RNA–Protein interactions for RNA: ENST00000560243.5

RABGGTA-216, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 704 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-216ENST00000560243 RCSD1Q6JBY9 416 aa13.76□□□□□ -0.21
RABGGTA-216ENST00000560243 KCTD1Q719H9 257 aa13.76□□□□□ -0.21
RABGGTA-216ENST00000560243 DPP9Q86TI2 863 aa13.76□□□□□ -0.21
RABGGTA-216ENST00000560243 TRMT44Q8IYL2 757 aaKnown RBP13.76□□□□□ -0.21
RABGGTA-216ENST00000560243 CPXCR1Q8N123 301 aa13.76□□□□□ -0.21
RABGGTA-216ENST00000560243 TMEM47Q9BQJ4 181 aa13.76□□□□□ -0.21
RABGGTA-216ENST00000560243 ZKSCAN3Q9BRR0 538 aa13.76□□□□□ -0.21
RABGGTA-216ENST00000560243 CRISPLD2Q9H0B8 497 aa13.76□□□□□ -0.21
RABGGTA-216ENST00000560243 FEM1BQ9UK73 627 aa13.76□□□□□ -0.21
RABGGTA-216ENST00000560243 SLC25A27O95847 323 aa13.75□□□□□ -0.21
RABGGTA-216ENST00000560243 PGK2P07205 417 aa13.75□□□□□ -0.21
RABGGTA-216ENST00000560243 FCER1AP12319 257 aa13.75□□□□□ -0.21
RABGGTA-216ENST00000560243 SLC1A4P43007 532 aa13.75□□□□□ -0.21
RABGGTA-216ENST00000560243 SLC4A3P48751 1232 aa13.75□□□□□ -0.21
RABGGTA-216ENST00000560243 SNAP25P60880 206 aa13.75□□□□□ -0.21
RABGGTA-216ENST00000560243 SNRNP48Q6IEG0 339 aaKnown RBP13.75□□□□□ -0.21
RABGGTA-216ENST00000560243 CENPQQ7L2Z9 268 aaPredicted RBP13.75□□□□□ -0.21
RABGGTA-216ENST00000560243 TRPV1Q8NER1 839 aa13.75□□□□□ -0.21
RABGGTA-216ENST00000560243 TEX13BQ9BXU2 312 aa13.75□□□□□ -0.21
RABGGTA-216ENST00000560243 RNF41Q9H4P4 317 aaPredicted RBP13.75□□□□□ -0.21
RABGGTA-216ENST00000560243 SLC38A10Q9HBR0 1119 aa13.75□□□□□ -0.21
RABGGTA-216ENST00000560243 RAVER2Q9HCJ3 691 aaKnown RBP13.75□□□□□ -0.21
RABGGTA-216ENST00000560243 TCP11L1Q9NUJ3 509 aa13.75□□□□□ -0.21
RABGGTA-216ENST00000560243 PLXNA1Q9UIW2 1896 aa13.74□□□□□ -0.21
RABGGTA-216ENST00000560243 RAD50Q92878 1312 aa13.74□□□□□ -0.21
RABGGTA-216ENST00000560243 B4E1Z4 1266 aa13.74□□□□□ -0.21
RABGGTA-216ENST00000560243 ZBED4O75132 1171 aa13.74□□□□□ -0.21
RABGGTA-216ENST00000560243 KDM4AO75164 1064 aa13.74□□□□□ -0.21
RABGGTA-216ENST00000560243 FARP2O94887 1054 aaPredicted RBP13.74□□□□□ -0.21
RABGGTA-216ENST00000560243 TOP1P11387 765 aaKnown RBP13.74□□□□□ -0.21
RABGGTA-216ENST00000560243 PCP11498 1178 aaKnown RBP13.74□□□□□ -0.21
RABGGTA-216ENST00000560243 STAT2P52630 851 aa13.74□□□□□ -0.21
RABGGTA-216ENST00000560243 PPP4R3BQ5MIZ7 849 aa13.74□□□□□ -0.21
RABGGTA-216ENST00000560243 TTBK2Q6IQ55 1244 aa13.74□□□□□ -0.21
RABGGTA-216ENST00000560243 ABRAQ8N0Z2 381 aa13.74□□□□□ -0.21
RABGGTA-216ENST00000560243 DIS3LQ8TF46 1054 aaKnown RBP13.74□□□□□ -0.21
RABGGTA-216ENST00000560243 MMP19Q99542 508 aa13.74□□□□□ -0.21
RABGGTA-216ENST00000560243 TAF6LQ9Y6J9 622 aa13.74□□□□□ -0.21
RABGGTA-216ENST00000560243 SMCHD1A6NHR9 2005 aa13.74□□□□□ -0.21
RABGGTA-216ENST00000560243 ATP2A1O14983 1001 aa13.73□□□□□ -0.21
RABGGTA-216ENST00000560243 SGSM2O43147 1006 aa13.73□□□□□ -0.21
RABGGTA-216ENST00000560243 SLC16A2P36021 539 aa13.73□□□□□ -0.21
RABGGTA-216ENST00000560243 MNX1P50219 401 aaPredicted RBP13.73□□□□□ -0.21
RABGGTA-216ENST00000560243 IKQ13123 557 aaPredicted RBP13.73□□□□□ -0.21
RABGGTA-216ENST00000560243 IMMTQ16891 758 aaKnown RBP13.73□□□□□ -0.21
RABGGTA-216ENST00000560243 CCDC96Q2M329 555 aa13.73□□□□□ -0.21
RABGGTA-216ENST00000560243 MFSD14CQ5VZR4 134 aa13.73□□□□□ -0.21
RABGGTA-216ENST00000560243 RUFY2Q8WXA3 655 aa13.73□□□□□ -0.21
RABGGTA-216ENST00000560243 ESR2Q92731 530 aa13.73□□□□□ -0.21
RABGGTA-216ENST00000560243 CTNNA3Q9UI47 895 aa13.73□□□□□ -0.21
RABGGTA-216ENST00000560243 PRR12Q9ULL5 1215 aa13.73□□□□□ -0.21
RABGGTA-216ENST00000560243 ZNF536O15090 1300 aa13.72□□□□□ -0.21
RABGGTA-216ENST00000560243 FRMPD2Q68DX3 1309 aaPredicted RBP13.72□□□□□ -0.21
RABGGTA-216ENST00000560243 FRMPD3Q5JV73 1810 aa13.72□□□□□ -0.21
RABGGTA-216ENST00000560243 TAL1P17542 331 aaPredicted RBP13.72□□□□□ -0.21
RABGGTA-216ENST00000560243 KCTD2Q14681 263 aa13.72□□□□□ -0.21
RABGGTA-216ENST00000560243 PRAMEF19Q5SWL8 479 aa13.72□□□□□ -0.21
RABGGTA-216ENST00000560243 OLFML2BQ68BL8 750 aa13.72□□□□□ -0.21
RABGGTA-216ENST00000560243 LHX8Q68G74 356 aa13.72□□□□□ -0.21
RABGGTA-216ENST00000560243 FAM160B2Q86V87 743 aa13.72□□□□□ -0.21
RABGGTA-216ENST00000560243 CHURC1Q8WUH1 139 aa13.72□□□□□ -0.21
RABGGTA-216ENST00000560243 DCAF4Q8WV16 495 aa13.72□□□□□ -0.21
RABGGTA-216ENST00000560243 PAWRQ96IZ0 340 aaKnown RBP13.72□□□□□ -0.21
RABGGTA-216ENST00000560243 MAML3Q96JK9 1138 aa13.72□□□□□ -0.21
RABGGTA-216ENST00000560243 AGBL1Q96MI9 1066 aa13.72□□□□□ -0.21
RABGGTA-216ENST00000560243 GPCPD1Q9NPB8 672 aa13.72□□□□□ -0.21
RABGGTA-216ENST00000560243 HOMER2Q9NSB8 354 aa13.72□□□□□ -0.21
RABGGTA-216ENST00000560243 ZSWIM5Q9P217 1185 aa13.72□□□□□ -0.21
RABGGTA-216ENST00000560243 CTDP1Q9Y5B0 961 aaPredicted RBP13.72□□□□□ -0.21
RABGGTA-216ENST00000560243 PLA2G6O60733 806 aa13.71□□□□□ -0.21
RABGGTA-216ENST00000560243 CYP21A2P08686 494 aa13.71□□□□□ -0.21
RABGGTA-216ENST00000560243 PDHBP11177 359 aa13.71□□□□□ -0.21
RABGGTA-216ENST00000560243 CYBAP13498 195 aa13.71□□□□□ -0.21
RABGGTA-216ENST00000560243 ZNF792Q3KQV3 632 aa13.71□□□□□ -0.21
RABGGTA-216ENST00000560243 PRPF38BQ5VTL8 546 aaKnown RBP13.71□□□□□ -0.21
RABGGTA-216ENST00000560243 CCDC174Q6PII3 467 aa13.71□□□□□ -0.21
RABGGTA-216ENST00000560243 TTC14Q96N46 770 aa13.71□□□□□ -0.21
RABGGTA-216ENST00000560243 OGDHLQ9ULD0 1010 aa13.71□□□□□ -0.21
RABGGTA-216ENST00000560243 DNAH12Q6ZR08 3092 aa13.71□□□□□ -0.22
RABGGTA-216ENST00000560243 ALPK3Q96L96 1907 aa13.7□□□□□ -0.22
RABGGTA-216ENST00000560243 DNAJC25-GNG10A0A024R161 153 aa13.7□□□□□ -0.22
RABGGTA-216ENST00000560243 CNGA1P29973 690 aa13.7□□□□□ -0.22
RABGGTA-216ENST00000560243 COPB2P35606 906 aa13.7□□□□□ -0.22
RABGGTA-216ENST00000560243 OAZ1P54368 228 aa13.7□□□□□ -0.22
RABGGTA-216ENST00000560243 CYB5R4Q7L1T6 521 aa13.7□□□□□ -0.22
RABGGTA-216ENST00000560243 ENAHQ8N8S7 591 aaPredicted RBP13.7□□□□□ -0.22
RABGGTA-216ENST00000560243 CCDC136Q96JN2 1154 aa13.7□□□□□ -0.22
RABGGTA-216ENST00000560243 ZSCAN10Q96SZ4 725 aaPredicted RBP13.7□□□□□ -0.22
RABGGTA-216ENST00000560243 MCM3APO60318 1980 aa13.7□□□□□ -0.22
RABGGTA-216ENST00000560243 GOLGA8HP0CJ92 632 aa13.69□□□□□ -0.22
RABGGTA-216ENST00000560243 SNHG28P0DPA3 235 aa13.69□□□□□ -0.22
RABGGTA-216ENST00000560243 ZNF543Q08ER8 600 aa13.69□□□□□ -0.22
RABGGTA-216ENST00000560243 SYDE2Q5VT97 1194 aa13.69□□□□□ -0.22
RABGGTA-216ENST00000560243 ANO1Q5XXA6 986 aa13.69□□□□□ -0.22
RABGGTA-216ENST00000560243 BTNL9Q6UXG8 535 aa13.69□□□□□ -0.22
RABGGTA-216ENST00000560243 STOX1Q6ZVD7 989 aa13.69□□□□□ -0.22
RABGGTA-216ENST00000560243 IQCA1Q86XH1 822 aa13.69□□□□□ -0.22
RABGGTA-216ENST00000560243 DGKHQ86XP1 1220 aa13.69□□□□□ -0.22
RABGGTA-216ENST00000560243 ANKS1AQ92625 1134 aa13.69□□□□□ -0.22
RABGGTA-216ENST00000560243 DDX11Q96FC9 970 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms