RNA–Protein interactions for RNA: ENST00000561076.1

RTF1-207, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 314 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-207ENST00000561076 RNF144AP50876 292 aaPredicted RBP2.44□□□□□ -2.02
RTF1-207ENST00000561076 SESN3P58005 492 aa2.44□□□□□ -2.02
RTF1-207ENST00000561076 ZNF280AP59817 542 aaPredicted RBP2.44□□□□□ -2.02
RTF1-207ENST00000561076 GUCY1A3Q02108 690 aa2.44□□□□□ -2.02
RTF1-207ENST00000561076 FAAP100Q0VG06 881 aa2.44□□□□□ -2.02
RTF1-207ENST00000561076 KLF1Q13351 362 aaPredicted RBP2.44□□□□□ -2.02
RTF1-207ENST00000561076 IKBKEQ14164 716 aa2.44□□□□□ -2.02
RTF1-207ENST00000561076 PDE3AQ14432 1141 aa2.44□□□□□ -2.02
RTF1-207ENST00000561076 ZNF460Q14592 562 aa2.44□□□□□ -2.02
RTF1-207ENST00000561076 TOMM20Q15388 145 aa2.44□□□□□ -2.02
RTF1-207ENST00000561076 ELF2Q15723 593 aa2.44□□□□□ -2.02
RTF1-207ENST00000561076 ZYXQ15942 572 aaKnown RBP2.44□□□□□ -2.02
RTF1-207ENST00000561076 HP1BP3Q5SSJ5 553 aaPredicted RBP2.44□□□□□ -2.02
RTF1-207ENST00000561076 TMEM240Q5SV17 173 aa2.44□□□□□ -2.02
RTF1-207ENST00000561076 NOL9Q5SY16 702 aaKnown RBP2.44□□□□□ -2.02
RTF1-207ENST00000561076 YOD1Q5VVQ6 348 aaPredicted RBP2.44□□□□□ -2.02
RTF1-207ENST00000561076 PPP4R3AQ6IN85 833 aa2.44□□□□□ -2.02
RTF1-207ENST00000561076 FAM117BQ6P1L5 589 aa2.44□□□□□ -2.02
RTF1-207ENST00000561076 C4orf50Q6ZRC1 276 aa2.44□□□□□ -2.02
RTF1-207ENST00000561076 EP400NLQ6ZTU2 488 aa2.44□□□□□ -2.02
RTF1-207ENST00000561076 Q6ZVU0 165 aa2.44□□□□□ -2.02
RTF1-207ENST00000561076 USP53Q70EK8 1073 aa2.44□□□□□ -2.02
RTF1-207ENST00000561076 MAMDC2Q7Z304 686 aaPredicted RBP2.44□□□□□ -2.02
RTF1-207ENST00000561076 LYSMD3Q7Z3D4 306 aa2.44□□□□□ -2.02
RTF1-207ENST00000561076 SRGAP1Q7Z6B7 1085 aa2.44□□□□□ -2.02
RTF1-207ENST00000561076 ANKLE2Q86XL3 938 aa2.44□□□□□ -2.02
RTF1-207ENST00000561076 ANKRD18AQ8IVF6 992 aa2.44□□□□□ -2.02
RTF1-207ENST00000561076 ZC3H7AQ8IWR0 971 aaKnown RBP2.44□□□□□ -2.02
RTF1-207ENST00000561076 ZNF295-AS1Q8N0V1 137 aa2.44□□□□□ -2.02
RTF1-207ENST00000561076 MSL3Q8N5Y2 521 aaKnown RBP2.44□□□□□ -2.02
RTF1-207ENST00000561076 FAM13CQ8NE31 585 aa2.44□□□□□ -2.02
RTF1-207ENST00000561076 ENOX1Q8TC92 643 aaKnown RBP2.44□□□□□ -2.02
RTF1-207ENST00000561076 NUP133Q8WUM0 1156 aa2.44□□□□□ -2.02
RTF1-207ENST00000561076 RPGRQ92834 1020 aaKnown RBP2.44□□□□□ -2.02
RTF1-207ENST00000561076 BHMTQ93088 406 aa2.44□□□□□ -2.02
RTF1-207ENST00000561076 NXPE3Q969Y0 559 aa2.44□□□□□ -2.02
RTF1-207ENST00000561076 SLC39A13Q96H72 371 aa2.44□□□□□ -2.02
RTF1-207ENST00000561076 TBATAQ96M53 351 aa2.44□□□□□ -2.02
RTF1-207ENST00000561076 FGD4Q96M96 766 aa2.44□□□□□ -2.02
RTF1-207ENST00000561076 AIFM3Q96NN9 605 aa2.44□□□□□ -2.02
RTF1-207ENST00000561076 HHIPQ96QV1 700 aa2.44□□□□□ -2.02
RTF1-207ENST00000561076 INSM2Q96T92 566 aaPredicted RBP2.44□□□□□ -2.02
RTF1-207ENST00000561076 GAS2L1Q99501 681 aaPredicted RBP2.44□□□□□ -2.02
RTF1-207ENST00000561076 NUP88Q99567 741 aaPredicted RBP2.44□□□□□ -2.02
RTF1-207ENST00000561076 TSEN34Q9BSV6 310 aaKnown RBP2.44□□□□□ -2.02
RTF1-207ENST00000561076 SLC13A1Q9BZW2 595 aa2.44□□□□□ -2.02
RTF1-207ENST00000561076 ZC3H12CQ9C0D7 883 aaKnown RBP2.44□□□□□ -2.02
RTF1-207ENST00000561076 MKRN2Q9H000 416 aaKnown RBP2.44□□□□□ -2.02
RTF1-207ENST00000561076 SLC52A2Q9HAB3 445 aa2.44□□□□□ -2.02
RTF1-207ENST00000561076 GPAMQ9HCL2 828 aa2.44□□□□□ -2.02
RTF1-207ENST00000561076 SMC4Q9NTJ3 1288 aa2.44□□□□□ -2.02
RTF1-207ENST00000561076 SAMD15Q9P1V8 674 aa2.44□□□□□ -2.02
RTF1-207ENST00000561076 ZNF214Q9UL59 606 aaPredicted RBP2.44□□□□□ -2.02
RTF1-207ENST00000561076 ISY1Q9ULR0 285 aaKnown RBP2.44□□□□□ -2.02
RTF1-207ENST00000561076 AKT3Q9Y243 479 aa2.44□□□□□ -2.02
RTF1-207ENST00000561076 LTBP3Q9NS15 1303 aa2.43□□□□□ -2.02
RTF1-207ENST00000561076 ABHD14A-ACY1A0A1B0GW23 586 aa2.43□□□□□ -2.02
RTF1-207ENST00000561076 TTC24A2A3L6 582 aaPredicted RBP2.43□□□□□ -2.02
RTF1-207ENST00000561076 POTEMA6NI47 508 aa2.43□□□□□ -2.02
RTF1-207ENST00000561076 SLC22A31A6NKX4 558 aa2.43□□□□□ -2.02
RTF1-207ENST00000561076 GOLGA8AA7E2F4 631 aa2.43□□□□□ -2.02
RTF1-207ENST00000561076 GOLGA8BA8MQT2 603 aa2.43□□□□□ -2.02
RTF1-207ENST00000561076 SPATA31C2B4DYI2 1134 aa2.43□□□□□ -2.02
RTF1-207ENST00000561076 M0R2C6 588 aa2.43□□□□□ -2.02
RTF1-207ENST00000561076 TNFRSF10CO14798 259 aa2.43□□□□□ -2.02
RTF1-207ENST00000561076 GSTA4O15217 222 aa2.43□□□□□ -2.02
RTF1-207ENST00000561076 ATXN7O15265 892 aaPredicted RBP2.43□□□□□ -2.02
RTF1-207ENST00000561076 HRO43593 1189 aa2.43□□□□□ -2.02
RTF1-207ENST00000561076 DTNBO60941 627 aa2.43□□□□□ -2.02
RTF1-207ENST00000561076 MAP3K6O95382 1288 aa2.43□□□□□ -2.02
RTF1-207ENST00000561076 AGR2O95994 175 aa2.43□□□□□ -2.02
RTF1-207ENST00000561076 B3GALT4O96024 378 aa2.43□□□□□ -2.02
RTF1-207ENST00000561076 CYP11A1P05108 521 aa2.43□□□□□ -2.02
RTF1-207ENST00000561076 ITGAVP06756 1048 aa2.43□□□□□ -2.02
RTF1-207ENST00000561076 EPHX1P07099 455 aa2.43□□□□□ -2.02
RTF1-207ENST00000561076 SNRPB2P08579 225 aaKnown RBP2.43□□□□□ -2.02
RTF1-207ENST00000561076 GSTP1P09211 210 aaKnown RBP2.43□□□□□ -2.02
RTF1-207ENST00000561076 ITGA4P13612 1032 aa2.43□□□□□ -2.02
RTF1-207ENST00000561076 HSD3B1P14060 373 aa2.43□□□□□ -2.02
RTF1-207ENST00000561076 ACPPP15309 386 aa2.43□□□□□ -2.02
RTF1-207ENST00000561076 BPIP17213 487 aa2.43□□□□□ -2.02
RTF1-207ENST00000561076 TNFAIP3P21580 790 aa2.43□□□□□ -2.02
RTF1-207ENST00000561076 CHKAP35790 457 aa2.43□□□□□ -2.02
RTF1-207ENST00000561076 ID4P47928 161 aa2.43□□□□□ -2.02
RTF1-207ENST00000561076 LSSP48449 732 aa2.43□□□□□ -2.02
RTF1-207ENST00000561076 PMS1P54277 932 aaKnown RBP2.43□□□□□ -2.02
RTF1-207ENST00000561076 NRLP54845 237 aa2.43□□□□□ -2.02
RTF1-207ENST00000561076 ST5P78524 1137 aa2.43□□□□□ -2.02
RTF1-207ENST00000561076 GSTM4Q03013 218 aa2.43□□□□□ -2.02
RTF1-207ENST00000561076 KRT72Q14CN4 511 aa2.43□□□□□ -2.02
RTF1-207ENST00000561076 PCBP2Q15366 365 aaKnown RBP eCLIP2.43□□□□□ -2.02
RTF1-207ENST00000561076 DDB1Q16531 1140 aa2.43□□□□□ -2.02
RTF1-207ENST00000561076 KIAA0753Q2KHM9 967 aa2.43□□□□□ -2.02
RTF1-207ENST00000561076 CCDC96Q2M329 555 aa2.43□□□□□ -2.02
RTF1-207ENST00000561076 CCDC93Q567U6 631 aa2.43□□□□□ -2.02
RTF1-207ENST00000561076 CCDC157Q569K6 752 aa2.43□□□□□ -2.02
RTF1-207ENST00000561076 TRIM61Q5EBN2 209 aa2.43□□□□□ -2.02
RTF1-207ENST00000561076 FAM47CQ5HY64 1035 aa2.43□□□□□ -2.02
RTF1-207ENST00000561076 WDR44Q5JSH3 913 aa2.43□□□□□ -2.02
RTF1-207ENST00000561076 TJAP1Q5JTD0 557 aa2.43□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms