RNA–Protein interactions for RNA: ENST00000560927.1

CRTC3-210, Transcript of CREB regulated transcription coactivator 3, humanhuman

TSL 2

Gene CRTC3, Length 2,463 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRTC3-210ENST00000560927 NAALADL2Q58DX5 795 aa16.53■□□□□ 0.24
CRTC3-210ENST00000560927 RPGRQ92834 1020 aaKnown RBP16.53■□□□□ 0.24
CRTC3-210ENST00000560927 BARHL2Q9NY43 387 aa16.53■□□□□ 0.24
CRTC3-210ENST00000560927 LY75O60449 1722 aa16.53■□□□□ 0.24
CRTC3-210ENST00000560927 STAT6P42226 847 aa16.52■□□□□ 0.24
CRTC3-210ENST00000560927 GNG11P61952 73 aa16.52■□□□□ 0.24
CRTC3-210ENST00000560927 C15orf52Q6ZUT6 534 aaKnown RBP16.52■□□□□ 0.24
CRTC3-210ENST00000560927 PANX2Q96RD6 677 aa16.52■□□□□ 0.24
CRTC3-210ENST00000560927 CTAGE1Q96RT6 745 aa16.52■□□□□ 0.24
CRTC3-210ENST00000560927 MRPL44Q9H9J2 332 aaKnown RBP16.52■□□□□ 0.24
CRTC3-210ENST00000560927 DISC1Q9NRI5 854 aa16.52■□□□□ 0.24
CRTC3-210ENST00000560927 OGFRQ9NZT2 677 aa16.52■□□□□ 0.24
CRTC3-210ENST00000560927 SNED1Q8TER0 1413 aa16.52■□□□□ 0.24
CRTC3-210ENST00000560927 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.52■□□□□ 0.23
CRTC3-210ENST00000560927 LDHCP07864 332 aa16.52■□□□□ 0.23
CRTC3-210ENST00000560927 ZSCAN20P17040 1043 aaPredicted RBP16.52■□□□□ 0.23
CRTC3-210ENST00000560927 CDK8P49336 464 aa16.52■□□□□ 0.23
CRTC3-210ENST00000560927 KRT31Q15323 416 aa16.52■□□□□ 0.23
CRTC3-210ENST00000560927 RAD9BQ6WBX8 426 aa16.52■□□□□ 0.23
CRTC3-210ENST00000560927 PPFIBP1Q86W92 1011 aa16.52■□□□□ 0.23
CRTC3-210ENST00000560927 PLIN2Q99541 437 aa16.52■□□□□ 0.23
CRTC3-210ENST00000560927 PYM1Q9BRP8 204 aaKnown RBP16.52■□□□□ 0.23
CRTC3-210ENST00000560927 RWDD2AQ9UIY3 292 aa16.52■□□□□ 0.23
CRTC3-210ENST00000560927 A0A0U1RQJ8 604 aa16.51■□□□□ 0.23
CRTC3-210ENST00000560927 KLRF2D3W0D1 207 aa16.51■□□□□ 0.23
CRTC3-210ENST00000560927 GYPCP04921 128 aa16.51■□□□□ 0.23
CRTC3-210ENST00000560927 CASP14P31944 242 aa16.51■□□□□ 0.23
CRTC3-210ENST00000560927 PAK1Q13153 545 aa16.51■□□□□ 0.23
CRTC3-210ENST00000560927 CCDC178Q5BJE1 867 aa16.51■□□□□ 0.23
CRTC3-210ENST00000560927 ZNF658Q5TYW1 1059 aaPredicted RBP16.51■□□□□ 0.23
CRTC3-210ENST00000560927 DTHD1Q6ZMT9 781 aa16.51■□□□□ 0.23
CRTC3-210ENST00000560927 DAGLBQ8NCG7 672 aa16.51■□□□□ 0.23
CRTC3-210ENST00000560927 NELFBQ8WX92 580 aa16.51■□□□□ 0.23
CRTC3-210ENST00000560927 ATRIPQ8WXE1 791 aa16.51■□□□□ 0.23
CRTC3-210ENST00000560927 EYA3Q99504 573 aa16.51■□□□□ 0.23
CRTC3-210ENST00000560927 EP400Q96L91 3159 aa16.51■□□□□ 0.23
CRTC3-210ENST00000560927 UBAP1LF5GYI3 381 aa16.51■□□□□ 0.23
CRTC3-210ENST00000560927 MFAP3LO75121 409 aa16.51■□□□□ 0.23
CRTC3-210ENST00000560927 TXLNAP40222 546 aa16.51■□□□□ 0.23
CRTC3-210ENST00000560927 PRCPP42785 496 aa16.51■□□□□ 0.23
CRTC3-210ENST00000560927 NT5C2P49902 561 aa16.51■□□□□ 0.23
CRTC3-210ENST00000560927 FXR1P51114 621 aaKnown RBP eCLIP16.51■□□□□ 0.23
CRTC3-210ENST00000560927 TEX11Q8IYF3 940 aa16.51■□□□□ 0.23
CRTC3-210ENST00000560927 CCDC148Q8NFR7 591 aa16.51■□□□□ 0.23
CRTC3-210ENST00000560927 LRRC15Q8TF66 581 aa16.51■□□□□ 0.23
CRTC3-210ENST00000560927 CARD6Q9BX69 1037 aa16.51■□□□□ 0.23
CRTC3-210ENST00000560927 IRX2Q9BZI1 471 aaPredicted RBP16.51■□□□□ 0.23
CRTC3-210ENST00000560927 ZNF446Q9NWS9 450 aa16.51■□□□□ 0.23
CRTC3-210ENST00000560927 GPR75-ASB3A0A0A6YYF3 556 aa16.5■□□□□ 0.23
CRTC3-210ENST00000560927 CRY2Q49AN0 593 aa16.5■□□□□ 0.23
CRTC3-210ENST00000560927 FILIP1LQ4L180 1135 aa16.5■□□□□ 0.23
CRTC3-210ENST00000560927 USP17L2Q6R6M4 530 aa16.5■□□□□ 0.23
CRTC3-210ENST00000560927 C16orf86Q6ZW13 317 aa16.5■□□□□ 0.23
CRTC3-210ENST00000560927 VPS16Q9H269 839 aa16.5■□□□□ 0.23
CRTC3-210ENST00000560927 LIMA1Q9UHB6 759 aaKnown RBP16.5■□□□□ 0.23
CRTC3-210ENST00000560927 FLT1P17948 1338 aa16.5■□□□□ 0.23
CRTC3-210ENST00000560927 GOLGA6L9A6NEM1 432 aa16.5■□□□□ 0.23
CRTC3-210ENST00000560927 IGSF3O75054 1194 aa16.5■□□□□ 0.23
CRTC3-210ENST00000560927 ARHGAP29Q52LW3 1261 aa16.5■□□□□ 0.23
CRTC3-210ENST00000560927 CREBRFQ8IUR6 639 aa16.5■□□□□ 0.23
CRTC3-210ENST00000560927 KIFC2Q96AC6 838 aa16.5■□□□□ 0.23
CRTC3-210ENST00000560927 TAB2Q9NYJ8 693 aa16.5■□□□□ 0.23
CRTC3-210ENST00000560927 DDX60LQ5H9U9 1706 aaKnown RBP16.49■□□□□ 0.23
CRTC3-210ENST00000560927 TRIM49BA6NDI0 452 aa16.49■□□□□ 0.23
CRTC3-210ENST00000560927 LRRC10BA6NIK2 292 aa16.49■□□□□ 0.23
CRTC3-210ENST00000560927 RNF225M0QZC1 329 aaPredicted RBP16.49■□□□□ 0.23
CRTC3-210ENST00000560927 GYS1P13807 737 aa16.49■□□□□ 0.23
CRTC3-210ENST00000560927 IL1R1P14778 569 aa16.49■□□□□ 0.23
CRTC3-210ENST00000560927 H2AFXP16104 143 aaPredicted RBP16.49■□□□□ 0.23
CRTC3-210ENST00000560927 CASQ1P31415 396 aa16.49■□□□□ 0.23
CRTC3-210ENST00000560927 RHBDL3P58872 404 aa16.49■□□□□ 0.23
CRTC3-210ENST00000560927 MFSD14BQ5SR56 506 aa16.49■□□□□ 0.23
CRTC3-210ENST00000560927 RASSF8Q8NHQ8 419 aa16.49■□□□□ 0.23
CRTC3-210ENST00000560927 GGA1Q9UJY5 639 aa16.49■□□□□ 0.23
CRTC3-210ENST00000560927 CDK5RAP2Q96SN8 1893 aa16.49■□□□□ 0.23
CRTC3-210ENST00000560927 N4BP3O15049 544 aa16.48■□□□□ 0.23
CRTC3-210ENST00000560927 COPB1P53618 953 aaKnown RBP16.48■□□□□ 0.23
CRTC3-210ENST00000560927 TCP11X2Q5H9J9 407 aa16.48■□□□□ 0.23
CRTC3-210ENST00000560927 CERKQ8TCT0 537 aa16.48■□□□□ 0.23
CRTC3-210ENST00000560927 CEP95Q96GE4 821 aa16.48■□□□□ 0.23
CRTC3-210ENST00000560927 RMND1Q9NWS8 449 aa16.48■□□□□ 0.23
CRTC3-210ENST00000560927 POLLQ9UGP5 575 aa16.48■□□□□ 0.23
CRTC3-210ENST00000560927 ADGRG1Q9Y653 693 aa16.48■□□□□ 0.23
CRTC3-210ENST00000560927 KCNJ18B7U540 433 aa16.48■□□□□ 0.23
CRTC3-210ENST00000560927 TADA3O75528 432 aa16.48■□□□□ 0.23
CRTC3-210ENST00000560927 SERPINB2P05120 415 aa16.48■□□□□ 0.23
CRTC3-210ENST00000560927 CCDC175P0C221 793 aa16.48■□□□□ 0.23
CRTC3-210ENST00000560927 ATP2B4P23634 1241 aa16.48■□□□□ 0.23
CRTC3-210ENST00000560927 PMS1P54277 932 aaKnown RBP16.48■□□□□ 0.23
CRTC3-210ENST00000560927 NAPAP54920 295 aa16.48■□□□□ 0.23
CRTC3-210ENST00000560927 KCNJ12Q14500 433 aa16.48■□□□□ 0.23
CRTC3-210ENST00000560927 GALNT17Q6IS24 598 aa16.48■□□□□ 0.23
CRTC3-210ENST00000560927 MNS1Q8NEH6 495 aa16.48■□□□□ 0.23
CRTC3-210ENST00000560927 NEDD1Q8NHV4 660 aa16.48■□□□□ 0.23
CRTC3-210ENST00000560927 SPZ1Q9BXG8 430 aa16.48■□□□□ 0.23
CRTC3-210ENST00000560927 ZMYND12Q9H0C1 365 aa16.48■□□□□ 0.23
CRTC3-210ENST00000560927 LZTFL1Q9NQ48 299 aa16.48■□□□□ 0.23
CRTC3-210ENST00000560927 UBA7P41226 1012 aa16.47■□□□□ 0.23
CRTC3-210ENST00000560927 MAP3K9P80192 1104 aa16.47■□□□□ 0.23
CRTC3-210ENST00000560927 VAT1LQ9HCJ6 419 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms