RNA–Protein interactions for RNA: ENST00000560565.1

CCDC33-209, Transcript of coiled-coil domain containing 33, humanhuman

TSL 1 (best)

Gene CCDC33, Length 1,275 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33-209ENST00000560565 AKR1B15C9JRZ8 316 aaPredicted RBP9.67□□□□□ -0.86
CCDC33-209ENST00000560565 IDH1O75874 414 aaKnown RBP9.67□□□□□ -0.86
CCDC33-209ENST00000560565 PFKFB1P16118 471 aa9.67□□□□□ -0.86
CCDC33-209ENST00000560565 PDE6AP16499 860 aa9.67□□□□□ -0.86
CCDC33-209ENST00000560565 MAGEA9P43362 315 aa9.67□□□□□ -0.86
CCDC33-209ENST00000560565 VEGFBP49765 207 aa9.67□□□□□ -0.86
CCDC33-209ENST00000560565 FMR1Q06787 632 aaKnown RBP eCLIP9.67□□□□□ -0.86
CCDC33-209ENST00000560565 DPCR1Q3MIW9 517 aa9.67□□□□□ -0.86
CCDC33-209ENST00000560565 SLC9C2Q5TAH2 1124 aa9.67□□□□□ -0.86
CCDC33-209ENST00000560565 TRIM65Q6PJ69 517 aa9.67□□□□□ -0.86
CCDC33-209ENST00000560565 KRT26Q7Z3Y9 468 aa9.67□□□□□ -0.86
CCDC33-209ENST00000560565 ZNF589Q86UQ0 364 aaPredicted RBP9.67□□□□□ -0.86
CCDC33-209ENST00000560565 SPATS2Q86XZ4 545 aaKnown RBP9.67□□□□□ -0.86
CCDC33-209ENST00000560565 KIAA0825Q8IV33 1275 aa9.67□□□□□ -0.86
CCDC33-209ENST00000560565 ZNF579Q8NAF0 562 aaKnown RBP9.67□□□□□ -0.86
CCDC33-209ENST00000560565 CNNM3Q8NE01 707 aa9.67□□□□□ -0.86
CCDC33-209ENST00000560565 CCDC148Q8NFR7 591 aa9.67□□□□□ -0.86
CCDC33-209ENST00000560565 MTA3Q9BTC8 594 aa9.67□□□□□ -0.86
CCDC33-209ENST00000560565 DEF6Q9H4E7 631 aa9.67□□□□□ -0.86
CCDC33-209ENST00000560565 PIH1D3Q9NQM4 214 aaKnown RBP9.67□□□□□ -0.86
CCDC33-209ENST00000560565 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.67□□□□□ -0.86
CCDC33-209ENST00000560565 HDAC9Q9UKV0 1011 aa9.67□□□□□ -0.86
CCDC33-209ENST00000560565 RAB21Q9UL25 225 aa9.67□□□□□ -0.86
CCDC33-209ENST00000560565 ABT1Q9ULW3 272 aaKnown RBP9.67□□□□□ -0.86
CCDC33-209ENST00000560565 HPSEQ9Y251 543 aa9.67□□□□□ -0.86
CCDC33-209ENST00000560565 NDUFB9Q9Y6M9 179 aa9.67□□□□□ -0.86
CCDC33-209ENST00000560565 COL1A1P02452 1464 aaPredicted RBP9.66□□□□□ -0.86
CCDC33-209ENST00000560565 CNTNAP1P78357 1384 aa9.66□□□□□ -0.86
CCDC33-209ENST00000560565 STK36Q9NRP7 1315 aa9.66□□□□□ -0.86
CCDC33-209ENST00000560565 A0A1B0GVL5 298 aa9.66□□□□□ -0.86
CCDC33-209ENST00000560565 TCRBV5S4A2TA0A5A2 114 aa9.66□□□□□ -0.86
CCDC33-209ENST00000560565 E7EWF7 191 aa9.66□□□□□ -0.86
CCDC33-209ENST00000560565 MAP2K7O14733 419 aa9.66□□□□□ -0.86
CCDC33-209ENST00000560565 CELF2O95319 508 aaKnown RBP9.66□□□□□ -0.86
CCDC33-209ENST00000560565 TBC1D8O95759 1140 aa9.66□□□□□ -0.86
CCDC33-209ENST00000560565 HSPD1P10809 573 aaKnown RBP9.66□□□□□ -0.86
CCDC33-209ENST00000560565 RCAN1P53805 252 aa9.66□□□□□ -0.86
CCDC33-209ENST00000560565 IRX3P78415 501 aaPredicted RBP9.66□□□□□ -0.86
CCDC33-209ENST00000560565 SETQ01105 290 aaPredicted RBP9.66□□□□□ -0.86
CCDC33-209ENST00000560565 CKAP4Q07065 602 aaKnown RBP9.66□□□□□ -0.86
CCDC33-209ENST00000560565 NAA30Q147X3 362 aaPredicted RBP9.66□□□□□ -0.86
CCDC33-209ENST00000560565 NCAPHQ15003 741 aa9.66□□□□□ -0.86
CCDC33-209ENST00000560565 PPP2R5BQ15173 497 aa9.66□□□□□ -0.86
CCDC33-209ENST00000560565 ALX1Q15699 326 aa9.66□□□□□ -0.86
CCDC33-209ENST00000560565 LONRF2Q1L5Z9 754 aa9.66□□□□□ -0.86
CCDC33-209ENST00000560565 DEFB115Q30KQ5 88 aa9.66□□□□□ -0.86
CCDC33-209ENST00000560565 CST9Q5W186 159 aa9.66□□□□□ -0.86
CCDC33-209ENST00000560565 PI16Q6UXB8 463 aa9.66□□□□□ -0.86
CCDC33-209ENST00000560565 SRLQ86TD4 932 aa9.66□□□□□ -0.86
CCDC33-209ENST00000560565 CERS3Q8IU89 383 aa9.66□□□□□ -0.86
CCDC33-209ENST00000560565 SULF1Q8IWU6 871 aa9.66□□□□□ -0.86
CCDC33-209ENST00000560565 REXO1L1PQ8IX06 675 aa9.66□□□□□ -0.86
CCDC33-209ENST00000560565 EFCAB13Q8IY85 973 aa9.66□□□□□ -0.86
CCDC33-209ENST00000560565 MSANTD4Q8NCY6 345 aa9.66□□□□□ -0.86
CCDC33-209ENST00000560565 TBC1D22AQ8WUA7 517 aa9.66□□□□□ -0.86
CCDC33-209ENST00000560565 OSBP2Q969R2 916 aa9.66□□□□□ -0.86
CCDC33-209ENST00000560565 IQCDQ96DY2 449 aa9.66□□□□□ -0.86
CCDC33-209ENST00000560565 LRP2BPQ9P2M1 347 aa9.66□□□□□ -0.86
CCDC33-209ENST00000560565 CDC23Q9UJX2 597 aa9.66□□□□□ -0.86
CCDC33-209ENST00000560565 SUGT1Q9Y2Z0 365 aa9.66□□□□□ -0.86
CCDC33-209ENST00000560565 MYH6P13533 1939 aa9.66□□□□□ -0.86
CCDC33-209ENST00000560565 ITIH6Q6UXX5 1313 aa9.65□□□□□ -0.86
CCDC33-209ENST00000560565 FAM205AQ6ZU69 1335 aa9.65□□□□□ -0.86
CCDC33-209ENST00000560565 ZNF532Q9HCE3 1301 aa9.65□□□□□ -0.86
CCDC33-209ENST00000560565 CCDC196A0A1B0GTZ2 297 aa9.65□□□□□ -0.86
CCDC33-209ENST00000560565 CTAGE15A4D2H0 777 aa9.65□□□□□ -0.86
CCDC33-209ENST00000560565 MYO1CO00159 1063 aa9.65□□□□□ -0.86
CCDC33-209ENST00000560565 POLR3GO15318 223 aaPredicted RBP9.65□□□□□ -0.86
CCDC33-209ENST00000560565 GPAA1O43292 621 aa9.65□□□□□ -0.86
CCDC33-209ENST00000560565 CLSTN1O94985 981 aa9.65□□□□□ -0.86
CCDC33-209ENST00000560565 CTAGE8P0CG41 777 aa9.65□□□□□ -0.86
CCDC33-209ENST00000560565 CAPN2P17655 700 aa9.65□□□□□ -0.86
CCDC33-209ENST00000560565 XBP1P17861 261 aa9.65□□□□□ -0.86
CCDC33-209ENST00000560565 LMAN1P49257 510 aa9.65□□□□□ -0.86
CCDC33-209ENST00000560565 FKBP1AP62942 108 aaKnown RBP9.65□□□□□ -0.86
CCDC33-209ENST00000560565 GSTO1P78417 241 aa9.65□□□□□ -0.86
CCDC33-209ENST00000560565 APOBRQ0VD83 1088 aa9.65□□□□□ -0.86
CCDC33-209ENST00000560565 TBX2Q13207 712 aaPredicted RBP9.65□□□□□ -0.86
CCDC33-209ENST00000560565 ARID5BQ14865 1188 aa9.65□□□□□ -0.86
CCDC33-209ENST00000560565 NBPF9Q3BBW0 867 aa9.65□□□□□ -0.86
CCDC33-209ENST00000560565 ANGEL2Q5VTE6 544 aaKnown RBP9.65□□□□□ -0.86
CCDC33-209ENST00000560565 RESP18Q5W5W9 173 aa9.65□□□□□ -0.86
CCDC33-209ENST00000560565 GBP6Q6ZN66 633 aa9.65□□□□□ -0.86
CCDC33-209ENST00000560565 CTAGE6Q86UF2 777 aa9.65□□□□□ -0.86
CCDC33-209ENST00000560565 TMTC1Q8IUR5 882 aa9.65□□□□□ -0.86
CCDC33-209ENST00000560565 CTAGE4Q8IX94 777 aa9.65□□□□□ -0.86
CCDC33-209ENST00000560565 KRI1Q8N9T8 703 aaKnown RBP9.65□□□□□ -0.86
CCDC33-209ENST00000560565 CCDC12Q8WUD4 166 aaPredicted RBP9.65□□□□□ -0.86
CCDC33-209ENST00000560565 TMEM87BQ96K49 555 aa9.65□□□□□ -0.86
CCDC33-209ENST00000560565 PARD6BQ9BYG5 372 aa9.65□□□□□ -0.86
CCDC33-209ENST00000560565 ZNF408Q9H9D4 720 aa9.65□□□□□ -0.86
CCDC33-209ENST00000560565 ZNHIT6Q9NWK9 470 aaKnown RBP9.65□□□□□ -0.86
CCDC33-209ENST00000560565 GGA3Q9NZ52 723 aa9.65□□□□□ -0.86
CCDC33-209ENST00000560565 RAI14Q9P0K7 980 aa9.65□□□□□ -0.86
CCDC33-209ENST00000560565 ADAM21Q9UKJ8 722 aa9.65□□□□□ -0.86
CCDC33-209ENST00000560565 JAG2Q9Y219 1238 aa9.65□□□□□ -0.86
CCDC33-209ENST00000560565 ASTN2O75129 1339 aaPredicted RBP9.64□□□□□ -0.87
CCDC33-209ENST00000560565 VWA3AA6NCI4 1184 aa9.64□□□□□ -0.87
CCDC33-209ENST00000560565 RASSF10A6NK89 507 aa9.64□□□□□ -0.87
CCDC33-209ENST00000560565 GOLGA8BA8MQT2 603 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms