1.35
USP8-216ENST00000561206 SUSD2Q9UGT4 822 aa6.64□□□□□ -1.35
USP8-216ENST00000561206 ACSL6Q9UKU0 697 aa6.64□□□□□ -1.35
USP8-216ENST00000561206 A0A1B0GTL3 188 aa6.63□□□□□ -1.35
USP8-216ENST00000561206 USP17L7P0C7H9 530 aa6.63□□□□□ -1.35
USP8-216ENST00000561206 KIR3DS1Q14943 382 aa6.63□□□□□ -1.35
USP8-216ENST00000561206 CRB2Q5IJ48 1285 aa6.63□□□□□ -1.35
USP8-216ENST00000561206 SLCO6A1Q86UG4 719 aa6.63□□□□□ -1.35
USP8-216ENST00000561206 ADGRG2Q8IZP9 1017 aa6.63□□□□□ -1.35
USP8-216ENST00000561206 ARID3AQ99856 593 aa6.63□□□□□ -1.35
USP8-216ENST00000561206 GNEQ9Y223 722 aaKnown RBP6.63□□□□□ -1.35
USP8-216ENST00000561206 TAF6LQ9Y6J9 622 aa6.63□□□□□ -1.35
USP8-216ENST00000561206 NUDT19A8MXV4 375 aa6.62□□□□□ -1.35
USP8-216ENST00000561206 NR1I3Q14994 352 aa6.62□□□□□ -1.35
USP8-216ENST00000561206 LSRQ86X29 649 aaPredicted RBP6.62□□□□□ -1.35
USP8-216ENST00000561206 C8orf49Q96NF6 230 aa6.62□□□□□ -1.35
USP8-216ENST00000561206 ASCC2Q9H1I8 757 aaPredicted RBP6.62□□□□□ -1.35
USP8-216ENST00000561206 BIN2Q9UBW5 565 aaPredicted RBP6.62□□□□□ -1.35
USP8-216ENST00000561206 CEBPAP49715 358 aaPredicted RBP6.61□□□□□ -1.35
USP8-216ENST00000561206 ZC3H14Q6PJT7 736 aaKnown RBP6.61□□□□□ -1.35
USP8-216ENST00000561206 MIR1-1HGQ9H1L0 117 aa6.61□□□□□ -1.35
USP8-216ENST00000561206 A0A1W2PQ45 241 aaPredicted RBP6.6□□□□□ -1.35
USP8-216ENST00000561206 A0A1W2PQY0 241 aa6.6□□□□□ -1.35
USP8-216ENST00000561206 ALG1LQ6GMV1 187 aa6.6□□□□□ -1.35
USP8-216ENST00000561206 ZPBP2Q6X784 338 aa6.6□□□□□ -1.35
USP8-216ENST00000561206 ZNF526Q8TF50 670 aaPredicted RBP6.6□□□□□ -1.35
USP8-216ENST00000561206 DVL3Q92997 716 aaPredicted RBP6.6□□□□□ -1.35
USP8-216ENST00000561206 TTF2Q9UNY4 1162 aaKnown RBP6.6□□□□□ -1.35
USP8-216ENST00000561206 CORINQ9Y5Q5 1042 aa6.6□□□□□ -1.35
USP8-216ENST00000561206 PMF1-BGLAPU3KQ54 211 aa6.6□□□□□ -1.35
USP8-216ENST00000561206 PRR36Q9H6K5 1346 aa6.59□□□□□ -1.35
USP8-216ENST00000561206 PRKCAP17252 672 aa6.59□□□□□ -1.35
USP8-216ENST00000561206 PLCG1P19174 1290 aa6.59□□□□□ -1.35
USP8-216ENST00000561206 LMNB1P20700 586 aa6.59□□□□□ -1.35
USP8-216ENST00000561206 MAPK1P28482 360 aa6.59□□□□□ -1.35
USP8-216ENST00000561206 TNNI2P48788 182 aa6.59□□□□□ -1.35
USP8-216ENST00000561206 FOXO4P98177 505 aa6.59□□□□□ -1.35
USP8-216ENST00000561206 ZNF200P98182 395 aaPredicted RBP6.59□□□□□ -1.35
USP8-216ENST00000561206 CYP4F8P98187 520 aa6.59□□□□□ -1.35
USP8-216ENST00000561206 ZFPM1Q8IX07 1006 aa6.59□□□□□ -1.35
USP8-216ENST00000561206 CARFQ8N187 725 aa6.59□□□□□ -1.35
USP8-216ENST00000561206 DDX1Q92499 740 aaKnown RBP6.59□□□□□ -1.35
USP8-216ENST00000561206 CCDC74BQ96LY2 380 aa6.59□□□□□ -1.35
USP8-216ENST00000561206 PRDM14Q9GZV8 571 aa6.59□□□□□ -1.35
USP8-216ENST00000561206 PCED1AQ9H1Q7 454 aa6.59□□□□□ -1.35
USP8-216ENST00000561206 SPG7Q9UQ90 795 aa6.59□□□□□ -1.35
USP8-216ENST00000561206 GPR55Q9Y2T6 319 aaPredicted RBP6.59□□□□□ -1.35
USP8-216ENST00000561206 ENDOUP21128 410 aaKnown RBP6.58□□□□□ -1.36
USP8-216ENST00000561206 GJA9P57773 515 aa6.58□□□□□ -1.36
USP8-216ENST00000561206 FMR1Q06787 632 aaKnown RBP eCLIP6.58□□□□□ -1.36
USP8-216ENST00000561206 EAF1Q96JC9 268 aaPredicted RBP6.58□□□□□ -1.36
USP8-216ENST00000561206 SSBP3Q9BWW4 388 aaPredicted RBP6.58□□□□□ -1.36
USP8-216ENST00000561206 RNF38Q9H0F5 515 aa6.58□□□□□ -1.36
USP8-216ENST00000561206 FZD7O75084 574 aa6.57□□□□□ -1.36
USP8-216ENST00000561206 BRD1O95696 1058 aa6.57□□□□□ -1.36
USP8-216ENST00000561206 PLATP00750 562 aa6.57□□□□□ -1.36
USP8-216ENST00000561206 LIG3P49916 1009 aa6.57□□□□□ -1.36
USP8-216ENST00000561206 LOXL4Q96JB6 756 aa6.57□□□□□ -1.36
USP8-216ENST00000561206 SSU72P8A0A1W2PR75 194 aa6.56□□□□□ -1.36
USP8-216ENST00000561206 SYPP08247 313 aa6.56□□□□□ -1.36
USP8-216ENST00000561206 ATF2P15336 505 aa6.56□□□□□ -1.36
USP8-216ENST00000561206 TFE3P19532 575 aaPredicted RBP6.56□□□□□ -1.36
USP8-216ENST00000561206 SETDB2Q96T68 719 aa6.56□□□□□ -1.36
USP8-216ENST00000561206 ERVK13-1Q9NX77 482 aa6.56□□□□□ -1.36
USP8-216ENST00000561206 TSC22D4Q9Y3Q8 395 aa6.56□□□□□ -1.36
USP8-216ENST00000561206 SRGAP3O43295 1099 aa6.55□□□□□ -1.36
USP8-216ENST00000561206 FKTNO75072 461 aa6.55□□□□□ -1.36
USP8-216ENST00000561206 CDSNQ15517 529 aa6.55□□□□□ -1.36
USP8-216ENST00000561206 CCDC85BQ15834 202 aaPredicted RBP6.55□□□□□ -1.36
USP8-216ENST00000561206 TBC1D10BQ4KMP7 808 aaPredicted RBP6.55□□□□□ -1.36
USP8-216ENST00000561206 SPRED1Q7Z699 444 aa6.55□□□□□ -1.36
USP8-216ENST00000561206 CCDC84Q86UT8 332 aaPredicted RBP6.55□□□□□ -1.36
USP8-216ENST00000561206 NUP43Q8NFH3 380 aa6.55□□□□□ -1.36
USP8-216ENST00000561206 MAPK8P45983 427 aa6.54□□□□□ -1.36
USP8-216ENST00000561206 RNF4P78317 190 aa6.54□□□□□ -1.36
USP8-216ENST00000561206 USP51Q70EK9 711 aa6.54□□□□□ -1.36
USP8-216ENST00000561206 NBPF9Q3BBW0 867 aa6.53□□□□□ -1.36
USP8-216ENST00000561206 TMC3Q7Z5M5 1100 aa6.53□□□□□ -1.36
USP8-216ENST00000561206 ZNF761Q86XN6 746 aaPredicted RBP6.53□□□□□ -1.36
USP8-216ENST00000561206 SH3RF3Q8TEJ3 882 aaPredicted RBP6.53□□□□□ -1.36
USP8-216ENST00000561206 FRMD6Q96NE9 622 aa6.53□□□□□ -1.36
USP8-216ENST00000561206 CHURC1-FNTBB4DL54 471 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms