RNA–Protein interactions for RNA: ENST00000560316.1

HERC1-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 4

Gene HERC1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-207ENST00000560316 ZKSCAN2Q63HK3 967 aa20.06■□□□□ 0.8
HERC1-207ENST00000560316 ZNF365Q70YC5 407 aa20.06■□□□□ 0.8
HERC1-207ENST00000560316 VTI1AQ96AJ9 217 aa20.06■□□□□ 0.8
HERC1-207ENST00000560316 GLT1D1Q96MS3 346 aa20.06■□□□□ 0.8
HERC1-207ENST00000560316 PPP1R12CQ9BZL4 782 aa20.06■□□□□ 0.8
HERC1-207ENST00000560316 ARMT1Q9H993 441 aa20.06■□□□□ 0.8
HERC1-207ENST00000560316 EXOC6BQ9Y2D4 811 aa20.06■□□□□ 0.8
HERC1-207ENST00000560316 CDK8P49336 464 aa20.05■□□□□ 0.8
HERC1-207ENST00000560316 CDK7P50613 346 aa20.05■□□□□ 0.8
HERC1-207ENST00000560316 SLFNL1Q499Z3 407 aa20.05■□□□□ 0.8
HERC1-207ENST00000560316 FAM83BQ5T0W9 1011 aa20.05■□□□□ 0.8
HERC1-207ENST00000560316 CCDC174Q6PII3 467 aa20.05■□□□□ 0.8
HERC1-207ENST00000560316 MYH8P13535 1937 aa20.05■□□□□ 0.8
HERC1-207ENST00000560316 ELP1O95163 1332 aa20.04■□□□□ 0.8
HERC1-207ENST00000560316 MROH7Q68CQ1 1323 aa20.04■□□□□ 0.8
HERC1-207ENST00000560316 GOLIM4O00461 696 aa20.04■□□□□ 0.8
HERC1-207ENST00000560316 ADCY6O43306 1168 aa20.04■□□□□ 0.8
HERC1-207ENST00000560316 DUSP11O75319 330 aaKnown RBP20.04■□□□□ 0.8
HERC1-207ENST00000560316 ASGR1P07306 291 aa20.04■□□□□ 0.8
HERC1-207ENST00000560316 C6orf222P0C671 652 aaPredicted RBP20.04■□□□□ 0.8
HERC1-207ENST00000560316 PLA2G5P39877 138 aa20.04■□□□□ 0.8
HERC1-207ENST00000560316 TMEM199Q8N511 208 aa20.04■□□□□ 0.8
HERC1-207ENST00000560316 CCDC17Q96LX7 622 aa20.04■□□□□ 0.8
HERC1-207ENST00000560316 IL1RAPL2Q9NP60 686 aa20.04■□□□□ 0.8
HERC1-207ENST00000560316 SYNGAP1Q96PV0 1343 aa20.03■□□□□ 0.8
HERC1-207ENST00000560316 APBB1O00213 710 aa20.03■□□□□ 0.8
HERC1-207ENST00000560316 CST5P28325 142 aaPredicted RBP20.03■□□□□ 0.8
HERC1-207ENST00000560316 COPB2P35606 906 aa20.03■□□□□ 0.8
HERC1-207ENST00000560316 PSRC1Q6PGN9 363 aaPredicted RBP20.03■□□□□ 0.8
HERC1-207ENST00000560316 MSL3Q8N5Y2 521 aaKnown RBP20.03■□□□□ 0.8
HERC1-207ENST00000560316 IL27Q8NEV9 243 aa20.03■□□□□ 0.8
HERC1-207ENST00000560316 DNAJC2Q99543 621 aaKnown RBP20.03■□□□□ 0.8
HERC1-207ENST00000560316 NKX2-4Q9H2Z4 354 aa20.03■□□□□ 0.8
HERC1-207ENST00000560316 GOPCQ9HD26 462 aa20.03■□□□□ 0.8
HERC1-207ENST00000560316 CXXC1Q9P0U4 656 aaPredicted RBP20.03■□□□□ 0.8
HERC1-207ENST00000560316 MSRAQ9UJ68 235 aa20.03■□□□□ 0.8
HERC1-207ENST00000560316 RIPK3Q9Y572 518 aa20.03■□□□□ 0.8
HERC1-207ENST00000560316 NCOR1O75376 2440 aa20.03■□□□□ 0.8
HERC1-207ENST00000560316 A0A0U1RQG5 324 aaPredicted RBP20.02■□□□□ 0.8
HERC1-207ENST00000560316 ARVCFO00192 962 aa20.02■□□□□ 0.8
HERC1-207ENST00000560316 CYP2C18P33260 490 aa20.02■□□□□ 0.8
HERC1-207ENST00000560316 C12orf60Q5U649 245 aa20.02■□□□□ 0.8
HERC1-207ENST00000560316 SNRNP48Q6IEG0 339 aaKnown RBP20.02■□□□□ 0.8
HERC1-207ENST00000560316 MAMDC4Q6UXC1 1216 aa20.02■□□□□ 0.8
HERC1-207ENST00000560316 ITPRIPQ8IWB1 547 aa20.02■□□□□ 0.8
HERC1-207ENST00000560316 FAM122AQ96E09 287 aa20.02■□□□□ 0.8
HERC1-207ENST00000560316 DDX11Q96FC9 970 aa20.02■□□□□ 0.8
HERC1-207ENST00000560316 NECAB3Q96P71 396 aaPredicted RBP20.02■□□□□ 0.8
HERC1-207ENST00000560316 NUP88Q99567 741 aaPredicted RBP20.02■□□□□ 0.8
HERC1-207ENST00000560316 KANSL2Q9H9L4 492 aa20.02■□□□□ 0.8
HERC1-207ENST00000560316 BDP1A6H8Y1 2624 aa20.01■□□□□ 0.79
HERC1-207ENST00000560316 MBD4O95243 580 aa20.01■□□□□ 0.79
HERC1-207ENST00000560316 SLC4A3P48751 1232 aa20.01■□□□□ 0.79
HERC1-207ENST00000560316 ACVR2BQ13705 512 aa20.01■□□□□ 0.79
HERC1-207ENST00000560316 RAB30Q15771 203 aa20.01■□□□□ 0.79
HERC1-207ENST00000560316 CEP85Q6P2H3 762 aa20.01■□□□□ 0.79
HERC1-207ENST00000560316 C16orf86Q6ZW13 317 aa20.01■□□□□ 0.79
HERC1-207ENST00000560316 ERC1Q8IUD2 1116 aa20.01■□□□□ 0.79
HERC1-207ENST00000560316 FAM126BQ8IXS8 530 aa20.01■□□□□ 0.79
HERC1-207ENST00000560316 PCSK9Q8NBP7 692 aaKnown RBP20.01■□□□□ 0.79
HERC1-207ENST00000560316 CHD7Q9P2D1 2997 aa20.01■□□□□ 0.79
HERC1-207ENST00000560316 YBX2Q9Y2T7 364 aaKnown RBP20.01■□□□□ 0.79
HERC1-207ENST00000560316 BAZ2AQ9UIF9 1905 aaKnown RBP20.01■□□□□ 0.79
HERC1-207ENST00000560316 DNAJC25-GNG10A0A024R161 153 aa20■□□□□ 0.79
HERC1-207ENST00000560316 USP17L12C9JPN9 530 aa20■□□□□ 0.79
HERC1-207ENST00000560316 USP17L21D6R901 530 aa20■□□□□ 0.79
HERC1-207ENST00000560316 CCDC144BQ3MJ40 725 aa20■□□□□ 0.79
HERC1-207ENST00000560316 GNASQ5JWF2 1037 aa20■□□□□ 0.79
HERC1-207ENST00000560316 HERVK_113Q902F9 699 aa20■□□□□ 0.79
HERC1-207ENST00000560316 SLF1Q9BQI6 1058 aa20■□□□□ 0.79
HERC1-207ENST00000560316 TEX13BQ9BXU2 312 aa20■□□□□ 0.79
HERC1-207ENST00000560316 SPC25Q9HBM1 224 aa20■□□□□ 0.79
HERC1-207ENST00000560316 IL23AQ9NPF7 189 aa20■□□□□ 0.79
HERC1-207ENST00000560316 ATP8A2Q9NTI2 1148 aa20■□□□□ 0.79
HERC1-207ENST00000560316 CDKN2AIPQ9NXV6 580 aaPredicted RBP20■□□□□ 0.79
HERC1-207ENST00000560316 TLR3O15455 904 aaKnown RBP19.99■□□□□ 0.79
HERC1-207ENST00000560316 RLBP1P12271 317 aa19.99■□□□□ 0.79
HERC1-207ENST00000560316 GJA9P57773 515 aa19.99■□□□□ 0.79
HERC1-207ENST00000560316 FTSJ3Q8IY81 847 aaKnown RBP19.99■□□□□ 0.79
HERC1-207ENST00000560316 BCL11AQ9H165 835 aa19.99■□□□□ 0.79
HERC1-207ENST00000560316 UPF3AQ9H1J1 476 aaKnown RBP19.99■□□□□ 0.79
HERC1-207ENST00000560316 SLC28A3Q9HAS3 691 aa19.99■□□□□ 0.79
HERC1-207ENST00000560316 CD4P01730 458 aa19.98■□□□□ 0.79
HERC1-207ENST00000560316 CPXCR1Q8N123 301 aa19.98■□□□□ 0.79
HERC1-207ENST00000560316 MICALL1Q8N3F8 863 aa19.98■□□□□ 0.79
HERC1-207ENST00000560316 RHPN1Q8TCX5 695 aa19.98■□□□□ 0.79
HERC1-207ENST00000560316 FGD4Q96M96 766 aa19.98■□□□□ 0.79
HERC1-207ENST00000560316 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.98■□□□□ 0.79
HERC1-207ENST00000560316 UMODL1Q5DID0 1318 aa19.98■□□□□ 0.79
HERC1-207ENST00000560316 REV3LO60673 3130 aa19.98■□□□□ 0.79
HERC1-207ENST00000560316 TCF20Q9UGU0 1960 aaKnown RBP19.97■□□□□ 0.79
HERC1-207ENST00000560316 CTAGE5O15320 804 aa19.97■□□□□ 0.79
HERC1-207ENST00000560316 FGBP02675 491 aa19.97■□□□□ 0.79
HERC1-207ENST00000560316 CHGBP05060 677 aa19.97■□□□□ 0.79
HERC1-207ENST00000560316 ADD2P35612 726 aa19.97■□□□□ 0.79
HERC1-207ENST00000560316 RABGGTBP53611 331 aa19.97■□□□□ 0.79
HERC1-207ENST00000560316 BEX3Q00994 111 aa19.97■□□□□ 0.79
HERC1-207ENST00000560316 TFF2Q03403 129 aa19.97■□□□□ 0.79
HERC1-207ENST00000560316 OTOP2Q7RTS6 562 aa19.97■□□□□ 0.79
HERC1-207ENST00000560316 ZNF467Q7Z7K2 595 aaPredicted RBP19.97■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms