RNA–Protein interactions for RNA: ENST00000560491.2

LYSMD2-204, Transcript of LysM domain containing 2, humanhuman

TSL 3 BASIC

Gene LYSMD2, Length 1,026 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2-204ENST00000560491 EFCC1Q9HA90 598 aa18.15■□□□□ 0.5
LYSMD2-204ENST00000560491 WDR19Q8NEZ3 1342 aa18.15■□□□□ 0.5
LYSMD2-204ENST00000560491 PLXNB2O15031 1838 aa18.14■□□□□ 0.5
LYSMD2-204ENST00000560491 EIF5BO60841 1220 aaKnown RBP18.14■□□□□ 0.49
LYSMD2-204ENST00000560491 FMNL1O95466 1100 aaPredicted RBP18.14■□□□□ 0.49
LYSMD2-204ENST00000560491 HMGB1P09429 215 aaKnown RBP18.14■□□□□ 0.49
LYSMD2-204ENST00000560491 CASTP20810 708 aaKnown RBP18.14■□□□□ 0.49
LYSMD2-204ENST00000560491 SNAP25P60880 206 aa18.14■□□□□ 0.49
LYSMD2-204ENST00000560491 NFXL1Q6ZNB6 911 aa18.14■□□□□ 0.49
LYSMD2-204ENST00000560491 CHURC1Q8WUH1 139 aa18.14■□□□□ 0.49
LYSMD2-204ENST00000560491 MYL10Q9BUA6 226 aa18.14■□□□□ 0.49
LYSMD2-204ENST00000560491 SPATC1LQ9H0A9 340 aa18.14■□□□□ 0.49
LYSMD2-204ENST00000560491 PRR12Q9ULL5 1215 aa18.14■□□□□ 0.49
LYSMD2-204ENST00000560491 TNPO2O14787 897 aaKnown RBP18.13■□□□□ 0.49
LYSMD2-204ENST00000560491 PLA2G6O60733 806 aa18.13■□□□□ 0.49
LYSMD2-204ENST00000560491 PARP1P09874 1014 aaKnown RBP18.13■□□□□ 0.49
LYSMD2-204ENST00000560491 RPS6KB1P23443 525 aa18.13■□□□□ 0.49
LYSMD2-204ENST00000560491 PSMA5P28066 241 aa18.13■□□□□ 0.49
LYSMD2-204ENST00000560491 SYDE2Q5VT97 1194 aa18.13■□□□□ 0.49
LYSMD2-204ENST00000560491 CATIPQ7Z7H3 387 aa18.13■□□□□ 0.49
LYSMD2-204ENST00000560491 ZNF654Q8IZM8 581 aa18.13■□□□□ 0.49
LYSMD2-204ENST00000560491 MOV10L1Q9BXT6 1211 aaKnown RBP18.13■□□□□ 0.49
LYSMD2-204ENST00000560491 SLC38A10Q9HBR0 1119 aa18.13■□□□□ 0.49
LYSMD2-204ENST00000560491 ZNF214Q9UL59 606 aaPredicted RBP18.13■□□□□ 0.49
LYSMD2-204ENST00000560491 CCDC69A6NI79 296 aa18.12■□□□□ 0.49
LYSMD2-204ENST00000560491 ZBED4O75132 1171 aa18.12■□□□□ 0.49
LYSMD2-204ENST00000560491 LIFRP42702 1097 aa18.12■□□□□ 0.49
LYSMD2-204ENST00000560491 CCNA1P78396 465 aa18.12■□□□□ 0.49
LYSMD2-204ENST00000560491 TROAPQ12815 778 aa18.12■□□□□ 0.49
LYSMD2-204ENST00000560491 GRM4Q14833 912 aa18.12■□□□□ 0.49
LYSMD2-204ENST00000560491 ASPRV1Q53RT3 343 aa18.12■□□□□ 0.49
LYSMD2-204ENST00000560491 GPATCH4Q5T3I0 446 aaKnown RBP18.12■□□□□ 0.49
LYSMD2-204ENST00000560491 WDR78Q5VTH9 848 aa18.12■□□□□ 0.49
LYSMD2-204ENST00000560491 BTNL9Q6UXG8 535 aa18.12■□□□□ 0.49
LYSMD2-204ENST00000560491 RAB11FIP4Q86YS3 637 aa18.12■□□□□ 0.49
LYSMD2-204ENST00000560491 CCAR1Q8IX12 1150 aaKnown RBP18.12■□□□□ 0.49
LYSMD2-204ENST00000560491 CPXCR1Q8N123 301 aa18.12■□□□□ 0.49
LYSMD2-204ENST00000560491 STAG2Q8N3U4 1231 aa18.12■□□□□ 0.49
LYSMD2-204ENST00000560491 NUP133Q8WUM0 1156 aa18.12■□□□□ 0.49
LYSMD2-204ENST00000560491 UBA5Q9GZZ9 404 aa18.12■□□□□ 0.49
LYSMD2-204ENST00000560491 RAVER2Q9HCJ3 691 aaKnown RBP18.12■□□□□ 0.49
LYSMD2-204ENST00000560491 RXRAP19793 462 aa18.11■□□□□ 0.49
LYSMD2-204ENST00000560491 PRKCZQ05513 592 aa18.11■□□□□ 0.49
LYSMD2-204ENST00000560491 CCDC174Q6PII3 467 aa18.11■□□□□ 0.49
LYSMD2-204ENST00000560491 Q6ZUG5 572 aa18.11■□□□□ 0.49
LYSMD2-204ENST00000560491 GPR142Q7Z601 462 aa18.11■□□□□ 0.49
LYSMD2-204ENST00000560491 SGMS1Q86VZ5 419 aa18.11■□□□□ 0.49
LYSMD2-204ENST00000560491 UPF3BQ9BZI7 483 aaKnown RBP18.11■□□□□ 0.49
LYSMD2-204ENST00000560491 MCOLN1Q9GZU1 580 aa18.11■□□□□ 0.49
LYSMD2-204ENST00000560491 ZSWIM6Q9HCJ5 1215 aa18.11■□□□□ 0.49
LYSMD2-204ENST00000560491 MAD2L2Q9UI95 211 aa18.11■□□□□ 0.49
LYSMD2-204ENST00000560491 GABRQQ9UN88 632 aa18.11■□□□□ 0.49
LYSMD2-204ENST00000560491 CTDP1Q9Y5B0 961 aaPredicted RBP18.11■□□□□ 0.49
LYSMD2-204ENST00000560491 MYH6P13533 1939 aa18.11■□□□□ 0.49
LYSMD2-204ENST00000560491 SMCHD1A6NHR9 2005 aa18.1■□□□□ 0.49
LYSMD2-204ENST00000560491 ZNF536O15090 1300 aa18.1■□□□□ 0.49
LYSMD2-204ENST00000560491 PALM3A6NDB9 673 aaPredicted RBP18.1■□□□□ 0.49
LYSMD2-204ENST00000560491 DDAH1O94760 285 aa18.1■□□□□ 0.49
LYSMD2-204ENST00000560491 TAL1P17542 331 aaPredicted RBP18.1■□□□□ 0.49
LYSMD2-204ENST00000560491 ERCC3P19447 782 aa18.1■□□□□ 0.49
LYSMD2-204ENST00000560491 MAPK4P31152 587 aa18.1■□□□□ 0.49
LYSMD2-204ENST00000560491 STAT3P40763 770 aa18.1■□□□□ 0.49
LYSMD2-204ENST00000560491 SLC4A3P48751 1232 aa18.1■□□□□ 0.49
LYSMD2-204ENST00000560491 ANAPC15P60006 121 aa18.1■□□□□ 0.49
LYSMD2-204ENST00000560491 FGD1P98174 961 aa18.1■□□□□ 0.49
LYSMD2-204ENST00000560491 ARHGEF6Q15052 776 aa18.1■□□□□ 0.49
LYSMD2-204ENST00000560491 SNRNP48Q6IEG0 339 aaKnown RBP18.1■□□□□ 0.49
LYSMD2-204ENST00000560491 RUFY3Q7L099 469 aa18.1■□□□□ 0.49
LYSMD2-204ENST00000560491 NCAPG2Q86XI2 1143 aa18.1■□□□□ 0.49
LYSMD2-204ENST00000560491 CCDC144CPQ8IYA2 1237 aa18.1■□□□□ 0.49
LYSMD2-204ENST00000560491 TMTC2Q8N394 836 aa18.1■□□□□ 0.49
LYSMD2-204ENST00000560491 COA7Q96BR5 231 aa18.1■□□□□ 0.49
LYSMD2-204ENST00000560491 TEX13BQ9BXU2 312 aa18.1■□□□□ 0.49
LYSMD2-204ENST00000560491 TM6SF1Q9BZW5 370 aa18.1■□□□□ 0.49
LYSMD2-204ENST00000560491 RANBP17Q9H2T7 1088 aaKnown RBP18.1■□□□□ 0.49
LYSMD2-204ENST00000560491 CWC22Q9HCG8 908 aaKnown RBP18.1■□□□□ 0.49
LYSMD2-204ENST00000560491 SRRDQ9UH36 339 aa18.1■□□□□ 0.49
LYSMD2-204ENST00000560491 BRPF3Q9ULD4 1205 aa18.1■□□□□ 0.49
LYSMD2-204ENST00000560491 RIPK3Q9Y572 518 aa18.1■□□□□ 0.49
LYSMD2-204ENST00000560491 HTTP42858 3142 aa18.09■□□□□ 0.49
LYSMD2-204ENST00000560491 GNRH1P01148 92 aa18.09■□□□□ 0.49
LYSMD2-204ENST00000560491 PLEKHH3Q7Z736 793 aa18.09■□□□□ 0.49
LYSMD2-204ENST00000560491 MICU3Q86XE3 530 aa18.09■□□□□ 0.49
LYSMD2-204ENST00000560491 RIOX2Q8IUF8 465 aa18.09■□□□□ 0.49
LYSMD2-204ENST00000560491 AGBL1Q96MI9 1066 aa18.09■□□□□ 0.49
LYSMD2-204ENST00000560491 PTPN22Q9Y2R2 807 aa18.09■□□□□ 0.49
LYSMD2-204ENST00000560491 SLC12A7Q9Y666 1083 aa18.09■□□□□ 0.49
LYSMD2-204ENST00000560491 CYP46A1Q9Y6A2 500 aa18.09■□□□□ 0.49
LYSMD2-204ENST00000560491 PTCH2Q9Y6C5 1203 aa18.09■□□□□ 0.49
LYSMD2-204ENST00000560491 ZNFX1Q9P2E3 1918 aaKnown RBP18.08■□□□□ 0.49
LYSMD2-204ENST00000560491 KLF18A0A0U1RQI7 1052 aa18.08■□□□□ 0.48
LYSMD2-204ENST00000560491 KLRF2D3W0D1 207 aa18.08■□□□□ 0.48
LYSMD2-204ENST00000560491 ATP2A1O14983 1001 aa18.08■□□□□ 0.48
LYSMD2-204ENST00000560491 FDX1P10109 184 aa18.08■□□□□ 0.48
LYSMD2-204ENST00000560491 APOBRQ0VD83 1088 aa18.08■□□□□ 0.48
LYSMD2-204ENST00000560491 SLC35G1Q2M3R5 365 aa18.08■□□□□ 0.48
LYSMD2-204ENST00000560491 APOA5Q6Q788 366 aa18.08■□□□□ 0.48
LYSMD2-204ENST00000560491 ADGRF4Q8IZF3 695 aa18.08■□□□□ 0.48
LYSMD2-204ENST00000560491 SHCBP1Q8NEM2 672 aa18.08■□□□□ 0.48
LYSMD2-204ENST00000560491 BRF1Q92994 677 aa18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms