RNA–Protein interactions for RNA: ENST00000559931.5

SMAD6-204, Transcript of SMAD family member 6, humanhuman

TSL 3

Gene SMAD6, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-204ENST00000559931 LOC285556D6RIA3 1793 aa16.69■□□□□ 0.26
SMAD6-204ENST00000559931 BAZ2BQ9UIF8 2168 aaKnown RBP16.68■□□□□ 0.26
SMAD6-204ENST00000559931 IGF2BP3O00425 579 aaKnown RBP eCLIP16.68■□□□□ 0.26
SMAD6-204ENST00000559931 HSPA1AP0DMV8 641 aaKnown RBP16.68■□□□□ 0.26
SMAD6-204ENST00000559931 HSPA1BP0DMV9 641 aaKnown RBP16.68■□□□□ 0.26
SMAD6-204ENST00000559931 RCAN1P53805 252 aa16.68■□□□□ 0.26
SMAD6-204ENST00000559931 ME3Q16798 604 aa16.68■□□□□ 0.26
SMAD6-204ENST00000559931 NECAB1Q8N987 351 aa16.68■□□□□ 0.26
SMAD6-204ENST00000559931 PRPF38AQ8NAV1 312 aaKnown RBP16.68■□□□□ 0.26
SMAD6-204ENST00000559931 SMCR8Q8TEV9 937 aaPredicted RBP16.68■□□□□ 0.26
SMAD6-204ENST00000559931 P2RX7Q99572 595 aaKnown RBP16.68■□□□□ 0.26
SMAD6-204ENST00000559931 LZTS2Q9BRK4 669 aa16.68■□□□□ 0.26
SMAD6-204ENST00000559931 CPVLQ9H3G5 476 aa16.68■□□□□ 0.26
SMAD6-204ENST00000559931 NCOA5Q9HCD5 579 aaKnown RBP16.68■□□□□ 0.26
SMAD6-204ENST00000559931 HPS5Q9UPZ3 1129 aa16.68■□□□□ 0.26
SMAD6-204ENST00000559931 SLC45A1Q9Y2W3 748 aa16.68■□□□□ 0.26
SMAD6-204ENST00000559931 PFKFB2O60825 505 aa16.67■□□□□ 0.26
SMAD6-204ENST00000559931 CD2BP2O95400 341 aaKnown RBP16.67■□□□□ 0.26
SMAD6-204ENST00000559931 ADD1P35611 737 aaKnown RBP16.67■□□□□ 0.26
SMAD6-204ENST00000559931 TAF1CQ15572 869 aaPredicted RBP16.67■□□□□ 0.26
SMAD6-204ENST00000559931 SYDE2Q5VT97 1194 aa16.67■□□□□ 0.26
SMAD6-204ENST00000559931 CPLX2Q6PUV4 134 aaKnown RBP16.67■□□□□ 0.26
SMAD6-204ENST00000559931 CMTR1Q8N1G2 835 aaKnown RBP16.67■□□□□ 0.26
SMAD6-204ENST00000559931 PIBF1Q8WXW3 757 aa16.67■□□□□ 0.26
SMAD6-204ENST00000559931 PARK7Q99497 189 aaKnown RBP16.67■□□□□ 0.26
SMAD6-204ENST00000559931 BEGAINQ9BUH8 593 aa16.67■□□□□ 0.26
SMAD6-204ENST00000559931 SH2B1Q9NRF2 756 aaPredicted RBP16.67■□□□□ 0.26
SMAD6-204ENST00000559931 WBP1LQ9NX94 342 aa16.67■□□□□ 0.26
SMAD6-204ENST00000559931 PLA2G6O60733 806 aa16.66■□□□□ 0.26
SMAD6-204ENST00000559931 ZBED4O75132 1171 aa16.66■□□□□ 0.26
SMAD6-204ENST00000559931 PLEKHA8P1O95397 391 aa16.66■□□□□ 0.26
SMAD6-204ENST00000559931 ALDH1A1P00352 501 aa16.66■□□□□ 0.26
SMAD6-204ENST00000559931 CYP2C8P10632 490 aa16.66■□□□□ 0.26
SMAD6-204ENST00000559931 CDC27P30260 824 aa16.66■□□□□ 0.26
SMAD6-204ENST00000559931 DSG3P32926 999 aa16.66■□□□□ 0.26
SMAD6-204ENST00000559931 HSCBQ8IWL3 235 aa16.66■□□□□ 0.26
SMAD6-204ENST00000559931 ZCCHC17Q9NP64 241 aaKnown RBP16.66■□□□□ 0.26
SMAD6-204ENST00000559931 TSKSQ9UJT2 592 aa16.66■□□□□ 0.26
SMAD6-204ENST00000559931 PPP1R9AQ9ULJ8 1098 aa16.66■□□□□ 0.26
SMAD6-204ENST00000559931 PRR12Q9ULL5 1215 aa16.66■□□□□ 0.26
SMAD6-204ENST00000559931 LARGE1O95461 756 aa16.65■□□□□ 0.26
SMAD6-204ENST00000559931 SLC4A3P48751 1232 aa16.65■□□□□ 0.26
SMAD6-204ENST00000559931 SNAP25P60880 206 aa16.65■□□□□ 0.26
SMAD6-204ENST00000559931 HERVK_113P62684 666 aa16.65■□□□□ 0.26
SMAD6-204ENST00000559931 AKAP17AQ02040 695 aaKnown RBP16.65■□□□□ 0.26
SMAD6-204ENST00000559931 SCRN1Q12765 414 aa16.65■□□□□ 0.26
SMAD6-204ENST00000559931 BTNL9Q6UXG8 535 aa16.65■□□□□ 0.26
SMAD6-204ENST00000559931 TMTC3Q6ZXV5 915 aa16.65■□□□□ 0.26
SMAD6-204ENST00000559931 ADGRF4Q8IZF3 695 aa16.65■□□□□ 0.26
SMAD6-204ENST00000559931 SRBD1Q8N5C6 995 aaKnown RBP16.65■□□□□ 0.26
SMAD6-204ENST00000559931 ATG4CQ96DT6 458 aa16.65■□□□□ 0.26
SMAD6-204ENST00000559931 TMX3Q96JJ7 454 aa16.65■□□□□ 0.26
SMAD6-204ENST00000559931 ZFYVE28Q9HCC9 887 aa16.65■□□□□ 0.26
SMAD6-204ENST00000559931 FAM217BQ9NTX9 383 aaPredicted RBP16.65■□□□□ 0.26
SMAD6-204ENST00000559931 TRPA1O75762 1119 aa16.64■□□□□ 0.25
SMAD6-204ENST00000559931 CDKL5O76039 1030 aa16.64■□□□□ 0.25
SMAD6-204ENST00000559931 PLS1Q14651 629 aa16.64■□□□□ 0.25
SMAD6-204ENST00000559931 NBPF11Q86T75 865 aa16.64■□□□□ 0.25
SMAD6-204ENST00000559931 HOMER1Q86YM7 354 aa16.64■□□□□ 0.25
SMAD6-204ENST00000559931 CCDC83Q8IWF9 413 aa16.64■□□□□ 0.25
SMAD6-204ENST00000559931 GTF3C6Q969F1 213 aa16.64■□□□□ 0.25
SMAD6-204ENST00000559931 SNX21Q969T3 373 aa16.64■□□□□ 0.25
SMAD6-204ENST00000559931 RRP36Q96EU6 259 aaKnown RBP16.64■□□□□ 0.25
SMAD6-204ENST00000559931 PAGR1Q9BTK6 254 aa16.64■□□□□ 0.25
SMAD6-204ENST00000559931 RNF186Q9NXI6 227 aa16.64■□□□□ 0.25
SMAD6-204ENST00000559931 MYH6P13533 1939 aa16.63■□□□□ 0.25
SMAD6-204ENST00000559931 SPDYE16A6NNV3 312 aaPredicted RBP16.63■□□□□ 0.25
SMAD6-204ENST00000559931 VWA5AO00534 786 aa16.63■□□□□ 0.25
SMAD6-204ENST00000559931 FOXN1O15353 648 aa16.63■□□□□ 0.25
SMAD6-204ENST00000559931 PPFIA3O75145 1194 aa16.63■□□□□ 0.25
SMAD6-204ENST00000559931 FDX1P10109 184 aa16.63■□□□□ 0.25
SMAD6-204ENST00000559931 SMARCA1P28370 1054 aa16.63■□□□□ 0.25
SMAD6-204ENST00000559931 GCLCP48506 637 aaPredicted RBP16.63■□□□□ 0.25
SMAD6-204ENST00000559931 SSRP1Q08945 709 aaKnown RBP16.63■□□□□ 0.25
SMAD6-204ENST00000559931 CCDC174Q6PII3 467 aa16.63■□□□□ 0.25
SMAD6-204ENST00000559931 CPXCR1Q8N123 301 aa16.63■□□□□ 0.25
SMAD6-204ENST00000559931 GTF3C2Q8WUA4 911 aaPredicted RBP16.63■□□□□ 0.25
SMAD6-204ENST00000559931 SPZ1Q9BXG8 430 aa16.63■□□□□ 0.25
SMAD6-204ENST00000559931 JMJD4Q9H9V9 463 aa16.63■□□□□ 0.25
SMAD6-204ENST00000559931 SEC63Q9UGP8 760 aaKnown RBP16.63■□□□□ 0.25
SMAD6-204ENST00000559931 V9GY48 417 aaPredicted RBP16.63■□□□□ 0.25
SMAD6-204ENST00000559931 MYPNQ86TC9 1320 aa16.63■□□□□ 0.25
SMAD6-204ENST00000559931 CASP8AP2Q9UKL3 1982 aa16.62■□□□□ 0.25
SMAD6-204ENST00000559931 K7ELQ4 463 aaPredicted RBP16.62■□□□□ 0.25
SMAD6-204ENST00000559931 CA12O43570 354 aa16.62■□□□□ 0.25
SMAD6-204ENST00000559931 CRHR2Q13324 411 aa16.62■□□□□ 0.25
SMAD6-204ENST00000559931 BECN1Q14457 450 aa16.62■□□□□ 0.25
SMAD6-204ENST00000559931 TRIM22Q8IYM9 498 aa16.62■□□□□ 0.25
SMAD6-204ENST00000559931 MB21D1Q8N884 522 aa16.62■□□□□ 0.25
SMAD6-204ENST00000559931 PHKBQ93100 1093 aa16.62■□□□□ 0.25
SMAD6-204ENST00000559931 PIGSQ96S52 555 aa16.62■□□□□ 0.25
SMAD6-204ENST00000559931 SLC26A6Q9BXS9 759 aa16.62■□□□□ 0.25
SMAD6-204ENST00000559931 RIOX1Q9H6W3 641 aa16.62■□□□□ 0.25
SMAD6-204ENST00000559931 PARP14Q460N5 1801 aa16.61■□□□□ 0.25
SMAD6-204ENST00000559931 hCG_1642624A0A1W2PR95 340 aa16.61■□□□□ 0.25
SMAD6-204ENST00000559931 CYTH3O43739 400 aa16.61■□□□□ 0.25
SMAD6-204ENST00000559931 TBC1D8O95759 1140 aa16.61■□□□□ 0.25
SMAD6-204ENST00000559931 HSP90AA1P07900 732 aaKnown RBP16.61■□□□□ 0.25
SMAD6-204ENST00000559931 IFNAR1P17181 557 aa16.61■□□□□ 0.25
SMAD6-204ENST00000559931 ANP32AP39687 249 aaKnown RBP16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms