RNA–Protein interactions for RNA: ENST00000560986.1

HMG20A-212, Transcript of high mobility group 20A, humanhuman

TSL 2

Gene HMG20A, Length 747 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-212ENST00000560986 NECAB3Q96P71 396 aaPredicted RBP7.06□□□□□ -1.28
HMG20A-212ENST00000560986 TRIM56Q9BRZ2 755 aaKnown RBP7.06□□□□□ -1.28
HMG20A-212ENST00000560986 RSRP1Q9BUV0 290 aa7.06□□□□□ -1.28
HMG20A-212ENST00000560986 SRA1Q9HD15 236 aaKnown RBP7.06□□□□□ -1.28
HMG20A-212ENST00000560986 SEC31BQ9NQW1 1179 aa7.06□□□□□ -1.28
HMG20A-212ENST00000560986 DBF4Q9UBU7 674 aaPredicted RBP7.06□□□□□ -1.28
HMG20A-212ENST00000560986 GPN3Q9UHW5 284 aaPredicted RBP7.06□□□□□ -1.28
HMG20A-212ENST00000560986 RNF112Q9ULX5 631 aa7.06□□□□□ -1.28
HMG20A-212ENST00000560986 THRAP3Q9Y2W1 955 aaKnown RBP7.06□□□□□ -1.28
HMG20A-212ENST00000560986 SIPA1L3O60292 1781 aaPredicted RBP7.05□□□□□ -1.28
HMG20A-212ENST00000560986 LRP6O75581 1613 aa7.05□□□□□ -1.28
HMG20A-212ENST00000560986 FAM177BA6PVY3 158 aa7.05□□□□□ -1.28
HMG20A-212ENST00000560986 BTBD11A6QL63 1104 aa7.05□□□□□ -1.28
HMG20A-212ENST00000560986 ENC1O14682 589 aa7.05□□□□□ -1.28
HMG20A-212ENST00000560986 CELA3AP09093 270 aa7.05□□□□□ -1.28
HMG20A-212ENST00000560986 CDC27P30260 824 aa7.05□□□□□ -1.28
HMG20A-212ENST00000560986 PCDH1Q08174 1060 aa7.05□□□□□ -1.28
HMG20A-212ENST00000560986 ZNF654Q8IZM8 581 aa7.05□□□□□ -1.28
HMG20A-212ENST00000560986 LTV1Q96GA3 475 aaPredicted RBP7.05□□□□□ -1.28
HMG20A-212ENST00000560986 ACBD3Q9H3P7 528 aa7.05□□□□□ -1.28
HMG20A-212ENST00000560986 AKTIPQ9H8T0 292 aa7.05□□□□□ -1.28
HMG20A-212ENST00000560986 SLC52A2Q9HAB3 445 aa7.05□□□□□ -1.28
HMG20A-212ENST00000560986 COPRSQ9NQ92 184 aa7.05□□□□□ -1.28
HMG20A-212ENST00000560986 KBTBD4Q9NVX7 518 aa7.05□□□□□ -1.28
HMG20A-212ENST00000560986 HYPKQ9NX55 129 aa7.05□□□□□ -1.28
HMG20A-212ENST00000560986 PLCH1Q4KWH8 1693 aa7.05□□□□□ -1.28
HMG20A-212ENST00000560986 ROBO1Q9Y6N7 1651 aa7.04□□□□□ -1.28
HMG20A-212ENST00000560986 DDX58O95786 925 aaKnown RBP7.04□□□□□ -1.28
HMG20A-212ENST00000560986 IL2RBP14784 551 aa7.04□□□□□ -1.28
HMG20A-212ENST00000560986 PWP1Q13610 501 aa7.04□□□□□ -1.28
HMG20A-212ENST00000560986 MAP3K11Q16584 847 aa7.04□□□□□ -1.28
HMG20A-212ENST00000560986 ZNF423Q2M1K9 1284 aa7.04□□□□□ -1.28
HMG20A-212ENST00000560986 RELL1Q8IUW5 271 aa7.04□□□□□ -1.28
HMG20A-212ENST00000560986 TMEM130Q8N3G9 435 aa7.04□□□□□ -1.28
HMG20A-212ENST00000560986 IL22RA1Q8N6P7 574 aa7.04□□□□□ -1.28
HMG20A-212ENST00000560986 SH2B1Q9NRF2 756 aaPredicted RBP7.04□□□□□ -1.28
HMG20A-212ENST00000560986 TMEM39AQ9NV64 488 aa7.04□□□□□ -1.28
HMG20A-212ENST00000560986 MEGF6O75095 1541 aa7.04□□□□□ -1.28
HMG20A-212ENST00000560986 SCN11AQ9UI33 1791 aa7.04□□□□□ -1.28
HMG20A-212ENST00000560986 F8W735 103 aaPredicted RBP7.03□□□□□ -1.28
HMG20A-212ENST00000560986 ALDH1L1O75891 902 aa7.03□□□□□ -1.28
HMG20A-212ENST00000560986 B3GALT4O96024 378 aa7.03□□□□□ -1.28
HMG20A-212ENST00000560986 ESRRAP11474 423 aaPredicted RBP7.03□□□□□ -1.28
HMG20A-212ENST00000560986 EPHA1P21709 976 aa7.03□□□□□ -1.28
HMG20A-212ENST00000560986 ZNF157P51786 506 aaPredicted RBP7.03□□□□□ -1.28
HMG20A-212ENST00000560986 CABP4P57796 275 aa7.03□□□□□ -1.28
HMG20A-212ENST00000560986 NUCB1Q02818 461 aa7.03□□□□□ -1.28
HMG20A-212ENST00000560986 SETDB1Q15047 1291 aa7.03□□□□□ -1.28
HMG20A-212ENST00000560986 ZNF790Q6PG37 636 aa7.03□□□□□ -1.28
HMG20A-212ENST00000560986 ANKRD44Q8N8A2 993 aa7.03□□□□□ -1.28
HMG20A-212ENST00000560986 TINF2Q9BSI4 451 aa7.03□□□□□ -1.28
HMG20A-212ENST00000560986 COL15A1P39059 1388 aa7.03□□□□□ -1.28
HMG20A-212ENST00000560986 DISP2A7MBM2 1401 aa7.02□□□□□ -1.29
HMG20A-212ENST00000560986 KDM6AO15550 1401 aaPredicted RBP7.02□□□□□ -1.29
HMG20A-212ENST00000560986 F6X3S4 739 aa7.02□□□□□ -1.29
HMG20A-212ENST00000560986 H3BRJ5 948 aa7.02□□□□□ -1.29
HMG20A-212ENST00000560986 PAGE1O75459 146 aa7.02□□□□□ -1.29
HMG20A-212ENST00000560986 IGHDP01880 384 aa7.02□□□□□ -1.29
HMG20A-212ENST00000560986 GBP2P32456 591 aaPredicted RBP7.02□□□□□ -1.29
HMG20A-212ENST00000560986 ANP32AP39687 249 aaKnown RBP7.02□□□□□ -1.29
HMG20A-212ENST00000560986 LIG3P49916 1009 aa7.02□□□□□ -1.29
HMG20A-212ENST00000560986 PPP2R3AQ06190 1150 aa7.02□□□□□ -1.29
HMG20A-212ENST00000560986 IKBKEQ14164 716 aa7.02□□□□□ -1.29
HMG20A-212ENST00000560986 TOM1L2Q6ZVM7 507 aa7.02□□□□□ -1.29
HMG20A-212ENST00000560986 USHBP1Q8N6Y0 703 aa7.02□□□□□ -1.29
HMG20A-212ENST00000560986 ZCRB1Q8TBF4 217 aaKnown RBP7.02□□□□□ -1.29
HMG20A-212ENST00000560986 TMEM74Q96NL1 305 aa7.02□□□□□ -1.29
HMG20A-212ENST00000560986 FMNL2Q96PY5 1086 aa7.02□□□□□ -1.29
HMG20A-212ENST00000560986 TEX13AQ9BXU3 409 aaPredicted RBP7.02□□□□□ -1.29
HMG20A-212ENST00000560986 CAPN10Q9HC96 672 aa7.02□□□□□ -1.29
HMG20A-212ENST00000560986 DDX21Q9NR30 783 aaKnown RBP eCLIP7.02□□□□□ -1.29
HMG20A-212ENST00000560986 TNS2Q63HR2 1409 aa7.01□□□□□ -1.29
HMG20A-212ENST00000560986 COL16A1Q07092 1604 aaPredicted RBP7.01□□□□□ -1.29
HMG20A-212ENST00000560986 NWD2Q9ULI1 1742 aa7.01□□□□□ -1.29
HMG20A-212ENST00000560986 MINDY4BA8MYZ0 360 aa7.01□□□□□ -1.29
HMG20A-212ENST00000560986 ELL2O00472 640 aaPredicted RBP7.01□□□□□ -1.29
HMG20A-212ENST00000560986 SOX1O00570 391 aaPredicted RBP7.01□□□□□ -1.29
HMG20A-212ENST00000560986 GNAI2P04899 355 aa7.01□□□□□ -1.29
HMG20A-212ENST00000560986 SNRPA1P09661 255 aaKnown RBP7.01□□□□□ -1.29
HMG20A-212ENST00000560986 CDC25BP30305 580 aa7.01□□□□□ -1.29
HMG20A-212ENST00000560986 TNNI2P48788 182 aa7.01□□□□□ -1.29
HMG20A-212ENST00000560986 MTX1Q13505 466 aa7.01□□□□□ -1.29
HMG20A-212ENST00000560986 HSP90AB4PQ58FF6 505 aa7.01□□□□□ -1.29
HMG20A-212ENST00000560986 BMP2KLQ5H9B9 411 aa7.01□□□□□ -1.29
HMG20A-212ENST00000560986 TTBK2Q6IQ55 1244 aa7.01□□□□□ -1.29
HMG20A-212ENST00000560986 TTC5Q8N0Z6 440 aa7.01□□□□□ -1.29
HMG20A-212ENST00000560986 MRPL18Q9H0U6 180 aaKnown RBP7.01□□□□□ -1.29
HMG20A-212ENST00000560986 DCTPP1Q9H773 170 aa7.01□□□□□ -1.29
HMG20A-212ENST00000560986 UPF2Q9HAU5 1272 aaKnown RBP7.01□□□□□ -1.29
HMG20A-212ENST00000560986 LGR6Q9HBX8 967 aa7.01□□□□□ -1.29
HMG20A-212ENST00000560986 PPME1Q9Y570 386 aa7.01□□□□□ -1.29
HMG20A-212ENST00000560986 RGPD2P0DJD1 1756 aa7□□□□□ -1.29
HMG20A-212ENST00000560986 RGPD5Q99666 1765 aa7□□□□□ -1.29
HMG20A-212ENST00000560986 CYP27B1O15528 508 aa7□□□□□ -1.29
HMG20A-212ENST00000560986 FSTP19883 344 aa7□□□□□ -1.29
HMG20A-212ENST00000560986 HMGB2P26583 209 aaKnown RBP7□□□□□ -1.29
HMG20A-212ENST00000560986 EVA1CP58658 441 aa7□□□□□ -1.29
HMG20A-212ENST00000560986 GNL2Q13823 731 aaKnown RBP7□□□□□ -1.29
HMG20A-212ENST00000560986 PCNX4Q63HM2 1172 aa7□□□□□ -1.29
HMG20A-212ENST00000560986 KSR2Q6VAB6 950 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms