RNA–Protein interactions for RNA: ENST00000560448.5

PKNOX1-209, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 5

Gene PKNOX1, Length 1,429 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-209ENST00000560448 FBXL16Q8N461 479 aa16.35■□□□□ 0.21
PKNOX1-209ENST00000560448 NKX2-3Q8TAU0 364 aa16.35■□□□□ 0.21
PKNOX1-209ENST00000560448 TRIM47Q96LD4 638 aa16.35■□□□□ 0.21
PKNOX1-209ENST00000560448 NUP88Q99567 741 aaPredicted RBP16.35■□□□□ 0.21
PKNOX1-209ENST00000560448 TEX13BQ9BXU2 312 aa16.35■□□□□ 0.21
PKNOX1-209ENST00000560448 SRRDQ9UH36 339 aa16.35■□□□□ 0.21
PKNOX1-209ENST00000560448 CNMDO75829 334 aa16.34■□□□□ 0.21
PKNOX1-209ENST00000560448 DDAH1O94760 285 aa16.34■□□□□ 0.21
PKNOX1-209ENST00000560448 ANTXR2P58335 489 aa16.34■□□□□ 0.21
PKNOX1-209ENST00000560448 RIOX2Q8IUF8 465 aa16.34■□□□□ 0.21
PKNOX1-209ENST00000560448 ABRAQ8N0Z2 381 aa16.34■□□□□ 0.21
PKNOX1-209ENST00000560448 KIFC2Q96AC6 838 aa16.34■□□□□ 0.21
PKNOX1-209ENST00000560448 TM6SF1Q9BZW5 370 aa16.34■□□□□ 0.21
PKNOX1-209ENST00000560448 FBXO28Q9NVF7 368 aa16.34■□□□□ 0.21
PKNOX1-209ENST00000560448 BTBD7Q9P203 1132 aa16.34■□□□□ 0.21
PKNOX1-209ENST00000560448 ZNF214Q9UL59 606 aaPredicted RBP16.34■□□□□ 0.21
PKNOX1-209ENST00000560448 ISY1Q9ULR0 285 aaKnown RBP16.34■□□□□ 0.21
PKNOX1-209ENST00000560448 PTPN22Q9Y2R2 807 aa16.34■□□□□ 0.21
PKNOX1-209ENST00000560448 IVNS1ABPQ9Y6Y0 642 aa16.34■□□□□ 0.21
PKNOX1-209ENST00000560448 SH2B2O14492 632 aaPredicted RBP16.33■□□□□ 0.2
PKNOX1-209ENST00000560448 PARP1P09874 1014 aaKnown RBP16.33■□□□□ 0.2
PKNOX1-209ENST00000560448 KIF5BP33176 963 aa16.33■□□□□ 0.2
PKNOX1-209ENST00000560448 STAT3P40763 770 aa16.33■□□□□ 0.2
PKNOX1-209ENST00000560448 RCAN1P53805 252 aa16.33■□□□□ 0.2
PKNOX1-209ENST00000560448 Q3C1V9 767 aa16.33■□□□□ 0.2
PKNOX1-209ENST00000560448 BLOC1S2Q6QNY1 142 aa16.33■□□□□ 0.2
PKNOX1-209ENST00000560448 POTEEQ6S8J3 1075 aa16.33■□□□□ 0.2
PKNOX1-209ENST00000560448 KCTD1Q719H9 257 aa16.33■□□□□ 0.2
PKNOX1-209ENST00000560448 SGMS1Q86VZ5 419 aa16.33■□□□□ 0.2
PKNOX1-209ENST00000560448 RASEFQ8IZ41 740 aa16.33■□□□□ 0.2
PKNOX1-209ENST00000560448 REPS2Q8NFH8 660 aa16.33■□□□□ 0.2
PKNOX1-209ENST00000560448 CWC22Q9HCG8 908 aaKnown RBP16.33■□□□□ 0.2
PKNOX1-209ENST00000560448 SNX14Q9Y5W7 946 aa16.33■□□□□ 0.2
PKNOX1-209ENST00000560448 CCDC69A6NI79 296 aa16.32■□□□□ 0.2
PKNOX1-209ENST00000560448 XRCC5P13010 732 aaKnown RBP16.32■□□□□ 0.2
PKNOX1-209ENST00000560448 EXOSC10Q01780 885 aaKnown RBP16.32■□□□□ 0.2
PKNOX1-209ENST00000560448 TMEM132BQ14DG7 1078 aa16.32■□□□□ 0.2
PKNOX1-209ENST00000560448 TKFCQ3LXA3 575 aa16.32■□□□□ 0.2
PKNOX1-209ENST00000560448 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.32■□□□□ 0.2
PKNOX1-209ENST00000560448 GPR142Q7Z601 462 aa16.32■□□□□ 0.2
PKNOX1-209ENST00000560448 PLEKHH3Q7Z736 793 aa16.32■□□□□ 0.2
PKNOX1-209ENST00000560448 TRMT44Q8IYL2 757 aaKnown RBP16.32■□□□□ 0.2
PKNOX1-209ENST00000560448 PXYLP1Q8TE99 480 aa16.32■□□□□ 0.2
PKNOX1-209ENST00000560448 NUDT12Q9BQG2 462 aa16.32■□□□□ 0.2
PKNOX1-209ENST00000560448 MOV10L1Q9BXT6 1211 aaKnown RBP16.32■□□□□ 0.2
PKNOX1-209ENST00000560448 ARHGAP39Q9C0H5 1083 aa16.32■□□□□ 0.2
PKNOX1-209ENST00000560448 MCOLN1Q9GZU1 580 aa16.32■□□□□ 0.2
PKNOX1-209ENST00000560448 MAF1Q9H063 256 aa16.32■□□□□ 0.2
PKNOX1-209ENST00000560448 LY9Q9HBG7 655 aa16.32■□□□□ 0.2
PKNOX1-209ENST00000560448 FBXO40Q9UH90 709 aa16.32■□□□□ 0.2
PKNOX1-209ENST00000560448 PRR12Q9ULL5 1215 aa16.32■□□□□ 0.2
PKNOX1-209ENST00000560448 SMARCA1P28370 1054 aa16.31■□□□□ 0.2
PKNOX1-209ENST00000560448 TROAPQ12815 778 aa16.31■□□□□ 0.2
PKNOX1-209ENST00000560448 TRAF1Q13077 416 aa16.31■□□□□ 0.2
PKNOX1-209ENST00000560448 PLS1Q14651 629 aa16.31■□□□□ 0.2
PKNOX1-209ENST00000560448 PPP2R5BQ15173 497 aa16.31■□□□□ 0.2
PKNOX1-209ENST00000560448 SYDE2Q5VT97 1194 aa16.31■□□□□ 0.2
PKNOX1-209ENST00000560448 SYNE3Q6ZMZ3 975 aa16.31■□□□□ 0.2
PKNOX1-209ENST00000560448 NBPF11Q86T75 865 aa16.31■□□□□ 0.2
PKNOX1-209ENST00000560448 CHST13Q8NET6 341 aa16.31■□□□□ 0.2
PKNOX1-209ENST00000560448 RAET1EQ8TD07 263 aa16.31■□□□□ 0.2
PKNOX1-209ENST00000560448 IL17RAQ96F46 866 aa16.31■□□□□ 0.2
PKNOX1-209ENST00000560448 JAKMIP1Q96N16 626 aaKnown RBP16.31■□□□□ 0.2
PKNOX1-209ENST00000560448 RANBP17Q9H2T7 1088 aaKnown RBP16.31■□□□□ 0.2
PKNOX1-209ENST00000560448 SLC5A4Q9NY91 659 aa16.31■□□□□ 0.2
PKNOX1-209ENST00000560448 ZNF236Q9UL36 1845 aa16.31■□□□□ 0.2
PKNOX1-209ENST00000560448 COL11A1P12107 1806 aaPredicted RBP16.3■□□□□ 0.2
PKNOX1-209ENST00000560448 SLC15A5A6NIM6 579 aa16.3■□□□□ 0.2
PKNOX1-209ENST00000560448 ERCC3P19447 782 aa16.3■□□□□ 0.2
PKNOX1-209ENST00000560448 CTGFP29279 349 aa16.3■□□□□ 0.2
PKNOX1-209ENST00000560448 GNAQP50148 359 aa16.3■□□□□ 0.2
PKNOX1-209ENST00000560448 GRM4Q14833 912 aa16.3■□□□□ 0.2
PKNOX1-209ENST00000560448 ADCK5Q3MIX3 580 aa16.3■□□□□ 0.2
PKNOX1-209ENST00000560448 NFXL1Q6ZNB6 911 aa16.3■□□□□ 0.2
PKNOX1-209ENST00000560448 CHST3Q7LGC8 479 aa16.3■□□□□ 0.2
PKNOX1-209ENST00000560448 SLAIN1Q8ND83 568 aa16.3■□□□□ 0.2
PKNOX1-209ENST00000560448 IL27Q8NEV9 243 aa16.3■□□□□ 0.2
PKNOX1-209ENST00000560448 CTCFLQ8NI51 663 aaPredicted RBP16.3■□□□□ 0.2
PKNOX1-209ENST00000560448 LZTS2Q9BRK4 669 aa16.3■□□□□ 0.2
PKNOX1-209ENST00000560448 PORCNQ9H237 461 aa16.3■□□□□ 0.2
PKNOX1-209ENST00000560448 MTMR7Q9Y216 660 aa16.3■□□□□ 0.2
PKNOX1-209ENST00000560448 SLC12A7Q9Y666 1083 aa16.3■□□□□ 0.2
PKNOX1-209ENST00000560448 FRMPD2Q68DX3 1309 aaPredicted RBP16.3■□□□□ 0.2
PKNOX1-209ENST00000560448 PALM3A6NDB9 673 aaPredicted RBP16.29■□□□□ 0.2
PKNOX1-209ENST00000560448 ICAM1P05362 532 aa16.29■□□□□ 0.2
PKNOX1-209ENST00000560448 PTPREP23469 700 aa16.29■□□□□ 0.2
PKNOX1-209ENST00000560448 RGS2P41220 211 aa16.29■□□□□ 0.2
PKNOX1-209ENST00000560448 FGD1P98174 961 aa16.29■□□□□ 0.2
PKNOX1-209ENST00000560448 GRB14Q14449 540 aa16.29■□□□□ 0.2
PKNOX1-209ENST00000560448 SAMD1Q6SPF0 538 aaPredicted RBP16.29■□□□□ 0.2
PKNOX1-209ENST00000560448 ZNF654Q8IZM8 581 aa16.29■□□□□ 0.2
PKNOX1-209ENST00000560448 TBC1D32Q96NH3 1257 aa16.29■□□□□ 0.2
PKNOX1-209ENST00000560448 HOXC6P09630 235 aa16.28■□□□□ 0.2
PKNOX1-209ENST00000560448 FCER1AP12319 257 aa16.28■□□□□ 0.2
PKNOX1-209ENST00000560448 RPS6KB1P23443 525 aa16.28■□□□□ 0.2
PKNOX1-209ENST00000560448 FLT3LGP49771 235 aa16.28■□□□□ 0.2
PKNOX1-209ENST00000560448 PRKCZQ05513 592 aa16.28■□□□□ 0.2
PKNOX1-209ENST00000560448 MORN1Q5T089 497 aa16.28■□□□□ 0.2
PKNOX1-209ENST00000560448 SNRNP48Q6IEG0 339 aaKnown RBP16.28■□□□□ 0.2
PKNOX1-209ENST00000560448 RUFY3Q7L099 469 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms