RNA–Protein interactions for RNA: ENST00000560424.1

SMAD3-215, Transcript of SMAD family member 3, humanhuman

TSL 3

Gene SMAD3, Length 775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-215ENST00000560424 ZNFX1Q9P2E3 1918 aaKnown RBP11.23□□□□□ -0.61
SMAD3-215ENST00000560424 XIRP2A4UGR9 3374 aa11.22□□□□□ -0.61
SMAD3-215ENST00000560424 A0A1W2PRG0 241 aa11.22□□□□□ -0.61
SMAD3-215ENST00000560424 SMIM22K7EJ46 135 aa11.22□□□□□ -0.61
SMAD3-215ENST00000560424 RAD21O60216 631 aa11.22□□□□□ -0.61
SMAD3-215ENST00000560424 DUSP11O75319 330 aaKnown RBP11.22□□□□□ -0.61
SMAD3-215ENST00000560424 RLBP1P12271 317 aa11.22□□□□□ -0.61
SMAD3-215ENST00000560424 SHMT1P34896 483 aa11.22□□□□□ -0.61
SMAD3-215ENST00000560424 TMEM132BQ14DG7 1078 aa11.22□□□□□ -0.61
SMAD3-215ENST00000560424 CSPP1Q1MSJ5 1256 aa11.22□□□□□ -0.61
SMAD3-215ENST00000560424 ZNF792Q3KQV3 632 aa11.22□□□□□ -0.61
SMAD3-215ENST00000560424 FAM126BQ8IXS8 530 aa11.22□□□□□ -0.61
SMAD3-215ENST00000560424 FTSJ3Q8IY81 847 aaKnown RBP11.22□□□□□ -0.61
SMAD3-215ENST00000560424 MSL3Q8N5Y2 521 aaKnown RBP11.22□□□□□ -0.61
SMAD3-215ENST00000560424 KLHDC9Q8NEP7 349 aa11.22□□□□□ -0.61
SMAD3-215ENST00000560424 HLA-CQ95604 372 aa11.22□□□□□ -0.61
SMAD3-215ENST00000560424 DDX11Q96FC9 970 aa11.22□□□□□ -0.61
SMAD3-215ENST00000560424 UIMC1Q96RL1 719 aa11.22□□□□□ -0.61
SMAD3-215ENST00000560424 HIPK3Q9H422 1215 aa11.22□□□□□ -0.61
SMAD3-215ENST00000560424 DDX19BQ9UMR2 479 aa11.22□□□□□ -0.61
SMAD3-215ENST00000560424 PCDHA11Q9Y5I1 949 aa11.22□□□□□ -0.61
SMAD3-215ENST00000560424 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.22□□□□□ -0.61
SMAD3-215ENST00000560424 LRRC37A2A6NM11 1700 aa11.21□□□□□ -0.61
SMAD3-215ENST00000560424 WDR46O15213 610 aaKnown RBP11.21□□□□□ -0.61
SMAD3-215ENST00000560424 ATP2A2P16615 1042 aaKnown RBP11.21□□□□□ -0.61
SMAD3-215ENST00000560424 CST5P28325 142 aaPredicted RBP11.21□□□□□ -0.61
SMAD3-215ENST00000560424 GUCY1A2P33402 732 aa11.21□□□□□ -0.61
SMAD3-215ENST00000560424 STAT3P40763 770 aa11.21□□□□□ -0.61
SMAD3-215ENST00000560424 ZAP70P43403 619 aa11.21□□□□□ -0.61
SMAD3-215ENST00000560424 MRE11P49959 708 aa11.21□□□□□ -0.61
SMAD3-215ENST00000560424 CDK7P50613 346 aa11.21□□□□□ -0.61
SMAD3-215ENST00000560424 PLCD1P51178 756 aa11.21□□□□□ -0.61
SMAD3-215ENST00000560424 TMEM67Q5HYA8 995 aa11.21□□□□□ -0.61
SMAD3-215ENST00000560424 GNASQ5JWF2 1037 aa11.21□□□□□ -0.61
SMAD3-215ENST00000560424 TMEM179Q6ZVK1 233 aa11.21□□□□□ -0.61
SMAD3-215ENST00000560424 RIOX2Q8IUF8 465 aa11.21□□□□□ -0.61
SMAD3-215ENST00000560424 MAGEB6Q8N7X4 407 aa11.21□□□□□ -0.61
SMAD3-215ENST00000560424 SNX27Q96L92 541 aa11.21□□□□□ -0.61
SMAD3-215ENST00000560424 MTCH2Q9Y6C9 303 aa11.21□□□□□ -0.61
SMAD3-215ENST00000560424 MYADML2A6NDP7 307 aa11.2□□□□□ -0.62
SMAD3-215ENST00000560424 TLL1O43897 1013 aa11.2□□□□□ -0.62
SMAD3-215ENST00000560424 MYOGP15173 224 aa11.2□□□□□ -0.62
SMAD3-215ENST00000560424 CCL23P55773 120 aa11.2□□□□□ -0.62
SMAD3-215ENST00000560424 ICA1Q05084 483 aa11.2□□□□□ -0.62
SMAD3-215ENST00000560424 CCSAPQ6IQ19 270 aaPredicted RBP11.2□□□□□ -0.62
SMAD3-215ENST00000560424 NOL8Q76FK4 1167 aaKnown RBP11.2□□□□□ -0.62
SMAD3-215ENST00000560424 PANK1Q8TE04 598 aa11.2□□□□□ -0.62
SMAD3-215ENST00000560424 CLUAP1Q96AJ1 413 aa11.2□□□□□ -0.62
SMAD3-215ENST00000560424 CCDC136Q96JN2 1154 aa11.2□□□□□ -0.62
SMAD3-215ENST00000560424 DBNDD2Q9BQY9 259 aa11.2□□□□□ -0.62
SMAD3-215ENST00000560424 VCPKMTQ9H867 229 aa11.2□□□□□ -0.62
SMAD3-215ENST00000560424 CERS4Q9HA82 394 aa11.2□□□□□ -0.62
SMAD3-215ENST00000560424 PIH1D3Q9NQM4 214 aaKnown RBP11.2□□□□□ -0.62
SMAD3-215ENST00000560424 MCM9Q9NXL9 1143 aa11.2□□□□□ -0.62
SMAD3-215ENST00000560424 CTDP1Q9Y5B0 961 aaPredicted RBP11.2□□□□□ -0.62
SMAD3-215ENST00000560424 PRR33A8MZF0 331 aa11.19□□□□□ -0.62
SMAD3-215ENST00000560424 RFXAPO00287 272 aa11.19□□□□□ -0.62
SMAD3-215ENST00000560424 SLC4A3P48751 1232 aa11.19□□□□□ -0.62
SMAD3-215ENST00000560424 MTX1Q13505 466 aa11.19□□□□□ -0.62
SMAD3-215ENST00000560424 ACVR2BQ13705 512 aa11.19□□□□□ -0.62
SMAD3-215ENST00000560424 TNNI3KQ59H18 835 aa11.19□□□□□ -0.62
SMAD3-215ENST00000560424 COG6Q9Y2V7 657 aa11.19□□□□□ -0.62
SMAD3-215ENST00000560424 FPGT-TNNI3KV9GXZ4 949 aa11.19□□□□□ -0.62
SMAD3-215ENST00000560424 PIEZO1Q92508 2521 aa11.19□□□□□ -0.62
SMAD3-215ENST00000560424 MUC6Q6W4X9 2439 aa11.19□□□□□ -0.62
SMAD3-215ENST00000560424 KIF28PB7ZC32 967 aa11.18□□□□□ -0.62
SMAD3-215ENST00000560424 PI4K2BG5E9Z4 385 aa11.18□□□□□ -0.62
SMAD3-215ENST00000560424 ZEB2O60315 1214 aa11.18□□□□□ -0.62
SMAD3-215ENST00000560424 CABYRO75952 493 aa11.18□□□□□ -0.62
SMAD3-215ENST00000560424 CA3P07451 260 aa11.18□□□□□ -0.62
SMAD3-215ENST00000560424 PFKMP08237 780 aa11.18□□□□□ -0.62
SMAD3-215ENST00000560424 ACTN1P12814 892 aa11.18□□□□□ -0.62
SMAD3-215ENST00000560424 POU3F3P20264 500 aaPredicted RBP11.18□□□□□ -0.62
SMAD3-215ENST00000560424 GJA9P57773 515 aa11.18□□□□□ -0.62
SMAD3-215ENST00000560424 CCDC144BQ3MJ40 725 aa11.18□□□□□ -0.62
SMAD3-215ENST00000560424 ARNTL2Q8WYA1 636 aa11.18□□□□□ -0.62
SMAD3-215ENST00000560424 CRNKL1Q9BZJ0 848 aaKnown RBP11.18□□□□□ -0.62
SMAD3-215ENST00000560424 ABHD16BQ9H3Z7 469 aa11.18□□□□□ -0.62
SMAD3-215ENST00000560424 GOPCQ9HD26 462 aa11.18□□□□□ -0.62
SMAD3-215ENST00000560424 GPR108Q9NPR9 543 aa11.18□□□□□ -0.62
SMAD3-215ENST00000560424 SWAP70Q9UH65 585 aa11.18□□□□□ -0.62
SMAD3-215ENST00000560424 TMX2Q9Y320 296 aa11.18□□□□□ -0.62
SMAD3-215ENST00000560424 NAV1Q8NEY1 1877 aa11.18□□□□□ -0.62
SMAD3-215ENST00000560424 MYO5AQ9Y4I1 1855 aaKnown RBP11.18□□□□□ -0.62
SMAD3-215ENST00000560424 COL11A1P12107 1806 aaPredicted RBP11.18□□□□□ -0.62
SMAD3-215ENST00000560424 MAGEB6P1A0A0J9YX57 407 aa11.17□□□□□ -0.62
SMAD3-215ENST00000560424 VWA5AO00534 786 aa11.17□□□□□ -0.62
SMAD3-215ENST00000560424 SNAI1O95863 264 aaPredicted RBP11.17□□□□□ -0.62
SMAD3-215ENST00000560424 CD4P01730 458 aa11.17□□□□□ -0.62
SMAD3-215ENST00000560424 GNAI2P04899 355 aa11.17□□□□□ -0.62
SMAD3-215ENST00000560424 SSTR3P32745 418 aaPredicted RBP11.17□□□□□ -0.62
SMAD3-215ENST00000560424 KIAA1755Q5JYT7 1200 aa11.17□□□□□ -0.62
SMAD3-215ENST00000560424 SNRNP48Q6IEG0 339 aaKnown RBP11.17□□□□□ -0.62
SMAD3-215ENST00000560424 B4GALNT3Q6L9W6 998 aa11.17□□□□□ -0.62
SMAD3-215ENST00000560424 TMED8Q6PL24 325 aaPredicted RBP11.17□□□□□ -0.62
SMAD3-215ENST00000560424 AMOTL1Q8IY63 956 aa11.17□□□□□ -0.62
SMAD3-215ENST00000560424 TMEM57Q8N5G2 664 aa11.17□□□□□ -0.62
SMAD3-215ENST00000560424 ZNF512BQ96KM6 892 aaPredicted RBP11.17□□□□□ -0.62
SMAD3-215ENST00000560424 TEX13BQ9BXU2 312 aa11.17□□□□□ -0.62
SMAD3-215ENST00000560424 SEZ6LQ9BYH1 1024 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms