RNA–Protein interactions for RNA: ENST00000561004.1

AP4E1-204, Transcript of adaptor related protein complex 4 subunit epsilon 1, humanhuman

TSL 3

Gene AP4E1, Length 503 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1-204ENST00000561004 RALGAPBQ86X10 1494 aa6.6□□□□□ -1.35
AP4E1-204ENST00000561004 CCDC144AA2RUR9 1427 aa6.59□□□□□ -1.35
AP4E1-204ENST00000561004 NPATQ14207 1427 aa6.59□□□□□ -1.35
AP4E1-204ENST00000561004 KANK1Q14678 1352 aa6.59□□□□□ -1.35
AP4E1-204ENST00000561004 TMEM131LA2VDJ0 1609 aa6.59□□□□□ -1.35
AP4E1-204ENST00000561004 ANKRD33BA6NCL7 494 aa6.59□□□□□ -1.35
AP4E1-204ENST00000561004 P4HBP07237 508 aaKnown RBP6.59□□□□□ -1.35
AP4E1-204ENST00000561004 HK2P52789 917 aa6.59□□□□□ -1.35
AP4E1-204ENST00000561004 ZNF746Q6NUN9 644 aaPredicted RBP6.59□□□□□ -1.35
AP4E1-204ENST00000561004 GGT6Q6P531 493 aa6.59□□□□□ -1.35
AP4E1-204ENST00000561004 DNAJC14Q6Y2X3 702 aaPredicted RBP6.59□□□□□ -1.35
AP4E1-204ENST00000561004 COX4I2Q96KJ9 171 aa6.59□□□□□ -1.35
AP4E1-204ENST00000561004 BCO2Q9BYV7 579 aa6.59□□□□□ -1.35
AP4E1-204ENST00000561004 ZNF552Q9H707 407 aaPredicted RBP6.59□□□□□ -1.35
AP4E1-204ENST00000561004 FER1L4A9Z1Z3 1794 aa6.59□□□□□ -1.35
AP4E1-204ENST00000561004 MYOCOSA0A1B0GUC4 107 aa6.58□□□□□ -1.36
AP4E1-204ENST00000561004 ZBTB7CA1YPR0 619 aa6.58□□□□□ -1.36
AP4E1-204ENST00000561004 HSPA5P11021 654 aaKnown RBP6.58□□□□□ -1.36
AP4E1-204ENST00000561004 AFF3P51826 1226 aaKnown RBP6.58□□□□□ -1.36
AP4E1-204ENST00000561004 CCDC27Q2M243 656 aa6.58□□□□□ -1.36
AP4E1-204ENST00000561004 UBE2FQ969M7 185 aa6.58□□□□□ -1.36
AP4E1-204ENST00000561004 SIGLEC10Q96LC7 697 aa6.58□□□□□ -1.36
AP4E1-204ENST00000561004 RNF32Q9H0A6 362 aa6.58□□□□□ -1.36
AP4E1-204ENST00000561004 TPX2Q9ULW0 747 aaKnown RBP6.58□□□□□ -1.36
AP4E1-204ENST00000561004 IRAK3Q9Y616 596 aa6.58□□□□□ -1.36
AP4E1-204ENST00000561004 ADGRB3O60242 1522 aa6.58□□□□□ -1.36
AP4E1-204ENST00000561004 C3P01024 1663 aa6.58□□□□□ -1.36
AP4E1-204ENST00000561004 NOS1P29475 1434 aa6.58□□□□□ -1.36
AP4E1-204ENST00000561004 PRAG1Q86YV5 1406 aa6.58□□□□□ -1.36
AP4E1-204ENST00000561004 PRPF40AO75400 957 aaKnown RBP6.57□□□□□ -1.36
AP4E1-204ENST00000561004 LDHBP07195 334 aaKnown RBP6.57□□□□□ -1.36
AP4E1-204ENST00000561004 RGL3Q3MIN7 710 aa6.57□□□□□ -1.36
AP4E1-204ENST00000561004 PI16Q6UXB8 463 aa6.57□□□□□ -1.36
AP4E1-204ENST00000561004 FRMD5Q7Z6J6 570 aa6.57□□□□□ -1.36
AP4E1-204ENST00000561004 PDZD8Q8NEN9 1154 aa6.57□□□□□ -1.36
AP4E1-204ENST00000561004 ANKRD24Q8TF21 1146 aa6.57□□□□□ -1.36
AP4E1-204ENST00000561004 SPG7Q9UQ90 795 aa6.57□□□□□ -1.36
AP4E1-204ENST00000561004 ARHGAP31Q2M1Z3 1444 aa6.57□□□□□ -1.36
AP4E1-204ENST00000561004 ADAMTS20P59510 1910 aa6.56□□□□□ -1.36
AP4E1-204ENST00000561004 SETD1AO15047 1707 aaKnown RBP6.56□□□□□ -1.36
AP4E1-204ENST00000561004 DNAJC25-GNG10A0A024R161 153 aa6.56□□□□□ -1.36
AP4E1-204ENST00000561004 FANCGO15287 622 aa6.56□□□□□ -1.36
AP4E1-204ENST00000561004 LRIG2O94898 1065 aa6.56□□□□□ -1.36
AP4E1-204ENST00000561004 ERVFC1P60507 584 aa6.56□□□□□ -1.36
AP4E1-204ENST00000561004 EAPPQ56P03 285 aaPredicted RBP6.56□□□□□ -1.36
AP4E1-204ENST00000561004 NXPE4Q6UWF7 544 aa6.56□□□□□ -1.36
AP4E1-204ENST00000561004 DTHD1Q6ZMT9 781 aa6.56□□□□□ -1.36
AP4E1-204ENST00000561004 FEZF2Q8TBJ5 459 aa6.56□□□□□ -1.36
AP4E1-204ENST00000561004 EMILIN2Q9BXX0 1053 aa6.56□□□□□ -1.36
AP4E1-204ENST00000561004 WWC3Q9ULE0 1092 aa6.56□□□□□ -1.36
AP4E1-204ENST00000561004 ST14Q9Y5Y6 855 aa6.56□□□□□ -1.36
AP4E1-204ENST00000561004 NEXMIFQ5QGS0 1516 aa6.55□□□□□ -1.36
AP4E1-204ENST00000561004 GSTT1P30711 240 aa6.55□□□□□ -1.36
AP4E1-204ENST00000561004 FCGRTP55899 365 aa6.55□□□□□ -1.36
AP4E1-204ENST00000561004 ZXDAP98168 799 aa6.55□□□□□ -1.36
AP4E1-204ENST00000561004 RALGPS1Q5JS13 557 aa6.55□□□□□ -1.36
AP4E1-204ENST00000561004 ZDHHC14Q8IZN3 488 aa6.55□□□□□ -1.36
AP4E1-204ENST00000561004 SYTL4Q96C24 671 aaPredicted RBP6.55□□□□□ -1.36
AP4E1-204ENST00000561004 GCM1Q9NP62 436 aa6.55□□□□□ -1.36
AP4E1-204ENST00000561004 LUC7LQ9NQ29 371 aaKnown RBP6.55□□□□□ -1.36
AP4E1-204ENST00000561004 ZSWIM5Q9P217 1185 aa6.55□□□□□ -1.36
AP4E1-204ENST00000561004 PPM1HQ9ULR3 514 aa6.55□□□□□ -1.36
AP4E1-204ENST00000561004 SPATA31D1Q6ZQQ2 1576 aa6.55□□□□□ -1.36
AP4E1-204ENST00000561004 UBR1Q8IWV7 1749 aa6.55□□□□□ -1.36
AP4E1-204ENST00000561004 WASHC2AQ641Q2 1341 aa6.54□□□□□ -1.36
AP4E1-204ENST00000561004 WASHC2CQ9Y4E1 1318 aa6.54□□□□□ -1.36
AP4E1-204ENST00000561004 CNTLNQ9NXG0 1405 aa6.54□□□□□ -1.36
AP4E1-204ENST00000561004 FITM1A5D6W6 292 aa6.54□□□□□ -1.36
AP4E1-204ENST00000561004 CYP7A1P22680 504 aa6.54□□□□□ -1.36
AP4E1-204ENST00000561004 PDE6BP35913 854 aa6.54□□□□□ -1.36
AP4E1-204ENST00000561004 DDX10Q13206 875 aaKnown RBP6.54□□□□□ -1.36
AP4E1-204ENST00000561004 SNX17Q15036 470 aa6.54□□□□□ -1.36
AP4E1-204ENST00000561004 ZNF326Q5BKZ1 582 aaKnown RBP6.54□□□□□ -1.36
AP4E1-204ENST00000561004 C3orf58Q8NDZ4 430 aa6.54□□□□□ -1.36
AP4E1-204ENST00000561004 DACT3Q96B18 629 aaPredicted RBP6.54□□□□□ -1.36
AP4E1-204ENST00000561004 ACSBG1Q96GR2 724 aa6.54□□□□□ -1.36
AP4E1-204ENST00000561004 INTS4Q96HW7 963 aaKnown RBP6.54□□□□□ -1.36
AP4E1-204ENST00000561004 SETDB2Q96T68 719 aa6.54□□□□□ -1.36
AP4E1-204ENST00000561004 OSBPL7Q9BZF2 842 aa6.54□□□□□ -1.36
AP4E1-204ENST00000561004 TMEM39AQ9NV64 488 aa6.54□□□□□ -1.36
AP4E1-204ENST00000561004 CAPN6Q9Y6Q1 641 aa6.54□□□□□ -1.36
AP4E1-204ENST00000561004 ERVK-7P63135 1459 aa6.53□□□□□ -1.36
AP4E1-204ENST00000561004 NRXN1Q9ULB1 1477 aa6.53□□□□□ -1.36
AP4E1-204ENST00000561004 ARHGEF28Q8N1W1 1705 aaKnown RBP6.53□□□□□ -1.36
AP4E1-204ENST00000561004 KDM5AP29375 1690 aaKnown RBP6.53□□□□□ -1.36
AP4E1-204ENST00000561004 MYOM1P52179 1685 aa6.53□□□□□ -1.36
AP4E1-204ENST00000561004 SLC22A31A6NKX4 558 aa6.53□□□□□ -1.36
AP4E1-204ENST00000561004 GNA15P30679 374 aa6.53□□□□□ -1.36
AP4E1-204ENST00000561004 ZNF157P51786 506 aaPredicted RBP6.53□□□□□ -1.36
AP4E1-204ENST00000561004 FAAP100Q0VG06 881 aa6.53□□□□□ -1.36
AP4E1-204ENST00000561004 SSPNQ14714 243 aa6.53□□□□□ -1.36
AP4E1-204ENST00000561004 DHX38Q92620 1227 aaKnown RBP6.53□□□□□ -1.36
AP4E1-204ENST00000561004 BDH2Q9BUT1 245 aa6.53□□□□□ -1.36
AP4E1-204ENST00000561004 C12orf49Q9H741 205 aa6.53□□□□□ -1.36
AP4E1-204ENST00000561004 FAM8A1Q9UBU6 413 aa6.53□□□□□ -1.36
AP4E1-204ENST00000561004 YBX2Q9Y2T7 364 aaKnown RBP6.53□□□□□ -1.36
AP4E1-204ENST00000561004 GPRASP1Q5JY77 1395 aa6.53□□□□□ -1.36
AP4E1-204ENST00000561004 MYO3AQ8NEV4 1616 aa6.53□□□□□ -1.36
AP4E1-204ENST00000561004 MYOM2P54296 1465 aa6.53□□□□□ -1.36
AP4E1-204ENST00000561004 RIMS1Q86UR5 1692 aaKnown RBP6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms