RNA–Protein interactions for RNA: ENST00000560463.5

TRAF3-209, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 701 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-209ENST00000560463 FOSBP53539 338 aa9.91□□□□□ -0.82
TRAF3-209ENST00000560463 MAP3K9P80192 1104 aa9.91□□□□□ -0.82
TRAF3-209ENST00000560463 PRAMEF18Q5VWM3 479 aa9.91□□□□□ -0.82
TRAF3-209ENST00000560463 PPP1R18Q6NYC8 613 aa9.91□□□□□ -0.82
TRAF3-209ENST00000560463 RASGRP2Q7LDG7 609 aa9.91□□□□□ -0.82
TRAF3-209ENST00000560463 FAM160B2Q86V87 743 aa9.91□□□□□ -0.82
TRAF3-209ENST00000560463 NOSTRINQ8IVI9 506 aa9.91□□□□□ -0.82
TRAF3-209ENST00000560463 DIS3L2Q8IYB7 885 aaKnown RBP9.91□□□□□ -0.82
TRAF3-209ENST00000560463 ANKRD13AQ8IZ07 590 aa9.91□□□□□ -0.82
TRAF3-209ENST00000560463 ZNF280CQ8ND82 737 aa9.91□□□□□ -0.82
TRAF3-209ENST00000560463 ACER1Q8TDN7 264 aa9.91□□□□□ -0.82
TRAF3-209ENST00000560463 ZKSCAN4Q969J2 545 aaPredicted RBP9.91□□□□□ -0.82
TRAF3-209ENST00000560463 PIGSQ96S52 555 aa9.91□□□□□ -0.82
TRAF3-209ENST00000560463 FEZ1Q99689 392 aa9.91□□□□□ -0.82
TRAF3-209ENST00000560463 UBA5Q9GZZ9 404 aa9.91□□□□□ -0.82
TRAF3-209ENST00000560463 GJB4Q9NTQ9 266 aa9.91□□□□□ -0.82
TRAF3-209ENST00000560463 VPS54Q9P1Q0 977 aa9.91□□□□□ -0.82
TRAF3-209ENST00000560463 FEM1BQ9UK73 627 aa9.91□□□□□ -0.82
TRAF3-209ENST00000560463 CLEC11AQ9Y240 323 aa9.91□□□□□ -0.82
TRAF3-209ENST00000560463 CSADQ9Y600 493 aa9.91□□□□□ -0.82
TRAF3-209ENST00000560463 LOXHD1Q8IVV2 1947 aa9.9□□□□□ -0.82
TRAF3-209ENST00000560463 TMEM232C9JQI7 657 aa9.9□□□□□ -0.82
TRAF3-209ENST00000560463 STXBP3O00186 592 aa9.9□□□□□ -0.82
TRAF3-209ENST00000560463 NCLP19338 710 aaKnown RBP9.9□□□□□ -0.82
TRAF3-209ENST00000560463 GNA11P29992 359 aa9.9□□□□□ -0.82
TRAF3-209ENST00000560463 NAPAP54920 295 aa9.9□□□□□ -0.82
TRAF3-209ENST00000560463 BACE1P56817 501 aa9.9□□□□□ -0.82
TRAF3-209ENST00000560463 NLRP5P59047 1200 aa9.9□□□□□ -0.82
TRAF3-209ENST00000560463 DNM1Q05193 864 aaKnown RBP9.9□□□□□ -0.82
TRAF3-209ENST00000560463 IKQ13123 557 aaPredicted RBP9.9□□□□□ -0.82
TRAF3-209ENST00000560463 SLC35G1Q2M3R5 365 aa9.9□□□□□ -0.82
TRAF3-209ENST00000560463 MYSM1Q5VVJ2 828 aa9.9□□□□□ -0.82
TRAF3-209ENST00000560463 WWC2Q6AWC2 1192 aa9.9□□□□□ -0.82
TRAF3-209ENST00000560463 TTBK2Q6IQ55 1244 aa9.9□□□□□ -0.82
TRAF3-209ENST00000560463 HEATR3Q7Z4Q2 680 aa9.9□□□□□ -0.82
TRAF3-209ENST00000560463 LDHDQ86WU2 507 aa9.9□□□□□ -0.82
TRAF3-209ENST00000560463 HOMER1Q86YM7 354 aa9.9□□□□□ -0.82
TRAF3-209ENST00000560463 TEX2Q8IWB9 1127 aa9.9□□□□□ -0.82
TRAF3-209ENST00000560463 DAGLBQ8NCG7 672 aa9.9□□□□□ -0.82
TRAF3-209ENST00000560463 RBM46Q8TBY0 533 aaKnown RBP9.9□□□□□ -0.82
TRAF3-209ENST00000560463 BICD2Q8TD16 824 aa9.9□□□□□ -0.82
TRAF3-209ENST00000560463 ZMYND12Q9H0C1 365 aa9.9□□□□□ -0.82
TRAF3-209ENST00000560463 GLT8D2Q9H1C3 349 aa9.9□□□□□ -0.82
TRAF3-209ENST00000560463 CPVLQ9H3G5 476 aa9.9□□□□□ -0.82
TRAF3-209ENST00000560463 RRAGCQ9HB90 399 aa9.9□□□□□ -0.82
TRAF3-209ENST00000560463 VAT1LQ9HCJ6 419 aa9.9□□□□□ -0.82
TRAF3-209ENST00000560463 C6orf50Q9HD87 102 aa9.9□□□□□ -0.82
TRAF3-209ENST00000560463 LMBRD1Q9NUN5 540 aa9.9□□□□□ -0.82
TRAF3-209ENST00000560463 ISY1Q9ULR0 285 aaKnown RBP9.9□□□□□ -0.82
TRAF3-209ENST00000560463 KCNJ14Q9UNX9 436 aa9.9□□□□□ -0.82
TRAF3-209ENST00000560463 CNPY2Q9Y2B0 182 aa9.9□□□□□ -0.82
TRAF3-209ENST00000560463 PLXNA1Q9UIW2 1896 aa9.89□□□□□ -0.83
TRAF3-209ENST00000560463 BTBD18B2RXH4 712 aa9.89□□□□□ -0.83
TRAF3-209ENST00000560463 KIF28PB7ZC32 967 aa9.89□□□□□ -0.83
TRAF3-209ENST00000560463 FDX1P10109 184 aa9.89□□□□□ -0.83
TRAF3-209ENST00000560463 FOXD4L6Q3SYB3 417 aaPredicted RBP9.89□□□□□ -0.83
TRAF3-209ENST00000560463 RILPL1Q5EBL4 403 aa9.89□□□□□ -0.83
TRAF3-209ENST00000560463 FAM83BQ5T0W9 1011 aa9.89□□□□□ -0.83
TRAF3-209ENST00000560463 SYDE2Q5VT97 1194 aa9.89□□□□□ -0.83
TRAF3-209ENST00000560463 FOXD4L3Q6VB84 417 aaPredicted RBP9.89□□□□□ -0.83
TRAF3-209ENST00000560463 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.89□□□□□ -0.83
TRAF3-209ENST00000560463 ARMC9Q7Z3E5 817 aa9.89□□□□□ -0.83
TRAF3-209ENST00000560463 BLIDQ8IZY5 108 aa9.89□□□□□ -0.83
TRAF3-209ENST00000560463 SPICE1Q8N0Z3 855 aa9.89□□□□□ -0.83
TRAF3-209ENST00000560463 PIBF1Q8WXW3 757 aa9.89□□□□□ -0.83
TRAF3-209ENST00000560463 SPATA32Q96LK8 384 aa9.89□□□□□ -0.83
TRAF3-209ENST00000560463 C12orf42Q96LP6 360 aa9.89□□□□□ -0.83
TRAF3-209ENST00000560463 GLIS2Q9BZE0 524 aaPredicted RBP9.89□□□□□ -0.83
TRAF3-209ENST00000560463 POLR3EQ9NVU0 708 aa9.89□□□□□ -0.83
TRAF3-209ENST00000560463 RTEL1Q9NZ71 1219 aa9.89□□□□□ -0.83
TRAF3-209ENST00000560463 RCOR1Q9UKL0 485 aa9.89□□□□□ -0.83
TRAF3-209ENST00000560463 PCDHA4Q9UN74 947 aa9.89□□□□□ -0.83
TRAF3-209ENST00000560463 AFG3L2Q9Y4W6 797 aa9.89□□□□□ -0.83
TRAF3-209ENST00000560463 ZHX2Q9Y6X8 837 aa9.89□□□□□ -0.83
TRAF3-209ENST00000560463 SMCO2A6NFE2 343 aa9.88□□□□□ -0.83
TRAF3-209ENST00000560463 PRPF40AO75400 957 aaKnown RBP9.88□□□□□ -0.83
TRAF3-209ENST00000560463 YEATS4O95619 227 aa9.88□□□□□ -0.83
TRAF3-209ENST00000560463 MBD3O95983 291 aa9.88□□□□□ -0.83
TRAF3-209ENST00000560463 SLC16A2P36021 539 aa9.88□□□□□ -0.83
TRAF3-209ENST00000560463 FKBP1BP68106 108 aa9.88□□□□□ -0.83
TRAF3-209ENST00000560463 PPATQ06203 517 aa9.88□□□□□ -0.83
TRAF3-209ENST00000560463 SPP2Q13103 211 aa9.88□□□□□ -0.83
TRAF3-209ENST00000560463 MTMR2Q13614 643 aa9.88□□□□□ -0.83
TRAF3-209ENST00000560463 VGLL4Q14135 290 aa9.88□□□□□ -0.83
TRAF3-209ENST00000560463 NPY5RQ15761 445 aa9.88□□□□□ -0.83
TRAF3-209ENST00000560463 ZYXQ15942 572 aaKnown RBP9.88□□□□□ -0.83
TRAF3-209ENST00000560463 CDC37Q16543 378 aaPredicted RBP9.88□□□□□ -0.83
TRAF3-209ENST00000560463 QRICH1Q2TAL8 776 aa9.88□□□□□ -0.83
TRAF3-209ENST00000560463 SH3D19Q5HYK7 790 aa9.88□□□□□ -0.83
TRAF3-209ENST00000560463 KIAA1755Q5JYT7 1200 aa9.88□□□□□ -0.83
TRAF3-209ENST00000560463 MCTP2Q6DN12 878 aa9.88□□□□□ -0.83
TRAF3-209ENST00000560463 FAM173BQ6P4H8 233 aa9.88□□□□□ -0.83
TRAF3-209ENST00000560463 ERO1BQ86YB8 467 aa9.88□□□□□ -0.83
TRAF3-209ENST00000560463 PRPF38AQ8NAV1 312 aaKnown RBP9.88□□□□□ -0.83
TRAF3-209ENST00000560463 GPKOWQ92917 476 aaPredicted RBP eCLIP9.88□□□□□ -0.83
TRAF3-209ENST00000560463 SHISA4Q96DD7 197 aa9.88□□□□□ -0.83
TRAF3-209ENST00000560463 NUP88Q99567 741 aaPredicted RBP9.88□□□□□ -0.83
TRAF3-209ENST00000560463 ANP32EQ9BTT0 268 aa9.88□□□□□ -0.83
TRAF3-209ENST00000560463 AMNQ9BXJ7 453 aa9.88□□□□□ -0.83
TRAF3-209ENST00000560463 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms