RNA–Protein interactions for RNA: ENST00000560492.1

CDC42BPB-207, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 2

Gene CDC42BPB, Length 646 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-207ENST00000560492 CDK8P49336 464 aa12.62□□□□□ -0.39
CDC42BPB-207ENST00000560492 FAM83BQ5T0W9 1011 aa12.62□□□□□ -0.39
CDC42BPB-207ENST00000560492 RIOX2Q8IUF8 465 aa12.62□□□□□ -0.39
CDC42BPB-207ENST00000560492 STK11IPQ8N1F8 1099 aa12.62□□□□□ -0.39
CDC42BPB-207ENST00000560492 RHPN1Q8TCX5 695 aa12.62□□□□□ -0.39
CDC42BPB-207ENST00000560492 NUP133Q8WUM0 1156 aa12.62□□□□□ -0.39
CDC42BPB-207ENST00000560492 DDX11Q96FC9 970 aa12.62□□□□□ -0.39
CDC42BPB-207ENST00000560492 CCDC17Q96LX7 622 aa12.62□□□□□ -0.39
CDC42BPB-207ENST00000560492 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.62□□□□□ -0.39
CDC42BPB-207ENST00000560492 ATP8A2Q9NTI2 1148 aa12.62□□□□□ -0.39
CDC42BPB-207ENST00000560492 NRBP1Q9UHY1 535 aa12.62□□□□□ -0.39
CDC42BPB-207ENST00000560492 VCANP13611 3396 aa12.61□□□□□ -0.39
CDC42BPB-207ENST00000560492 TMEM265A0A087WTH1 108 aa12.61□□□□□ -0.39
CDC42BPB-207ENST00000560492 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.61□□□□□ -0.39
CDC42BPB-207ENST00000560492 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.61□□□□□ -0.39
CDC42BPB-207ENST00000560492 COPB2P35606 906 aa12.61□□□□□ -0.39
CDC42BPB-207ENST00000560492 EPHB4P54760 987 aa12.61□□□□□ -0.39
CDC42BPB-207ENST00000560492 C1orf53Q5VUE5 145 aa12.61□□□□□ -0.39
CDC42BPB-207ENST00000560492 KIF1BPQ96EK5 621 aa12.61□□□□□ -0.39
CDC42BPB-207ENST00000560492 GAS2L1Q99501 681 aaPredicted RBP12.61□□□□□ -0.39
CDC42BPB-207ENST00000560492 PRDM6Q9NQX0 595 aa12.61□□□□□ -0.39
CDC42BPB-207ENST00000560492 PAG1Q9NWQ8 432 aa12.61□□□□□ -0.39
CDC42BPB-207ENST00000560492 ISY1Q9ULR0 285 aaKnown RBP12.61□□□□□ -0.39
CDC42BPB-207ENST00000560492 SYNRGQ9UMZ2 1314 aa12.61□□□□□ -0.39
CDC42BPB-207ENST00000560492 TCRBV5S4A2TA0A5A2 114 aa12.6□□□□□ -0.39
CDC42BPB-207ENST00000560492 USP17L12C9JPN9 530 aa12.6□□□□□ -0.39
CDC42BPB-207ENST00000560492 USP17L21D6R901 530 aa12.6□□□□□ -0.39
CDC42BPB-207ENST00000560492 VWA5AO00534 786 aa12.6□□□□□ -0.39
CDC42BPB-207ENST00000560492 KIAA0355O15063 1070 aa12.6□□□□□ -0.39
CDC42BPB-207ENST00000560492 C6orf222P0C671 652 aaPredicted RBP12.6□□□□□ -0.39
CDC42BPB-207ENST00000560492 ACLYP53396 1101 aa12.6□□□□□ -0.39
CDC42BPB-207ENST00000560492 HNRNPUQ00839 825 aaKnown RBP eCLIP12.6□□□□□ -0.39
CDC42BPB-207ENST00000560492 GRIN2CQ14957 1233 aa12.6□□□□□ -0.39
CDC42BPB-207ENST00000560492 ZNF792Q3KQV3 632 aa12.6□□□□□ -0.39
CDC42BPB-207ENST00000560492 SLFNL1Q499Z3 407 aa12.6□□□□□ -0.39
CDC42BPB-207ENST00000560492 SNRNP48Q6IEG0 339 aaKnown RBP12.6□□□□□ -0.39
CDC42BPB-207ENST00000560492 CCDC174Q6PII3 467 aa12.6□□□□□ -0.39
CDC42BPB-207ENST00000560492 CPXCR1Q8N123 301 aa12.6□□□□□ -0.39
CDC42BPB-207ENST00000560492 PANK1Q8TE04 598 aa12.6□□□□□ -0.39
CDC42BPB-207ENST00000560492 TIFAQ96CG3 184 aa12.6□□□□□ -0.39
CDC42BPB-207ENST00000560492 BOLA2Q9H3K6 86 aa12.6□□□□□ -0.39
CDC42BPB-207ENST00000560492 KANSL2Q9H9L4 492 aa12.6□□□□□ -0.39
CDC42BPB-207ENST00000560492 SPC25Q9HBM1 224 aa12.6□□□□□ -0.39
CDC42BPB-207ENST00000560492 FAM184BQ9ULE4 1060 aa12.6□□□□□ -0.39
CDC42BPB-207ENST00000560492 PPP1R9AQ9ULJ8 1098 aa12.6□□□□□ -0.39
CDC42BPB-207ENST00000560492 DIS3Q9Y2L1 958 aaKnown RBP12.6□□□□□ -0.39
CDC42BPB-207ENST00000560492 SLC4A4Q9Y6R1 1079 aa12.6□□□□□ -0.39
CDC42BPB-207ENST00000560492 MYO9BQ13459 2157 aa12.6□□□□□ -0.39
CDC42BPB-207ENST00000560492 CDH23Q9H251 3354 aa12.6□□□□□ -0.39
CDC42BPB-207ENST00000560492 GBF1Q92538 1859 aa12.59□□□□□ -0.39
CDC42BPB-207ENST00000560492 HMMRO75330 724 aa12.59□□□□□ -0.39
CDC42BPB-207ENST00000560492 ADD2P35612 726 aa12.59□□□□□ -0.39
CDC42BPB-207ENST00000560492 FAAP100Q0VG06 881 aa12.59□□□□□ -0.39
CDC42BPB-207ENST00000560492 PPIGQ13427 754 aaKnown RBP eCLIP12.59□□□□□ -0.392e-12■■□□□ 12.4
CDC42BPB-207ENST00000560492 KCNA10Q16322 511 aa12.59□□□□□ -0.39
CDC42BPB-207ENST00000560492 TJAP1Q5JTD0 557 aa12.59□□□□□ -0.39
CDC42BPB-207ENST00000560492 C12orf60Q5U649 245 aa12.59□□□□□ -0.39
CDC42BPB-207ENST00000560492 C16orf86Q6ZW13 317 aa12.59□□□□□ -0.39
CDC42BPB-207ENST00000560492 SIAH1Q8IUQ4 282 aa12.59□□□□□ -0.39
CDC42BPB-207ENST00000560492 IL27Q8NEV9 243 aa12.59□□□□□ -0.39
CDC42BPB-207ENST00000560492 GLT1D1Q96MS3 346 aa12.59□□□□□ -0.39
CDC42BPB-207ENST00000560492 NUP88Q99567 741 aaPredicted RBP12.59□□□□□ -0.39
CDC42BPB-207ENST00000560492 SLF1Q9BQI6 1058 aa12.59□□□□□ -0.39
CDC42BPB-207ENST00000560492 TSEN34Q9BSV6 310 aaKnown RBP12.59□□□□□ -0.39
CDC42BPB-207ENST00000560492 PPP1R12CQ9BZL4 782 aa12.59□□□□□ -0.39
CDC42BPB-207ENST00000560492 ZNF576Q9H609 170 aa12.59□□□□□ -0.39
CDC42BPB-207ENST00000560492 ZBTB47Q9UFB7 747 aaPredicted RBP12.59□□□□□ -0.39
CDC42BPB-207ENST00000560492 MROH7Q68CQ1 1323 aa12.59□□□□□ -0.39
CDC42BPB-207ENST00000560492 MOXD2PA6NHM9 499 aa12.58□□□□□ -0.4
CDC42BPB-207ENST00000560492 SMIM22K7EJ46 135 aa12.58□□□□□ -0.4
CDC42BPB-207ENST00000560492 ZNF865P0CJ78 1059 aaPredicted RBP12.58□□□□□ -0.4
CDC42BPB-207ENST00000560492 NOL8Q76FK4 1167 aaKnown RBP12.58□□□□□ -0.4
CDC42BPB-207ENST00000560492 USP38Q8NB14 1042 aa12.58□□□□□ -0.4
CDC42BPB-207ENST00000560492 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.58□□□□□ -0.4
CDC42BPB-207ENST00000560492 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.58□□□□□ -0.4
CDC42BPB-207ENST00000560492 TEX13BQ9BXU2 312 aa12.58□□□□□ -0.4
CDC42BPB-207ENST00000560492 MKNK2Q9HBH9 465 aa12.58□□□□□ -0.4
CDC42BPB-207ENST00000560492 ZNF214Q9UL59 606 aaPredicted RBP12.58□□□□□ -0.4
CDC42BPB-207ENST00000560492 ROBO3Q96MS0 1386 aa12.57□□□□□ -0.4
CDC42BPB-207ENST00000560492 TLR3O15455 904 aaKnown RBP12.57□□□□□ -0.4
CDC42BPB-207ENST00000560492 ZBED4O75132 1171 aa12.57□□□□□ -0.4
CDC42BPB-207ENST00000560492 ADAMTS4O75173 837 aa12.57□□□□□ -0.4
CDC42BPB-207ENST00000560492 TIMP1P01033 207 aa12.57□□□□□ -0.4
CDC42BPB-207ENST00000560492 IGFBP4P22692 258 aa12.57□□□□□ -0.4
CDC42BPB-207ENST00000560492 TIE1P35590 1138 aa12.57□□□□□ -0.4
CDC42BPB-207ENST00000560492 ZSCAN25Q6NSZ9 544 aa12.57□□□□□ -0.4
CDC42BPB-207ENST00000560492 ANKRD35Q8N283 1001 aa12.57□□□□□ -0.4
CDC42BPB-207ENST00000560492 TMEM199Q8N511 208 aa12.57□□□□□ -0.4
CDC42BPB-207ENST00000560492 PCSK9Q8NBP7 692 aaKnown RBP12.57□□□□□ -0.4
CDC42BPB-207ENST00000560492 KIFC2Q96AC6 838 aa12.57□□□□□ -0.4
CDC42BPB-207ENST00000560492 PRDM12Q9H4Q4 367 aa12.57□□□□□ -0.4
CDC42BPB-207ENST00000560492 MYADML2A6NDP7 307 aa12.56□□□□□ -0.4
CDC42BPB-207ENST00000560492 GRXCR1A8MXD5 290 aa12.56□□□□□ -0.4
CDC42BPB-207ENST00000560492 MINDY4BA8MYZ0 360 aa12.56□□□□□ -0.4
CDC42BPB-207ENST00000560492 TNFRSF10AO00220 468 aa12.56□□□□□ -0.4
CDC42BPB-207ENST00000560492 DUSP11O75319 330 aaKnown RBP12.56□□□□□ -0.4
CDC42BPB-207ENST00000560492 ASGR1P07306 291 aa12.56□□□□□ -0.4
CDC42BPB-207ENST00000560492 ACRP10323 421 aa12.56□□□□□ -0.4
CDC42BPB-207ENST00000560492 CCDC85BQ15834 202 aaPredicted RBP12.56□□□□□ -0.4
CDC42BPB-207ENST00000560492 GNASQ5JWF2 1037 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms