RNA–Protein interactions for RNA: ENST00000560619.2

SNRPCP18-201, Transcript of small nuclear ribonucleoprotein polypeptide C pseudogene 18, humanhuman

BASIC

Gene SNRPCP18, Length 439 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPCP18-201ENST00000560619 CNMDO75829 334 aa13.02□□□□□ -0.33
SNRPCP18-201ENST00000560619 DDAH1O94760 285 aa13.02□□□□□ -0.33
SNRPCP18-201ENST00000560619 PARP1P09874 1014 aaKnown RBP13.02□□□□□ -0.33
SNRPCP18-201ENST00000560619 ANP32AP39687 249 aaKnown RBP13.02□□□□□ -0.33
SNRPCP18-201ENST00000560619 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.02□□□□□ -0.33
SNRPCP18-201ENST00000560619 CTU1Q7Z7A3 348 aaKnown RBP13.02□□□□□ -0.33
SNRPCP18-201ENST00000560619 CATIPQ7Z7H3 387 aa13.02□□□□□ -0.33
SNRPCP18-201ENST00000560619 REPS2Q8NFH8 660 aa13.02□□□□□ -0.33
SNRPCP18-201ENST00000560619 LZTS2Q9BRK4 669 aa13.02□□□□□ -0.33
SNRPCP18-201ENST00000560619 SPATC1LQ9H0A9 340 aa13.02□□□□□ -0.33
SNRPCP18-201ENST00000560619 ALDH8A1Q9H2A2 487 aaPredicted RBP13.02□□□□□ -0.33
SNRPCP18-201ENST00000560619 MROH8Q9H579 483 aa13.02□□□□□ -0.33
SNRPCP18-201ENST00000560619 PALM3A6NDB9 673 aaPredicted RBP13.01□□□□□ -0.33
SNRPCP18-201ENST00000560619 RPS6KB1P23443 525 aa13.01□□□□□ -0.33
SNRPCP18-201ENST00000560619 PSMC4P43686 418 aa13.01□□□□□ -0.33
SNRPCP18-201ENST00000560619 GNAQP50148 359 aa13.01□□□□□ -0.33
SNRPCP18-201ENST00000560619 EVCP57679 992 aa13.01□□□□□ -0.33
SNRPCP18-201ENST00000560619 Q3C1V9 767 aa13.01□□□□□ -0.33
SNRPCP18-201ENST00000560619 KCTD1Q719H9 257 aa13.01□□□□□ -0.33
SNRPCP18-201ENST00000560619 RUFY3Q7L099 469 aa13.01□□□□□ -0.33
SNRPCP18-201ENST00000560619 RIOX2Q8IUF8 465 aa13.01□□□□□ -0.33
SNRPCP18-201ENST00000560619 ABRAQ8N0Z2 381 aa13.01□□□□□ -0.33
SNRPCP18-201ENST00000560619 COA7Q96BR5 231 aa13.01□□□□□ -0.33
SNRPCP18-201ENST00000560619 ATG4CQ96DT6 458 aa13.01□□□□□ -0.33
SNRPCP18-201ENST00000560619 JAKMIP1Q96N16 626 aaKnown RBP13.01□□□□□ -0.33
SNRPCP18-201ENST00000560619 NUP88Q99567 741 aaPredicted RBP13.01□□□□□ -0.33
SNRPCP18-201ENST00000560619 TEX13BQ9BXU2 312 aa13.01□□□□□ -0.33
SNRPCP18-201ENST00000560619 EFCC1Q9HA90 598 aa13.01□□□□□ -0.33
SNRPCP18-201ENST00000560619 FBXO28Q9NVF7 368 aa13.01□□□□□ -0.33
SNRPCP18-201ENST00000560619 BTBD7Q9P203 1132 aa13.01□□□□□ -0.33
SNRPCP18-201ENST00000560619 ZNF214Q9UL59 606 aaPredicted RBP13.01□□□□□ -0.33
SNRPCP18-201ENST00000560619 CCDC69A6NI79 296 aa13□□□□□ -0.33
SNRPCP18-201ENST00000560619 KIF5BP33176 963 aa13□□□□□ -0.33
SNRPCP18-201ENST00000560619 STAT3P40763 770 aa13□□□□□ -0.33
SNRPCP18-201ENST00000560619 GRM4Q14833 912 aa13□□□□□ -0.33
SNRPCP18-201ENST00000560619 TMEM132BQ14DG7 1078 aa13□□□□□ -0.33
SNRPCP18-201ENST00000560619 CCDC96Q2M329 555 aa13□□□□□ -0.33
SNRPCP18-201ENST00000560619 TKFCQ3LXA3 575 aa13□□□□□ -0.33
SNRPCP18-201ENST00000560619 SYNE3Q6ZMZ3 975 aa13□□□□□ -0.33
SNRPCP18-201ENST00000560619 CHST3Q7LGC8 479 aa13□□□□□ -0.33
SNRPCP18-201ENST00000560619 OTOP1Q7RTM1 612 aa13□□□□□ -0.33
SNRPCP18-201ENST00000560619 CD99L2Q8TCZ2 262 aa13□□□□□ -0.33
SNRPCP18-201ENST00000560619 RANBP17Q9H2T7 1088 aaKnown RBP13□□□□□ -0.33
SNRPCP18-201ENST00000560619 PRR12Q9ULL5 1215 aa13□□□□□ -0.33
SNRPCP18-201ENST00000560619 CYP46A1Q9Y6A2 500 aa13□□□□□ -0.33
SNRPCP18-201ENST00000560619 DOCK3Q8IZD9 2030 aa13□□□□□ -0.33
SNRPCP18-201ENST00000560619 COL11A1P12107 1806 aaPredicted RBP12.99□□□□□ -0.33
SNRPCP18-201ENST00000560619 FMNL1O95466 1100 aaPredicted RBP12.99□□□□□ -0.33
SNRPCP18-201ENST00000560619 CASTP20810 708 aaKnown RBP12.99□□□□□ -0.33
SNRPCP18-201ENST00000560619 TRAF1Q13077 416 aa12.99□□□□□ -0.33
SNRPCP18-201ENST00000560619 IRF5Q13568 498 aa12.99□□□□□ -0.33
SNRPCP18-201ENST00000560619 SYDE2Q5VT97 1194 aa12.99□□□□□ -0.33
SNRPCP18-201ENST00000560619 CCAR1Q8IX12 1150 aaKnown RBP12.99□□□□□ -0.33
SNRPCP18-201ENST00000560619 ZNF654Q8IZM8 581 aa12.99□□□□□ -0.33
SNRPCP18-201ENST00000560619 CHST13Q8NET6 341 aa12.99□□□□□ -0.33
SNRPCP18-201ENST00000560619 SOCS4Q8WXH5 440 aa12.99□□□□□ -0.33
SNRPCP18-201ENST00000560619 KIFC2Q96AC6 838 aa12.99□□□□□ -0.33
SNRPCP18-201ENST00000560619 TRIM47Q96LD4 638 aa12.99□□□□□ -0.33
SNRPCP18-201ENST00000560619 PAGR1Q9BTK6 254 aa12.99□□□□□ -0.33
SNRPCP18-201ENST00000560619 MOV10L1Q9BXT6 1211 aaKnown RBP12.99□□□□□ -0.33
SNRPCP18-201ENST00000560619 SRRDQ9UH36 339 aa12.99□□□□□ -0.33
SNRPCP18-201ENST00000560619 FBXO40Q9UH90 709 aa12.99□□□□□ -0.33
SNRPCP18-201ENST00000560619 MAD2L2Q9UI95 211 aa12.99□□□□□ -0.33
SNRPCP18-201ENST00000560619 CTDP1Q9Y5B0 961 aaPredicted RBP12.99□□□□□ -0.33
SNRPCP18-201ENST00000560619 SLC12A7Q9Y666 1083 aa12.99□□□□□ -0.33
SNRPCP18-201ENST00000560619 SLC15A5A6NIM6 579 aa12.98□□□□□ -0.33
SNRPCP18-201ENST00000560619 KLRF2D3W0D1 207 aa12.98□□□□□ -0.33
SNRPCP18-201ENST00000560619 TNPO2O14787 897 aaKnown RBP12.98□□□□□ -0.33
SNRPCP18-201ENST00000560619 ICAM1P05362 532 aa12.98□□□□□ -0.33
SNRPCP18-201ENST00000560619 XRCC5P13010 732 aaKnown RBP12.98□□□□□ -0.33
SNRPCP18-201ENST00000560619 CTGFP29279 349 aa12.98□□□□□ -0.33
SNRPCP18-201ENST00000560619 IKQ13123 557 aaPredicted RBP12.98□□□□□ -0.33
SNRPCP18-201ENST00000560619 RABEP1Q15276 862 aa12.98□□□□□ -0.33
SNRPCP18-201ENST00000560619 FBXO46Q6PJ61 603 aaPredicted RBP12.98□□□□□ -0.33
SNRPCP18-201ENST00000560619 NFXL1Q6ZNB6 911 aa12.98□□□□□ -0.33
SNRPCP18-201ENST00000560619 GPR142Q7Z601 462 aa12.98□□□□□ -0.33
SNRPCP18-201ENST00000560619 PLEKHH3Q7Z736 793 aa12.98□□□□□ -0.33
SNRPCP18-201ENST00000560619 TRMT44Q8IYL2 757 aaKnown RBP12.98□□□□□ -0.33
SNRPCP18-201ENST00000560619 CTCFLQ8NI51 663 aaPredicted RBP12.98□□□□□ -0.33
SNRPCP18-201ENST00000560619 PXYLP1Q8TE99 480 aa12.98□□□□□ -0.33
SNRPCP18-201ENST00000560619 MTMR8Q96EF0 704 aa12.98□□□□□ -0.33
SNRPCP18-201ENST00000560619 RIOX1Q9H6W3 641 aa12.98□□□□□ -0.33
SNRPCP18-201ENST00000560619 RBM28Q9NW13 759 aaKnown RBP12.98□□□□□ -0.33
SNRPCP18-201ENST00000560619 GJD2Q9UKL4 321 aa12.98□□□□□ -0.33
SNRPCP18-201ENST00000560619 PTPN22Q9Y2R2 807 aa12.98□□□□□ -0.33
SNRPCP18-201ENST00000560619 TRIM17Q9Y577 477 aa12.98□□□□□ -0.33
SNRPCP18-201ENST00000560619 NID2Q14112 1375 aa12.97□□□□□ -0.33
SNRPCP18-201ENST00000560619 ZNF536O15090 1300 aa12.97□□□□□ -0.33
SNRPCP18-201ENST00000560619 CCDC196A0A1B0GTZ2 297 aa12.97□□□□□ -0.33
SNRPCP18-201ENST00000560619 HOXC6P09630 235 aa12.97□□□□□ -0.33
SNRPCP18-201ENST00000560619 PTPREP23469 700 aa12.97□□□□□ -0.33
SNRPCP18-201ENST00000560619 FGD1P98174 961 aa12.97□□□□□ -0.33
SNRPCP18-201ENST00000560619 COL9A3Q14050 684 aaPredicted RBP12.97□□□□□ -0.33
SNRPCP18-201ENST00000560619 ANKRD1Q15327 319 aa12.97□□□□□ -0.33
SNRPCP18-201ENST00000560619 MORN1Q5T089 497 aa12.97□□□□□ -0.33
SNRPCP18-201ENST00000560619 TTBK2Q6IQ55 1244 aa12.97□□□□□ -0.33
SNRPCP18-201ENST00000560619 APOA5Q6Q788 366 aa12.97□□□□□ -0.33
SNRPCP18-201ENST00000560619 Q6ZUG5 572 aa12.97□□□□□ -0.33
SNRPCP18-201ENST00000560619 FANCBQ8NB91 859 aa12.97□□□□□ -0.33
SNRPCP18-201ENST00000560619 USP6NLQ92738 828 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms