RNA–Protein interactions for RNA: ENST00000560349.1

CARMIL3-203, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 1 (best)

Gene CARMIL3, Length 2,664 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-203ENST00000560349 ACTN4O43707 911 aaKnown RBP16.06■□□□□ 0.16
CARMIL3-203ENST00000560349 FILIP1Q7Z7B0 1213 aa16.06■□□□□ 0.16
CARMIL3-203ENST00000560349 PRMT6Q96LA8 375 aaPredicted RBP16.06■□□□□ 0.16
CARMIL3-203ENST00000560349 TMEM60Q9H2L4 133 aa16.06■□□□□ 0.16
CARMIL3-203ENST00000560349 TUBE1Q9UJT0 475 aa16.06■□□□□ 0.16
CARMIL3-203ENST00000560349 FOCADQ5VW36 1801 aa16.06■□□□□ 0.16
CARMIL3-203ENST00000560349 ATP2C1P98194 919 aaPredicted RBP16.05■□□□□ 0.16
CARMIL3-203ENST00000560349 MDM2Q00987 491 aaPredicted RBP16.05■□□□□ 0.16
CARMIL3-203ENST00000560349 PLIN2Q99541 437 aa16.05■□□□□ 0.16
CARMIL3-203ENST00000560349 TMEM260Q9NX78 707 aa16.05■□□□□ 0.16
CARMIL3-203ENST00000560349 SEC63Q9UGP8 760 aaKnown RBP16.05■□□□□ 0.16
CARMIL3-203ENST00000560349 CAVIN2O95810 425 aa16.05■□□□□ 0.16
CARMIL3-203ENST00000560349 CALML3P27482 149 aa16.05■□□□□ 0.16
CARMIL3-203ENST00000560349 CCDC96Q2M329 555 aa16.05■□□□□ 0.16
CARMIL3-203ENST00000560349 CFAP100Q494V2 611 aa16.05■□□□□ 0.16
CARMIL3-203ENST00000560349 JAKMIP3Q5VZ66 844 aa16.05■□□□□ 0.16
CARMIL3-203ENST00000560349 TRMT44Q8IYL2 757 aaKnown RBP16.05■□□□□ 0.16
CARMIL3-203ENST00000560349 MYRIPQ8NFW9 859 aa16.05■□□□□ 0.16
CARMIL3-203ENST00000560349 RRP36Q96EU6 259 aaKnown RBP16.05■□□□□ 0.16
CARMIL3-203ENST00000560349 SPTLC3Q9NUV7 552 aa16.05■□□□□ 0.16
CARMIL3-203ENST00000560349 BIN2Q9UBW5 565 aaPredicted RBP16.05■□□□□ 0.16
CARMIL3-203ENST00000560349 SMCO2A6NFE2 343 aa16.04■□□□□ 0.16
CARMIL3-203ENST00000560349 SMC2O95347 1197 aa16.04■□□□□ 0.16
CARMIL3-203ENST00000560349 TTLL1O95922 423 aa16.04■□□□□ 0.16
CARMIL3-203ENST00000560349 NCAPHQ15003 741 aa16.04■□□□□ 0.16
CARMIL3-203ENST00000560349 SMYD4Q8IYR2 804 aaPredicted RBP16.04■□□□□ 0.16
CARMIL3-203ENST00000560349 SPZ1Q9BXG8 430 aa16.04■□□□□ 0.16
CARMIL3-203ENST00000560349 MAN1B1Q9UKM7 699 aa16.04■□□□□ 0.16
CARMIL3-203ENST00000560349 M0R2N6 131 aa16.04■□□□□ 0.16
CARMIL3-203ENST00000560349 COBLO75128 1261 aa16.04■□□□□ 0.16
CARMIL3-203ENST00000560349 BAG6P46379 1132 aa16.04■□□□□ 0.16
CARMIL3-203ENST00000560349 TTLL6Q8N841 843 aa16.04■□□□□ 0.16
CARMIL3-203ENST00000560349 MAP7D2Q96T17 732 aa16.04■□□□□ 0.16
CARMIL3-203ENST00000560349 QSER1Q2KHR3 1735 aa16.04■□□□□ 0.16
CARMIL3-203ENST00000560349 MYH8P13535 1937 aa16.03■□□□□ 0.16
CARMIL3-203ENST00000560349 TCP10L2B9ZVM9 353 aa16.03■□□□□ 0.16
CARMIL3-203ENST00000560349 LETM2Q2VYF4 491 aa16.03■□□□□ 0.16
CARMIL3-203ENST00000560349 UIMC1Q96RL1 719 aa16.03■□□□□ 0.16
CARMIL3-203ENST00000560349 BLZF1Q9H2G9 400 aa16.03■□□□□ 0.16
CARMIL3-203ENST00000560349 IFNKQ9P0W0 207 aa16.03■□□□□ 0.16
CARMIL3-203ENST00000560349 ATF5Q9Y2D1 282 aaPredicted RBP16.03■□□□□ 0.16
CARMIL3-203ENST00000560349 IGKV6D-41A0A0C4DH26 115 aa16.03■□□□□ 0.16
CARMIL3-203ENST00000560349 SNAP25P60880 206 aa16.03■□□□□ 0.16
CARMIL3-203ENST00000560349 JAG1P78504 1218 aa16.03■□□□□ 0.16
CARMIL3-203ENST00000560349 CDAN1Q8IWY9 1227 aa16.03■□□□□ 0.16
CARMIL3-203ENST00000560349 LARGE2Q8N3Y3 721 aa16.03■□□□□ 0.16
CARMIL3-203ENST00000560349 ZNF579Q8NAF0 562 aaKnown RBP16.03■□□□□ 0.16
CARMIL3-203ENST00000560349 CCDC148Q8NFR7 591 aa16.03■□□□□ 0.16
CARMIL3-203ENST00000560349 TAL1P17542 331 aaPredicted RBP16.02■□□□□ 0.16
CARMIL3-203ENST00000560349 SEPT2Q15019 361 aa16.02■□□□□ 0.16
CARMIL3-203ENST00000560349 TSC1Q92574 1164 aa16.02■□□□□ 0.16
CARMIL3-203ENST00000560349 NUP88Q99567 741 aaPredicted RBP16.02■□□□□ 0.16
CARMIL3-203ENST00000560349 XPO4Q9C0E2 1151 aaKnown RBP16.02■□□□□ 0.16
CARMIL3-203ENST00000560349 HSD3B7Q9H2F3 369 aa16.02■□□□□ 0.16
CARMIL3-203ENST00000560349 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.02■□□□□ 0.16
CARMIL3-203ENST00000560349 COL4A5P29400 1685 aa16.02■□□□□ 0.16
CARMIL3-203ENST00000560349 PSMD14O00487 310 aa16.02■□□□□ 0.16
CARMIL3-203ENST00000560349 KCNA3P22001 575 aa16.02■□□□□ 0.16
CARMIL3-203ENST00000560349 KARSQ15046 597 aaKnown RBP16.02■□□□□ 0.16
CARMIL3-203ENST00000560349 KIAA1524Q8TCG1 905 aa16.02■□□□□ 0.16
CARMIL3-203ENST00000560349 SMARCE1Q969G3 411 aa16.02■□□□□ 0.16
CARMIL3-203ENST00000560349 TRIM34Q9BYJ4 488 aa16.02■□□□□ 0.16
CARMIL3-203ENST00000560349 SH3GLB2Q9NR46 395 aa16.02■□□□□ 0.16
CARMIL3-203ENST00000560349 EEF2P13639 858 aaKnown RBP16.02■□□□□ 0.15
CARMIL3-203ENST00000560349 FMR1Q06787 632 aaKnown RBP eCLIP16.02■□□□□ 0.15
CARMIL3-203ENST00000560349 CERKLQ49MI3 558 aaPredicted RBP16.02■□□□□ 0.15
CARMIL3-203ENST00000560349 KLHL10Q6JEL2 608 aa16.02■□□□□ 0.15
CARMIL3-203ENST00000560349 ADGRF4Q8IZF3 695 aa16.02■□□□□ 0.15
CARMIL3-203ENST00000560349 FERMT2Q96AC1 680 aa16.02■□□□□ 0.15
CARMIL3-203ENST00000560349 SWAP70Q9UH65 585 aa16.02■□□□□ 0.15
CARMIL3-203ENST00000560349 PLIN4Q96Q06 1357 aa16.01■□□□□ 0.15
CARMIL3-203ENST00000560349 GOLGA6L6A8MZA4 724 aa16.01■□□□□ 0.15
CARMIL3-203ENST00000560349 USP17L10C9JJH3 530 aa16.01■□□□□ 0.15
CARMIL3-203ENST00000560349 CCNT1O60563 726 aaKnown RBP16.01■□□□□ 0.15
CARMIL3-203ENST00000560349 PPP1R11O60927 126 aaPredicted RBP16.01■□□□□ 0.15
CARMIL3-203ENST00000560349 NOVP48745 357 aa16.01■□□□□ 0.15
CARMIL3-203ENST00000560349 UBE2SQ16763 222 aa16.01■□□□□ 0.15
CARMIL3-203ENST00000560349 SOGA3Q5TF21 947 aa16.01■□□□□ 0.15
CARMIL3-203ENST00000560349 C4orf32Q8N8J7 132 aa16.01■□□□□ 0.15
CARMIL3-203ENST00000560349 CACTINQ8WUQ7 758 aaKnown RBP16.01■□□□□ 0.15
CARMIL3-203ENST00000560349 PRIMPOLQ96LW4 560 aa16.01■□□□□ 0.15
CARMIL3-203ENST00000560349 RRP1BQ14684 758 aaKnown RBP16.01■□□□□ 0.15
CARMIL3-203ENST00000560349 SARM1Q6SZW1 724 aa16.01■□□□□ 0.15
CARMIL3-203ENST00000560349 DPF2Q92785 391 aa16.01■□□□□ 0.15
CARMIL3-203ENST00000560349 PAGE5Q96GU1 130 aa16.01■□□□□ 0.15
CARMIL3-203ENST00000560349 LZTS2Q9BRK4 669 aa16.01■□□□□ 0.15
CARMIL3-203ENST00000560349 ZMYND12Q9H0C1 365 aa16.01■□□□□ 0.15
CARMIL3-203ENST00000560349 JMJD4Q9H9V9 463 aa16.01■□□□□ 0.15
CARMIL3-203ENST00000560349 FANCLQ9NW38 375 aa16.01■□□□□ 0.15
CARMIL3-203ENST00000560349 SERPINA10Q9UK55 444 aa16.01■□□□□ 0.15
CARMIL3-203ENST00000560349 SHTN1A0MZ66 631 aa16■□□□□ 0.15
CARMIL3-203ENST00000560349 ZNF543Q08ER8 600 aa16■□□□□ 0.15
CARMIL3-203ENST00000560349 RASSF8Q8NHQ8 419 aa16■□□□□ 0.15
CARMIL3-203ENST00000560349 CSRNP1Q96S65 589 aa16■□□□□ 0.15
CARMIL3-203ENST00000560349 STX17P56962 302 aa16■□□□□ 0.15
CARMIL3-203ENST00000560349 CCDC93Q567U6 631 aa16■□□□□ 0.15
CARMIL3-203ENST00000560349 SPICE1Q8N0Z3 855 aa16■□□□□ 0.15
CARMIL3-203ENST00000560349 TBCKQ8TEA7 893 aa16■□□□□ 0.15
CARMIL3-203ENST00000560349 RIOX1Q9H6W3 641 aa16■□□□□ 0.15
CARMIL3-203ENST00000560349 VEZTQ9HBM0 779 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms