RNA–Protein interactions for RNA: ENST00000560909.2

ZEB1-220, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 4

Gene ZEB1, Length 564 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-220ENST00000560909 PPP1R26Q5T8A7 1209 aaPredicted RBP6.52□□□□□ -1.37
ZEB1-220ENST00000560909 C12orf60Q5U649 245 aa6.52□□□□□ -1.37
ZEB1-220ENST00000560909 CTR9Q6PD62 1173 aa6.52□□□□□ -1.37
ZEB1-220ENST00000560909 KIAA1211Q6ZU35 1233 aa6.52□□□□□ -1.37
ZEB1-220ENST00000560909 USP50Q70EL3 339 aaPredicted RBP6.52□□□□□ -1.37
ZEB1-220ENST00000560909 TEX11Q8IYF3 940 aa6.52□□□□□ -1.37
ZEB1-220ENST00000560909 KLRG1Q96E93 195 aa6.52□□□□□ -1.37
ZEB1-220ENST00000560909 KIF2CQ99661 725 aa6.52□□□□□ -1.37
ZEB1-220ENST00000560909 NACAP1Q9BZK3 213 aa6.52□□□□□ -1.37
ZEB1-220ENST00000560909 GPCPD1Q9NPB8 672 aa6.52□□□□□ -1.37
ZEB1-220ENST00000560909 ANO2Q9NQ90 1003 aa6.52□□□□□ -1.37
ZEB1-220ENST00000560909 DDX4Q9NQI0 724 aaKnown RBP6.52□□□□□ -1.37
ZEB1-220ENST00000560909 ADARB2Q9NS39 739 aaKnown RBP6.52□□□□□ -1.37
ZEB1-220ENST00000560909 USP40Q9NVE5 1235 aa6.52□□□□□ -1.37
ZEB1-220ENST00000560909 RBM8AQ9Y5S9 174 aaKnown RBP6.52□□□□□ -1.37
ZEB1-220ENST00000560909 GJA3Q9Y6H8 435 aa6.52□□□□□ -1.37
ZEB1-220ENST00000560909 SLC4A4Q9Y6R1 1079 aa6.52□□□□□ -1.37
ZEB1-220ENST00000560909 MAST2Q6P0Q8 1798 aa6.52□□□□□ -1.37
ZEB1-220ENST00000560909 FLT1P17948 1338 aa6.51□□□□□ -1.37
ZEB1-220ENST00000560909 IQCA1LA6NCM1 817 aa6.51□□□□□ -1.37
ZEB1-220ENST00000560909 SLC27A2O14975 620 aa6.51□□□□□ -1.37
ZEB1-220ENST00000560909 CYP21A2P08686 494 aa6.51□□□□□ -1.37
ZEB1-220ENST00000560909 PCP11498 1178 aaKnown RBP6.51□□□□□ -1.37
ZEB1-220ENST00000560909 ELNP15502 786 aa6.51□□□□□ -1.37
ZEB1-220ENST00000560909 KIF4BQ2VIQ3 1234 aa6.51□□□□□ -1.37
ZEB1-220ENST00000560909 FOXD4L5Q5VV16 416 aaPredicted RBP6.51□□□□□ -1.37
ZEB1-220ENST00000560909 CREB3L3Q68CJ9 461 aa6.51□□□□□ -1.37
ZEB1-220ENST00000560909 SH3BP5LQ7L8J4 393 aa6.51□□□□□ -1.37
ZEB1-220ENST00000560909 LYSMD3Q7Z3D4 306 aa6.51□□□□□ -1.37
ZEB1-220ENST00000560909 FBXL16Q8N461 479 aa6.51□□□□□ -1.37
ZEB1-220ENST00000560909 TRPM4Q8TD43 1214 aa6.51□□□□□ -1.37
ZEB1-220ENST00000560909 TGFBRAP1Q8WUH2 860 aa6.51□□□□□ -1.37
ZEB1-220ENST00000560909 SDR42E1Q8WUS8 393 aa6.51□□□□□ -1.37
ZEB1-220ENST00000560909 FAM151AQ8WW52 585 aa6.51□□□□□ -1.37
ZEB1-220ENST00000560909 TEPSINQ96N21 525 aa6.51□□□□□ -1.37
ZEB1-220ENST00000560909 NOL10Q9BSC4 688 aaKnown RBP6.51□□□□□ -1.37
ZEB1-220ENST00000560909 TM6SF1Q9BZW5 370 aa6.51□□□□□ -1.37
ZEB1-220ENST00000560909 OSBPL5Q9H0X9 879 aaPredicted RBP6.51□□□□□ -1.37
ZEB1-220ENST00000560909 EHD4Q9H223 541 aa6.51□□□□□ -1.37
ZEB1-220ENST00000560909 DHX36Q9H2U1 1008 aaKnown RBP6.51□□□□□ -1.37
ZEB1-220ENST00000560909 TAF1DQ9H5J8 278 aaPredicted RBP6.51□□□□□ -1.37
ZEB1-220ENST00000560909 TDRD3Q9H7E2 651 aaKnown RBP6.51□□□□□ -1.37
ZEB1-220ENST00000560909 ZNF395Q9H8N7 513 aaPredicted RBP6.51□□□□□ -1.37
ZEB1-220ENST00000560909 HACL1Q9UJ83 578 aa6.51□□□□□ -1.37
ZEB1-220ENST00000560909 MAP4K5Q9Y4K4 846 aa6.51□□□□□ -1.37
ZEB1-220ENST00000560909 TACC3Q9Y6A5 838 aa6.51□□□□□ -1.37
ZEB1-220ENST00000560909 CNTNAP1P78357 1384 aa6.51□□□□□ -1.37
ZEB1-220ENST00000560909 ROBO3Q96MS0 1386 aa6.51□□□□□ -1.37
ZEB1-220ENST00000560909 WDR90Q96KV7 1748 aa6.5□□□□□ -1.37
ZEB1-220ENST00000560909 MYH7P12883 1935 aa6.5□□□□□ -1.37
ZEB1-220ENST00000560909 MYH13Q9UKX3 1938 aa6.5□□□□□ -1.37
ZEB1-220ENST00000560909 CCDC88AQ3V6T2 1871 aa6.5□□□□□ -1.37
ZEB1-220ENST00000560909 USP17L12C9JPN9 530 aa6.5□□□□□ -1.37
ZEB1-220ENST00000560909 USP17L21D6R901 530 aa6.5□□□□□ -1.37
ZEB1-220ENST00000560909 ORC4O43929 436 aa6.5□□□□□ -1.37
ZEB1-220ENST00000560909 VEGFAP15692 232 aaPredicted RBP6.5□□□□□ -1.37
ZEB1-220ENST00000560909 LMOD1P29536 600 aaPredicted RBP6.5□□□□□ -1.37
ZEB1-220ENST00000560909 CTHP32929 405 aa6.5□□□□□ -1.37
ZEB1-220ENST00000560909 EPHX2P34913 555 aa6.5□□□□□ -1.37
ZEB1-220ENST00000560909 DGKGP49619 791 aa6.5□□□□□ -1.37
ZEB1-220ENST00000560909 TBC1D10BQ4KMP7 808 aaPredicted RBP6.5□□□□□ -1.37
ZEB1-220ENST00000560909 PNMA8AQ86V59 439 aaPredicted RBP6.5□□□□□ -1.37
ZEB1-220ENST00000560909 FOXP4Q8IVH2 680 aaPredicted RBP6.5□□□□□ -1.37
ZEB1-220ENST00000560909 ZFPM1Q8IX07 1006 aa6.5□□□□□ -1.37
ZEB1-220ENST00000560909 KRI1Q8N9T8 703 aaKnown RBP6.5□□□□□ -1.37
ZEB1-220ENST00000560909 STAG1Q8WVM7 1258 aa6.5□□□□□ -1.37
ZEB1-220ENST00000560909 MTA3Q9BTC8 594 aa6.5□□□□□ -1.37
ZEB1-220ENST00000560909 C22orf23Q9BZE7 217 aa6.5□□□□□ -1.37
ZEB1-220ENST00000560909 NAPBQ9H115 298 aa6.5□□□□□ -1.37
ZEB1-220ENST00000560909 ARPP21Q9UBL0 812 aaPredicted RBP6.5□□□□□ -1.37
ZEB1-220ENST00000560909 PALD1Q9ULE6 856 aa6.5□□□□□ -1.37
ZEB1-220ENST00000560909 DDX52Q9Y2R4 599 aaKnown RBP eCLIP6.5□□□□□ -1.37
ZEB1-220ENST00000560909 PPP2R3BQ9Y5P8 575 aa6.5□□□□□ -1.37
ZEB1-220ENST00000560909 SNX14Q9Y5W7 946 aa6.5□□□□□ -1.37
ZEB1-220ENST00000560909 TAF6LQ9Y6J9 622 aa6.5□□□□□ -1.37
ZEB1-220ENST00000560909 MYH2Q9UKX2 1941 aa6.5□□□□□ -1.37
ZEB1-220ENST00000560909 ASTN2O75129 1339 aaPredicted RBP6.5□□□□□ -1.37
ZEB1-220ENST00000560909 DDTLA6NHG4 134 aaPredicted RBP6.49□□□□□ -1.37
ZEB1-220ENST00000560909 SMIM22K7EJ46 135 aa6.49□□□□□ -1.37
ZEB1-220ENST00000560909 ZNF213O14771 459 aa6.49□□□□□ -1.37
ZEB1-220ENST00000560909 MYO1BO43795 1136 aa6.49□□□□□ -1.37
ZEB1-220ENST00000560909 RHOQP17081 205 aa6.49□□□□□ -1.37
ZEB1-220ENST00000560909 USP5P45974 858 aa6.49□□□□□ -1.37
ZEB1-220ENST00000560909 NOVP48745 357 aa6.49□□□□□ -1.37
ZEB1-220ENST00000560909 PLCD1P51178 756 aa6.49□□□□□ -1.37
ZEB1-220ENST00000560909 IRAK1P51617 712 aa6.49□□□□□ -1.37
ZEB1-220ENST00000560909 RBM5P52756 815 aaKnown RBP eCLIP6.49□□□□□ -1.37
ZEB1-220ENST00000560909 PPARAQ07869 468 aa6.49□□□□□ -1.37
ZEB1-220ENST00000560909 TNFAIP1Q13829 316 aa6.49□□□□□ -1.37
ZEB1-220ENST00000560909 KRT32Q14532 448 aa6.49□□□□□ -1.37
ZEB1-220ENST00000560909 RASA3Q14644 834 aa6.49□□□□□ -1.37
ZEB1-220ENST00000560909 AMHR2Q16671 573 aa6.49□□□□□ -1.37
ZEB1-220ENST00000560909 IMMTQ16891 758 aaKnown RBP6.49□□□□□ -1.37
ZEB1-220ENST00000560909 RNF20Q5VTR2 975 aa6.49□□□□□ -1.37
ZEB1-220ENST00000560909 TATDN1Q6P1N9 297 aa6.49□□□□□ -1.37
ZEB1-220ENST00000560909 STOX1Q6ZVD7 989 aa6.49□□□□□ -1.37
ZEB1-220ENST00000560909 C16orf86Q6ZW13 317 aa6.49□□□□□ -1.37
ZEB1-220ENST00000560909 TTC6Q86TZ1 520 aa6.49□□□□□ -1.37
ZEB1-220ENST00000560909 BPHLQ86WA6 291 aaPredicted RBP6.49□□□□□ -1.37
ZEB1-220ENST00000560909 APOBEC3FQ8IUX4 373 aaKnown RBP6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms