RNA–Protein interactions for RNA: ENST00000560196.5

ZEB1-218, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 1 (best)

Gene ZEB1, Length 1,014 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-218ENST00000560196 CPVLQ9H3G5 476 aa16.6■□□□□ 0.25
ZEB1-218ENST00000560196 SH2D4AQ9H788 454 aa16.6■□□□□ 0.25
ZEB1-218ENST00000560196 JMJD4Q9H9V9 463 aa16.6■□□□□ 0.25
ZEB1-218ENST00000560196 RNF181Q9P0P0 153 aa16.6■□□□□ 0.25
ZEB1-218ENST00000560196 PITPNM2Q9BZ72 1349 aa16.6■□□□□ 0.25
ZEB1-218ENST00000560196 BAZ2BQ9UIF8 2168 aaKnown RBP16.6■□□□□ 0.25
ZEB1-218ENST00000560196 A0A1W2PRG0 241 aa16.59■□□□□ 0.25
ZEB1-218ENST00000560196 TRIM75PA6NK02 468 aa16.59■□□□□ 0.25
ZEB1-218ENST00000560196 CUTAO60888 179 aa16.59■□□□□ 0.25
ZEB1-218ENST00000560196 NDUFB10O96000 172 aa16.59■□□□□ 0.25
ZEB1-218ENST00000560196 GNA11P29992 359 aa16.59■□□□□ 0.25
ZEB1-218ENST00000560196 DCAF15Q66K64 600 aa16.59■□□□□ 0.25
ZEB1-218ENST00000560196 TTBK2Q6IQ55 1244 aa16.59■□□□□ 0.25
ZEB1-218ENST00000560196 LRSAM1Q6UWE0 723 aa16.59■□□□□ 0.25
ZEB1-218ENST00000560196 MIGA2Q7L4E1 593 aa16.59■□□□□ 0.25
ZEB1-218ENST00000560196 CCAR1Q8IX12 1150 aaKnown RBP16.59■□□□□ 0.25
ZEB1-218ENST00000560196 TRPM4Q8TD43 1214 aa16.59■□□□□ 0.25
ZEB1-218ENST00000560196 MRPS27Q92552 414 aaKnown RBP16.59■□□□□ 0.25
ZEB1-218ENST00000560196 C6orf50Q9HD87 102 aa16.59■□□□□ 0.25
ZEB1-218ENST00000560196 CTNND1O60716 968 aaKnown RBP16.58■□□□□ 0.24
ZEB1-218ENST00000560196 BMP3P12645 472 aa16.58■□□□□ 0.24
ZEB1-218ENST00000560196 CMA1P23946 247 aa16.58■□□□□ 0.24
ZEB1-218ENST00000560196 DEKP35659 375 aaKnown RBP16.58■□□□□ 0.24
ZEB1-218ENST00000560196 NAPAP54920 295 aa16.58■□□□□ 0.24
ZEB1-218ENST00000560196 FAM160A1Q05DH4 1040 aa16.58■□□□□ 0.24
ZEB1-218ENST00000560196 MAPK8IP2Q13387 824 aaPredicted RBP16.58■□□□□ 0.24
ZEB1-218ENST00000560196 EARS2Q5JPH6 523 aaKnown RBP16.58■□□□□ 0.24
ZEB1-218ENST00000560196 L1TD1Q5T7N2 865 aaKnown RBP16.58■□□□□ 0.24
ZEB1-218ENST00000560196 CCDC73Q6ZRK6 1079 aa16.58■□□□□ 0.24
ZEB1-218ENST00000560196 KCTD1Q719H9 257 aa16.58■□□□□ 0.24
ZEB1-218ENST00000560196 ENGASEQ8NFI3 743 aa16.58■□□□□ 0.24
ZEB1-218ENST00000560196 VAT1LQ9HCJ6 419 aa16.58■□□□□ 0.24
ZEB1-218ENST00000560196 GOPCQ9HD26 462 aa16.58■□□□□ 0.24
ZEB1-218ENST00000560196 DACT1Q9NYF0 836 aa16.58■□□□□ 0.24
ZEB1-218ENST00000560196 ASTN2O75129 1339 aaPredicted RBP16.58■□□□□ 0.24
ZEB1-218ENST00000560196 ZC3H4Q9UPT8 1303 aaKnown RBP16.58■□□□□ 0.24
ZEB1-218ENST00000560196 FAM237AA0A1B0GTK4 181 aa16.57■□□□□ 0.24
ZEB1-218ENST00000560196 ZBTB5O15062 677 aa16.57■□□□□ 0.24
ZEB1-218ENST00000560196 PLA2G6O60733 806 aa16.57■□□□□ 0.24
ZEB1-218ENST00000560196 PTPREP23469 700 aa16.57■□□□□ 0.24
ZEB1-218ENST00000560196 EPS15P42566 896 aa16.57■□□□□ 0.24
ZEB1-218ENST00000560196 ANGEL2Q5VTE6 544 aaKnown RBP16.57■□□□□ 0.24
ZEB1-218ENST00000560196 C9orf131Q5VYM1 1079 aa16.57■□□□□ 0.24
ZEB1-218ENST00000560196 GAS2L3Q86XJ1 694 aa16.57■□□□□ 0.24
ZEB1-218ENST00000560196 HOMER1Q86YM7 354 aa16.57■□□□□ 0.24
ZEB1-218ENST00000560196 FSIP1Q8NA03 581 aa16.57■□□□□ 0.24
ZEB1-218ENST00000560196 NUP62CLQ9H1M0 184 aa16.57■□□□□ 0.24
ZEB1-218ENST00000560196 CLSTN2Q9H4D0 955 aa16.57■□□□□ 0.24
ZEB1-218ENST00000560196 VCPKMTQ9H867 229 aa16.57■□□□□ 0.24
ZEB1-218ENST00000560196 ADARB2Q9NS39 739 aaKnown RBP16.57■□□□□ 0.24
ZEB1-218ENST00000560196 ZNF112Q9UJU3 913 aa16.57■□□□□ 0.24
ZEB1-218ENST00000560196 PCDHB6Q9Y5E3 794 aa16.57■□□□□ 0.24
ZEB1-218ENST00000560196 SYCE3A1L190 88 aa16.56■□□□□ 0.24
ZEB1-218ENST00000560196 FAM205CA6NFA0 338 aa16.56■□□□□ 0.24
ZEB1-218ENST00000560196 SMCO2A6NFE2 343 aa16.56■□□□□ 0.24
ZEB1-218ENST00000560196 NR1I2O75469 434 aa16.56■□□□□ 0.24
ZEB1-218ENST00000560196 LMOD1P29536 600 aaPredicted RBP16.56■□□□□ 0.24
ZEB1-218ENST00000560196 HIRAP54198 1017 aaPredicted RBP16.56■□□□□ 0.24
ZEB1-218ENST00000560196 TTC38Q5R3I4 469 aa16.56■□□□□ 0.24
ZEB1-218ENST00000560196 RBM43Q6ZSC3 357 aaKnown RBP16.56■□□□□ 0.24
ZEB1-218ENST00000560196 KRT25Q7Z3Z0 450 aa16.56■□□□□ 0.24
ZEB1-218ENST00000560196 KRI1Q8N9T8 703 aaKnown RBP16.56■□□□□ 0.24
ZEB1-218ENST00000560196 ZNF579Q8NAF0 562 aaKnown RBP16.56■□□□□ 0.24
ZEB1-218ENST00000560196 ACER1Q8TDN7 264 aa16.56■□□□□ 0.24
ZEB1-218ENST00000560196 ZNF341Q9BYN7 854 aa16.56■□□□□ 0.24
ZEB1-218ENST00000560196 GLT8D2Q9H1C3 349 aa16.56■□□□□ 0.24
ZEB1-218ENST00000560196 GOLPH3LQ9H4A5 285 aa16.56■□□□□ 0.24
ZEB1-218ENST00000560196 PCDHA6Q9UN73 950 aa16.56■□□□□ 0.24
ZEB1-218ENST00000560196 PCDHA8Q9Y5H6 950 aa16.56■□□□□ 0.24
ZEB1-218ENST00000560196 CCDC194A0A1B0GVG4 234 aa16.55■□□□□ 0.24
ZEB1-218ENST00000560196 USP17L10C9JJH3 530 aa16.55■□□□□ 0.24
ZEB1-218ENST00000560196 CTAGE5O15320 804 aa16.55■□□□□ 0.24
ZEB1-218ENST00000560196 DDNO94850 711 aaPredicted RBP16.55■□□□□ 0.24
ZEB1-218ENST00000560196 MARCKSP29966 332 aaPredicted RBP16.55■□□□□ 0.24
ZEB1-218ENST00000560196 MRE11P49959 708 aa16.55■□□□□ 0.24
ZEB1-218ENST00000560196 SNW1Q13573 536 aaKnown RBP16.55■□□□□ 0.24
ZEB1-218ENST00000560196 NBPF12Q5TAG4 269 aaPredicted RBP16.55■□□□□ 0.24
ZEB1-218ENST00000560196 SYDE2Q5VT97 1194 aa16.55■□□□□ 0.24
ZEB1-218ENST00000560196 PIK3AP1Q6ZUJ8 805 aa16.55■□□□□ 0.24
ZEB1-218ENST00000560196 TEX2Q8IWB9 1127 aa16.55■□□□□ 0.24
ZEB1-218ENST00000560196 FMR1NBQ8N0W7 255 aaPredicted RBP16.55■□□□□ 0.24
ZEB1-218ENST00000560196 L3MBTL3Q96JM7 780 aaPredicted RBP16.55■□□□□ 0.24
ZEB1-218ENST00000560196 GGA3Q9NZ52 723 aa16.55■□□□□ 0.24
ZEB1-218ENST00000560196 FBXO2Q9UK22 296 aaPredicted RBP16.55■□□□□ 0.24
ZEB1-218ENST00000560196 SRPRBQ9Y5M8 271 aaKnown RBP16.55■□□□□ 0.24
ZEB1-218ENST00000560196 ADAMTS3O15072 1205 aa16.54■□□□□ 0.24
ZEB1-218ENST00000560196 PPP1R11O60927 126 aaPredicted RBP16.54■□□□□ 0.24
ZEB1-218ENST00000560196 SLC16A2P36021 539 aa16.54■□□□□ 0.24
ZEB1-218ENST00000560196 ECE1P42892 770 aa16.54■□□□□ 0.24
ZEB1-218ENST00000560196 ADCY7P51828 1080 aa16.54■□□□□ 0.24
ZEB1-218ENST00000560196 TRAF1Q13077 416 aa16.54■□□□□ 0.24
ZEB1-218ENST00000560196 ORC2Q13416 577 aaPredicted RBP16.54■□□□□ 0.24
ZEB1-218ENST00000560196 MAP3K11Q16584 847 aa16.54■□□□□ 0.24
ZEB1-218ENST00000560196 QRICH1Q2TAL8 776 aa16.54■□□□□ 0.24
ZEB1-218ENST00000560196 NOM1Q5C9Z4 860 aaKnown RBP16.54■□□□□ 0.24
ZEB1-218ENST00000560196 RESP18Q5W5W9 173 aa16.54■□□□□ 0.24
ZEB1-218ENST00000560196 FERMT2Q96AC1 680 aa16.54■□□□□ 0.24
ZEB1-218ENST00000560196 RIC8AQ9NPQ8 531 aa16.54■□□□□ 0.24
ZEB1-218ENST00000560196 HPSEQ9Y251 543 aa16.54■□□□□ 0.24
ZEB1-218ENST00000560196 TMEM232C9JQI7 657 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms