RNA–Protein interactions for RNA: ENST00000560371.5

TRAF3-208, Transcript of TNF receptor associated factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF3, Length 7,640 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-208ENST00000560371 MYOCDQ8IZQ8 938 aa14.87□□□□□ -0.03
TRAF3-208ENST00000560371 RTEL1Q9NZ71 1219 aa14.87□□□□□ -0.03
TRAF3-208ENST00000560371 DNAJC21Q5F1R6 531 aaKnown RBP14.87□□□□□ -0.03
TRAF3-208ENST00000560371 TTC37Q6PGP7 1564 aa14.87□□□□□ -0.03
TRAF3-208ENST00000560371 AP5M1Q9H0R1 490 aa14.87□□□□□ -0.03
TRAF3-208ENST00000560371 DDAH1O94760 285 aa14.87□□□□□ -0.03
TRAF3-208ENST00000560371 PROSER3Q2NL68 480 aa14.87□□□□□ -0.03
TRAF3-208ENST00000560371 ASPRV1Q53RT3 343 aa14.87□□□□□ -0.03
TRAF3-208ENST00000560371 SFMBT2Q5VUG0 894 aa14.87□□□□□ -0.03
TRAF3-208ENST00000560371 FAM160B1Q5W0V3 765 aa14.87□□□□□ -0.03
TRAF3-208ENST00000560371 NLRP10Q86W26 655 aa14.87□□□□□ -0.03
TRAF3-208ENST00000560371 IPO4Q8TEX9 1081 aaKnown RBP14.87□□□□□ -0.03
TRAF3-208ENST00000560371 NKIRAS1Q9NYS0 192 aa14.87□□□□□ -0.03
TRAF3-208ENST00000560371 GPKOWQ92917 476 aaPredicted RBP eCLIP14.86□□□□□ -0.03
TRAF3-208ENST00000560371 NAPGQ99747 312 aaPredicted RBP14.86□□□□□ -0.03
TRAF3-208ENST00000560371 FOSP01100 380 aaPredicted RBP14.86□□□□□ -0.03
TRAF3-208ENST00000560371 ASIC3Q9UHC3 531 aa14.86□□□□□ -0.03
TRAF3-208ENST00000560371 K7ENM7 598 aa14.86□□□□□ -0.03
TRAF3-208ENST00000560371 MAGEA1P43355 309 aa14.86□□□□□ -0.03
TRAF3-208ENST00000560371 SYCE1Q8N0S2 351 aa14.86□□□□□ -0.03
TRAF3-208ENST00000560371 MYO1AQ9UBC5 1043 aa14.86□□□□□ -0.03
TRAF3-208ENST00000560371 AATKQ6ZMQ8 1374 aa14.86□□□□□ -0.03
TRAF3-208ENST00000560371 LRMPQ12912 555 aa14.86□□□□□ -0.03
TRAF3-208ENST00000560371 TMTC1Q8IUR5 882 aa14.86□□□□□ -0.03
TRAF3-208ENST00000560371 TTLL6Q8N841 843 aa14.86□□□□□ -0.03
TRAF3-208ENST00000560371 NRBP2Q9NSY0 501 aa14.86□□□□□ -0.03
TRAF3-208ENST00000560371 ZNF335Q9H4Z2 1342 aaPredicted RBP14.86□□□□□ -0.03
TRAF3-208ENST00000560371 ERVV-1B6SEH8 477 aa14.86□□□□□ -0.03
TRAF3-208ENST00000560371 MMP10P09238 476 aa14.86□□□□□ -0.03
TRAF3-208ENST00000560371 MYSM1Q5VVJ2 828 aa14.86□□□□□ -0.03
TRAF3-208ENST00000560371 C8orf74Q6P047 294 aa14.86□□□□□ -0.03
TRAF3-208ENST00000560371 PUS3Q9BZE2 481 aaKnown RBP14.86□□□□□ -0.03
TRAF3-208ENST00000560371 FAM207AQ9NSI2 230 aaPredicted RBP14.86□□□□□ -0.03
TRAF3-208ENST00000560371 PANK4Q9NVE7 773 aa14.86□□□□□ -0.03
TRAF3-208ENST00000560371 USP17L3A6NCW0 530 aa14.86□□□□□ -0.03
TRAF3-208ENST00000560371 USP17L4A6NCW7 530 aa14.86□□□□□ -0.03
TRAF3-208ENST00000560371 NPR1P16066 1061 aa14.86□□□□□ -0.03
TRAF3-208ENST00000560371 USP14P54578 494 aa14.86□□□□□ -0.03
TRAF3-208ENST00000560371 USP17L1Q7RTZ2 530 aa14.86□□□□□ -0.03
TRAF3-208ENST00000560371 POMGNT1Q8WZA1 660 aa14.86□□□□□ -0.03
TRAF3-208ENST00000560371 PALD1Q9ULE6 856 aa14.86□□□□□ -0.03
TRAF3-208ENST00000560371 CCDC89Q8N998 374 aa14.85□□□□□ -0.03
TRAF3-208ENST00000560371 NLRC4Q9NPP4 1024 aa14.85□□□□□ -0.03
TRAF3-208ENST00000560371 SEC31BQ9NQW1 1179 aa14.85□□□□□ -0.03
TRAF3-208ENST00000560371 ATF7P17544 494 aaPredicted RBP14.85□□□□□ -0.03
TRAF3-208ENST00000560371 STAT2P52630 851 aa14.85□□□□□ -0.03
TRAF3-208ENST00000560371 PFDN4Q9NQP4 134 aa14.85□□□□□ -0.03
TRAF3-208ENST00000560371 ZBTB9Q96C00 473 aa14.85□□□□□ -0.03
TRAF3-208ENST00000560371 COL4A3BPQ9Y5P4 624 aa14.85□□□□□ -0.03
TRAF3-208ENST00000560371 CLASP1Q7Z460 1538 aa14.85□□□□□ -0.03
TRAF3-208ENST00000560371 SYNMO15061 1565 aa14.85□□□□□ -0.03
TRAF3-208ENST00000560371 LRCH2Q5VUJ6 765 aa14.85□□□□□ -0.03
TRAF3-208ENST00000560371 RRAGAQ7L523 313 aa14.85□□□□□ -0.03
TRAF3-208ENST00000560371 PEX26Q7Z412 305 aa14.85□□□□□ -0.03
TRAF3-208ENST00000560371 IVLP07476 585 aa14.85□□□□□ -0.03
TRAF3-208ENST00000560371 DLATP10515 647 aaKnown RBP14.85□□□□□ -0.03
TRAF3-208ENST00000560371 PTH1RQ03431 593 aa14.85□□□□□ -0.03
TRAF3-208ENST00000560371 ARHGAP30Q7Z6I6 1101 aaPredicted RBP14.85□□□□□ -0.03
TRAF3-208ENST00000560371 KANSL2Q9H9L4 492 aa14.85□□□□□ -0.03
TRAF3-208ENST00000560371 PI4KBQ9UBF8 816 aa14.85□□□□□ -0.03
TRAF3-208ENST00000560371 ARMCX3Q9UH62 379 aaPredicted RBP14.85□□□□□ -0.03
TRAF3-208ENST00000560371 ADALQ6DHV7 355 aa14.85□□□□□ -0.03
TRAF3-208ENST00000560371 ANAPC4Q9UJX5 808 aa14.85□□□□□ -0.03
TRAF3-208ENST00000560371 ROBO2Q9HCK4 1378 aa14.84□□□□□ -0.03
TRAF3-208ENST00000560371 KCTD1Q719H9 257 aa14.84□□□□□ -0.03
TRAF3-208ENST00000560371 C1orf112Q9NSG2 853 aa14.84□□□□□ -0.03
TRAF3-208ENST00000560371 ANKFY1Q9P2R3 1169 aa14.84□□□□□ -0.03
TRAF3-208ENST00000560371 FEZ2Q9UHY8 353 aaPredicted RBP14.84□□□□□ -0.03
TRAF3-208ENST00000560371 PTGDRQ13258 359 aa14.84□□□□□ -0.03
TRAF3-208ENST00000560371 RTKN2Q8IZC4 609 aa14.84□□□□□ -0.03
TRAF3-208ENST00000560371 IMPACTQ9P2X3 320 aa14.84□□□□□ -0.03
TRAF3-208ENST00000560371 IGSF1Q8N6C5 1336 aa14.84□□□□□ -0.03
TRAF3-208ENST00000560371 HEG1Q9ULI3 1381 aa14.84□□□□□ -0.03
TRAF3-208ENST00000560371 TMEM191BP0C7N4 346 aa14.84□□□□□ -0.03
TRAF3-208ENST00000560371 RSPH3Q86UC2 560 aa14.84□□□□□ -0.03
TRAF3-208ENST00000560371 MRRFQ96E11 262 aaKnown RBP14.84□□□□□ -0.03
TRAF3-208ENST00000560371 CDC42BPAQ5VT25 1732 aa14.84□□□□□ -0.03
TRAF3-208ENST00000560371 KDM6BO15054 1643 aa14.84□□□□□ -0.03
TRAF3-208ENST00000560371 CYP4A11Q02928 519 aa14.84□□□□□ -0.03
TRAF3-208ENST00000560371 PIGBQ92521 554 aa14.84□□□□□ -0.03
TRAF3-208ENST00000560371 SECISBP2LQ93073 1101 aaKnown RBP14.84□□□□□ -0.03
TRAF3-208ENST00000560371 ZNF277Q9NRM2 450 aaPredicted RBP14.84□□□□□ -0.03
TRAF3-208ENST00000560371 CDC42BPGQ6DT37 1551 aa14.84□□□□□ -0.03
TRAF3-208ENST00000560371 IREB2P48200 963 aaKnown RBP14.84□□□□□ -0.03
TRAF3-208ENST00000560371 DAAM2Q86T65 1068 aa14.84□□□□□ -0.03
TRAF3-208ENST00000560371 SEPT9Q9UHD8 586 aaPredicted RBP14.84□□□□□ -0.03
TRAF3-208ENST00000560371 PNOCQ13519 176 aa14.83□□□□□ -0.03
TRAF3-208ENST00000560371 DHX36Q9H2U1 1008 aaKnown RBP14.83□□□□□ -0.03
TRAF3-208ENST00000560371 PRKAG2Q9UGJ0 569 aa14.83□□□□□ -0.03
TRAF3-208ENST00000560371 AKT3Q9Y243 479 aa14.83□□□□□ -0.03
TRAF3-208ENST00000560371 HS1BP3Q53T59 392 aa14.83□□□□□ -0.04
TRAF3-208ENST00000560371 ARMCX5Q6P1M9 558 aa14.83□□□□□ -0.04
TRAF3-208ENST00000560371 TRERF1Q96PN7 1200 aa14.83□□□□□ -0.04
TRAF3-208ENST00000560371 HESX1Q9UBX0 185 aa14.83□□□□□ -0.04
TRAF3-208ENST00000560371 PPP2R5CQ13362 524 aa14.83□□□□□ -0.04
TRAF3-208ENST00000560371 CBX8Q9HC52 389 aa14.83□□□□□ -0.04
TRAF3-208ENST00000560371 SERTAD1Q9UHV2 236 aa14.83□□□□□ -0.04
TRAF3-208ENST00000560371 DBNLQ9UJU6 430 aaKnown RBP14.83□□□□□ -0.04
TRAF3-208ENST00000560371 PPP2R3AQ06190 1150 aa14.83□□□□□ -0.04
TRAF3-208ENST00000560371 SEPT14Q6ZU15 432 aa14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms