RNA–Protein interactions for RNA: ENST00000560314.1

LINC02253-202, Transcript of long intergenic non-protein coding RNA 2253, humanhuman

TSL 5 BASIC

Gene LINC02253, Length 565 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02253-202ENST00000560314 RASA1P20936 1047 aa13.35□□□□□ -0.27
LINC02253-202ENST00000560314 TLE2Q04725 743 aa13.35□□□□□ -0.27
LINC02253-202ENST00000560314 C9orf50Q5SZB4 431 aa13.35□□□□□ -0.27
LINC02253-202ENST00000560314 MAMDC4Q6UXC1 1216 aa13.35□□□□□ -0.27
LINC02253-202ENST00000560314 ZNF467Q7Z7K2 595 aaPredicted RBP13.35□□□□□ -0.27
LINC02253-202ENST00000560314 NUP133Q8WUM0 1156 aa13.35□□□□□ -0.27
LINC02253-202ENST00000560314 TRIM43Q96BQ3 446 aaPredicted RBP13.35□□□□□ -0.27
LINC02253-202ENST00000560314 GPATCH3Q96I76 525 aa13.35□□□□□ -0.27
LINC02253-202ENST00000560314 TOX2Q96NM4 488 aa13.35□□□□□ -0.27
LINC02253-202ENST00000560314 STRBPQ96SI9 672 aaKnown RBP13.35□□□□□ -0.27
LINC02253-202ENST00000560314 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.35□□□□□ -0.27
LINC02253-202ENST00000560314 ECHDC1Q9NTX5 307 aa13.35□□□□□ -0.27
LINC02253-202ENST00000560314 PLIN4Q96Q06 1357 aa13.34□□□□□ -0.27
LINC02253-202ENST00000560314 CHGBP05060 677 aa13.34□□□□□ -0.27
LINC02253-202ENST00000560314 ZFYP08048 801 aaPredicted RBP13.34□□□□□ -0.27
LINC02253-202ENST00000560314 GNAT2P19087 354 aa13.34□□□□□ -0.27
LINC02253-202ENST00000560314 SNRNP48Q6IEG0 339 aaKnown RBP13.34□□□□□ -0.27
LINC02253-202ENST00000560314 ANKRD33Q7Z3H0 272 aa13.34□□□□□ -0.27
LINC02253-202ENST00000560314 SH3RF1Q7Z6J0 888 aa13.34□□□□□ -0.27
LINC02253-202ENST00000560314 KBTBD3Q8NAB2 608 aa13.34□□□□□ -0.27
LINC02253-202ENST00000560314 PRPF38AQ8NAV1 312 aaKnown RBP13.34□□□□□ -0.27
LINC02253-202ENST00000560314 APPBP2Q92624 585 aa13.34□□□□□ -0.27
LINC02253-202ENST00000560314 FAM161BQ96MY7 647 aa13.34□□□□□ -0.27
LINC02253-202ENST00000560314 MKNK2Q9HBH9 465 aa13.34□□□□□ -0.27
LINC02253-202ENST00000560314 MROH7Q68CQ1 1323 aa13.34□□□□□ -0.27
LINC02253-202ENST00000560314 SYNRGQ9UMZ2 1314 aa13.34□□□□□ -0.27
LINC02253-202ENST00000560314 DNAJC25-GNG10A0A024R161 153 aa13.33□□□□□ -0.28
LINC02253-202ENST00000560314 GSG1L2A8MUP6 293 aa13.33□□□□□ -0.28
LINC02253-202ENST00000560314 PQBP1O60828 265 aaKnown RBP13.33□□□□□ -0.28
LINC02253-202ENST00000560314 NDUFB10O96000 172 aa13.33□□□□□ -0.28
LINC02253-202ENST00000560314 RAG1P15918 1043 aa13.33□□□□□ -0.28
LINC02253-202ENST00000560314 TAL1P17542 331 aaPredicted RBP13.33□□□□□ -0.28
LINC02253-202ENST00000560314 CST5P28325 142 aaPredicted RBP13.33□□□□□ -0.28
LINC02253-202ENST00000560314 LRRFIP1Q32MZ4 808 aaKnown RBP13.33□□□□□ -0.28
LINC02253-202ENST00000560314 DIEXFQ68CQ4 756 aaKnown RBP13.33□□□□□ -0.28
LINC02253-202ENST00000560314 POTEHQ6S545 545 aa13.33□□□□□ -0.28
LINC02253-202ENST00000560314 DDX11Q96FC9 970 aa13.33□□□□□ -0.28
LINC02253-202ENST00000560314 RNPC3Q96LT9 517 aaKnown RBP13.33□□□□□ -0.28
LINC02253-202ENST00000560314 CDX2Q99626 313 aaPredicted RBP13.33□□□□□ -0.28
LINC02253-202ENST00000560314 SEMA6BQ9H3T3 888 aa13.33□□□□□ -0.28
LINC02253-202ENST00000560314 STARD7Q9NQZ5 370 aa13.33□□□□□ -0.28
LINC02253-202ENST00000560314 FBXO40Q9UH90 709 aa13.33□□□□□ -0.28
LINC02253-202ENST00000560314 RCAN3Q9UKA8 241 aa13.33□□□□□ -0.28
LINC02253-202ENST00000560314 FAM184BQ9ULE4 1060 aa13.33□□□□□ -0.28
LINC02253-202ENST00000560314 TTC28Q96AY4 2481 aa13.32□□□□□ -0.28
LINC02253-202ENST00000560314 DCDC2CA8MYV0 355 aa13.32□□□□□ -0.28
LINC02253-202ENST00000560314 F5H6K3 240 aa13.32□□□□□ -0.28
LINC02253-202ENST00000560314 ZBED4O75132 1171 aa13.32□□□□□ -0.28
LINC02253-202ENST00000560314 DUSP11O75319 330 aaKnown RBP13.32□□□□□ -0.28
LINC02253-202ENST00000560314 FDX1P10109 184 aa13.32□□□□□ -0.28
LINC02253-202ENST00000560314 ACLYP53396 1101 aa13.32□□□□□ -0.28
LINC02253-202ENST00000560314 OAZ1P54368 228 aa13.32□□□□□ -0.28
LINC02253-202ENST00000560314 FPGSQ05932 587 aa13.32□□□□□ -0.28
LINC02253-202ENST00000560314 KLRC3Q07444 240 aa13.32□□□□□ -0.28
LINC02253-202ENST00000560314 PCSK9Q8NBP7 692 aaKnown RBP13.32□□□□□ -0.28
LINC02253-202ENST00000560314 KLHDC9Q8NEP7 349 aa13.32□□□□□ -0.28
LINC02253-202ENST00000560314 CHST13Q8NET6 341 aa13.32□□□□□ -0.28
LINC02253-202ENST00000560314 MAFAQ8NHW3 353 aaPredicted RBP13.32□□□□□ -0.28
LINC02253-202ENST00000560314 COL25A1Q9BXS0 654 aaPredicted RBP13.32□□□□□ -0.28
LINC02253-202ENST00000560314 CTDP1Q9Y5B0 961 aaPredicted RBP13.32□□□□□ -0.28
LINC02253-202ENST00000560314 MYO9BQ13459 2157 aa13.32□□□□□ -0.28
LINC02253-202ENST00000560314 ELP1O95163 1332 aa13.32□□□□□ -0.28
LINC02253-202ENST00000560314 IGKV6D-41A0A0C4DH26 115 aa13.31□□□□□ -0.28
LINC02253-202ENST00000560314 GPAA1O43292 621 aa13.31□□□□□ -0.28
LINC02253-202ENST00000560314 SNAI1O95863 264 aaPredicted RBP13.31□□□□□ -0.28
LINC02253-202ENST00000560314 TTLL1O95922 423 aa13.31□□□□□ -0.28
LINC02253-202ENST00000560314 ITGB8P26012 769 aa13.31□□□□□ -0.28
LINC02253-202ENST00000560314 TDO2P48775 406 aa13.31□□□□□ -0.28
LINC02253-202ENST00000560314 ZNF444Q8N0Y2 327 aaPredicted RBP13.31□□□□□ -0.28
LINC02253-202ENST00000560314 GMCL1P1Q8NEA9 526 aa13.31□□□□□ -0.28
LINC02253-202ENST00000560314 OSBP2Q969R2 916 aa13.31□□□□□ -0.28
LINC02253-202ENST00000560314 MKL1Q969V6 931 aa13.31□□□□□ -0.28
LINC02253-202ENST00000560314 LENG1Q96BZ8 264 aaPredicted RBP13.31□□□□□ -0.28
LINC02253-202ENST00000560314 NUP88Q99567 741 aaPredicted RBP13.31□□□□□ -0.28
LINC02253-202ENST00000560314 ABHD16BQ9H3Z7 469 aa13.31□□□□□ -0.28
LINC02253-202ENST00000560314 SPC25Q9HBM1 224 aa13.31□□□□□ -0.28
LINC02253-202ENST00000560314 SLC38A10Q9HBR0 1119 aa13.31□□□□□ -0.28
LINC02253-202ENST00000560314 TMEM39AQ9NV64 488 aa13.31□□□□□ -0.28
LINC02253-202ENST00000560314 FEM1BQ9UK73 627 aa13.31□□□□□ -0.28
LINC02253-202ENST00000560314 ZHX1Q9UKY1 873 aaPredicted RBP13.31□□□□□ -0.28
LINC02253-202ENST00000560314 MINDY4BA8MYZ0 360 aa13.3□□□□□ -0.28
LINC02253-202ENST00000560314 RNF113AO15541 343 aaKnown RBP13.3□□□□□ -0.28
LINC02253-202ENST00000560314 SMARCA5O60264 1052 aaPredicted RBP13.3□□□□□ -0.28
LINC02253-202ENST00000560314 FAAP100Q0VG06 881 aa13.3□□□□□ -0.28
LINC02253-202ENST00000560314 PPP4R3BQ5MIZ7 849 aa13.3□□□□□ -0.28
LINC02253-202ENST00000560314 CCSAPQ6IQ19 270 aaPredicted RBP13.3□□□□□ -0.28
LINC02253-202ENST00000560314 CCDC174Q6PII3 467 aa13.3□□□□□ -0.28
LINC02253-202ENST00000560314 ANKRD35Q8N283 1001 aa13.3□□□□□ -0.28
LINC02253-202ENST00000560314 CEP95Q96GE4 821 aa13.3□□□□□ -0.28
LINC02253-202ENST00000560314 GLT1D1Q96MS3 346 aa13.3□□□□□ -0.28
LINC02253-202ENST00000560314 UPF3AQ9H1J1 476 aaKnown RBP13.3□□□□□ -0.28
LINC02253-202ENST00000560314 TTYH1Q9H313 450 aaPredicted RBP13.3□□□□□ -0.28
LINC02253-202ENST00000560314 EPB41L4AQ9HCS5 686 aaPredicted RBP13.3□□□□□ -0.28
LINC02253-202ENST00000560314 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.3□□□□□ -0.28
LINC02253-202ENST00000560314 MTMR4Q9NYA4 1195 aa13.3□□□□□ -0.28
LINC02253-202ENST00000560314 CLIP2Q9UDT6 1046 aa13.3□□□□□ -0.28
LINC02253-202ENST00000560314 RIPK3Q9Y572 518 aa13.3□□□□□ -0.28
LINC02253-202ENST00000560314 VCANP13611 3396 aa13.3□□□□□ -0.28
LINC02253-202ENST00000560314 TIMP1P01033 207 aa13.29□□□□□ -0.28
LINC02253-202ENST00000560314 FOSL2P15408 326 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms