RNA–Protein interactions for RNA: ENST00000559819.5

LRRC28-216, Transcript of leucine rich repeat containing 28, humanhuman

TSL 2

Gene LRRC28, Length 2,712 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-216ENST00000559819 M0R2N6 131 aa11.36□□□□□ -0.59
LRRC28-216ENST00000559819 PAK1Q13153 545 aa11.36□□□□□ -0.59
LRRC28-216ENST00000559819 FILIP1LQ4L180 1135 aa11.36□□□□□ -0.59
LRRC28-216ENST00000559819 WDR66Q8TBY9 1149 aa11.36□□□□□ -0.59
LRRC28-216ENST00000559819 LONP1P36776 959 aaKnown RBP11.35□□□□□ -0.59
LRRC28-216ENST00000559819 PRCPP42785 496 aa11.35□□□□□ -0.59
LRRC28-216ENST00000559819 COPB1P53618 953 aaKnown RBP11.35□□□□□ -0.59
LRRC28-216ENST00000559819 GPSM2P81274 684 aa11.35□□□□□ -0.59
LRRC28-216ENST00000559819 NAALADL2Q58DX5 795 aa11.35□□□□□ -0.59
LRRC28-216ENST00000559819 ZNF444Q8N0Y2 327 aaPredicted RBP11.35□□□□□ -0.59
LRRC28-216ENST00000559819 RWDD2AQ9UIY3 292 aa11.35□□□□□ -0.59
LRRC28-216ENST00000559819 ADGRG1Q9Y653 693 aa11.35□□□□□ -0.59
LRRC28-216ENST00000559819 SBF2Q86WG5 1849 aa11.35□□□□□ -0.59
LRRC28-216ENST00000559819 GOLGA6L9A6NEM1 432 aa11.35□□□□□ -0.59
LRRC28-216ENST00000559819 STXBP3O00186 592 aa11.35□□□□□ -0.59
LRRC28-216ENST00000559819 N4BP3O15049 544 aa11.35□□□□□ -0.59
LRRC28-216ENST00000559819 RGL2O15211 777 aa11.35□□□□□ -0.59
LRRC28-216ENST00000559819 SEC31AO94979 1220 aaKnown RBP11.35□□□□□ -0.59
LRRC28-216ENST00000559819 CCDC175P0C221 793 aa11.35□□□□□ -0.59
LRRC28-216ENST00000559819 RASA1P20936 1047 aa11.35□□□□□ -0.59
LRRC28-216ENST00000559819 RFC4P35249 363 aa11.35□□□□□ -0.59
LRRC28-216ENST00000559819 BTDP43251 543 aa11.35□□□□□ -0.59
LRRC28-216ENST00000559819 MAP3K9P80192 1104 aa11.35□□□□□ -0.59
LRRC28-216ENST00000559819 PPP2R3AQ06190 1150 aa11.35□□□□□ -0.59
LRRC28-216ENST00000559819 ZNF658Q5TYW1 1059 aaPredicted RBP11.35□□□□□ -0.59
LRRC28-216ENST00000559819 KRT222Q8N1A0 295 aa11.35□□□□□ -0.59
LRRC28-216ENST00000559819 ACRBPQ8NEB7 543 aa11.35□□□□□ -0.59
LRRC28-216ENST00000559819 RASSF8Q8NHQ8 419 aa11.35□□□□□ -0.59
LRRC28-216ENST00000559819 CCDC12Q8WUD4 166 aaPredicted RBP11.35□□□□□ -0.59
LRRC28-216ENST00000559819 ANKS1AQ92625 1134 aa11.35□□□□□ -0.59
LRRC28-216ENST00000559819 CTAGE1Q96RT6 745 aa11.35□□□□□ -0.59
LRRC28-216ENST00000559819 FAM53CQ9NYF3 392 aa11.35□□□□□ -0.59
LRRC28-216ENST00000559819 LIMA1Q9UHB6 759 aaKnown RBP11.35□□□□□ -0.59
LRRC28-216ENST00000559819 MRFAP1Q9Y605 127 aa11.35□□□□□ -0.59
LRRC28-216ENST00000559819 BTAF1O14981 1849 aa11.35□□□□□ -0.59
LRRC28-216ENST00000559819 CCDC88AQ3V6T2 1871 aa11.35□□□□□ -0.59
LRRC28-216ENST00000559819 KCNJ18B7U540 433 aa11.34□□□□□ -0.59
LRRC28-216ENST00000559819 PMS1P54277 932 aaKnown RBP11.34□□□□□ -0.59
LRRC28-216ENST00000559819 KCNJ12Q14500 433 aa11.34□□□□□ -0.59
LRRC28-216ENST00000559819 TEX35Q5T0J7 233 aa11.34□□□□□ -0.59
LRRC28-216ENST00000559819 ARL6IP4Q66PJ3 421 aaKnown RBP11.34□□□□□ -0.59
LRRC28-216ENST00000559819 DTHD1Q6ZMT9 781 aa11.34□□□□□ -0.59
LRRC28-216ENST00000559819 PKNOX2Q96KN3 472 aa11.34□□□□□ -0.59
LRRC28-216ENST00000559819 RTFDC1Q9BY42 306 aaPredicted RBP11.34□□□□□ -0.59
LRRC28-216ENST00000559819 SH3GLB2Q9NR46 395 aa11.34□□□□□ -0.59
LRRC28-216ENST00000559819 DISC1Q9NRI5 854 aa11.34□□□□□ -0.59
LRRC28-216ENST00000559819 LEMD3Q9Y2U8 911 aa11.34□□□□□ -0.59
LRRC28-216ENST00000559819 ROBO3Q96MS0 1386 aa11.34□□□□□ -0.59
LRRC28-216ENST00000559819 BAG3O95817 575 aa11.34□□□□□ -0.59
LRRC28-216ENST00000559819 ABL1P00519 1130 aa11.34□□□□□ -0.59
LRRC28-216ENST00000559819 TXLNAP40222 546 aa11.34□□□□□ -0.59
LRRC28-216ENST00000559819 ERVK-24P63145 666 aa11.34□□□□□ -0.59
LRRC28-216ENST00000559819 TCP11X2Q5H9J9 407 aa11.34□□□□□ -0.59
LRRC28-216ENST00000559819 UTP14CQ5TAP6 766 aaKnown RBP11.34□□□□□ -0.59
LRRC28-216ENST00000559819 FAM196AQ6ZSG2 479 aa11.34□□□□□ -0.59
LRRC28-216ENST00000559819 ZSWIM4Q9H7M6 989 aa11.34□□□□□ -0.59
LRRC28-216ENST00000559819 PALM3A6NDB9 673 aaPredicted RBP11.33□□□□□ -0.6
LRRC28-216ENST00000559819 TRAPPC3LQ5T215 181 aa11.33□□□□□ -0.6
LRRC28-216ENST00000559819 ZNF804AQ7Z570 1209 aa11.33□□□□□ -0.6
LRRC28-216ENST00000559819 CNBD1Q8NA66 436 aa11.33□□□□□ -0.6
LRRC28-216ENST00000559819 SRRTQ9BXP5 876 aaKnown RBP11.33□□□□□ -0.6
LRRC28-216ENST00000559819 GTPBP4Q9BZE4 634 aaKnown RBP11.33□□□□□ -0.6
LRRC28-216ENST00000559819 VAT1LQ9HCJ6 419 aa11.33□□□□□ -0.6
LRRC28-216ENST00000559819 BARHL2Q9NY43 387 aa11.33□□□□□ -0.6
LRRC28-216ENST00000559819 FHOD1Q9Y613 1164 aa11.33□□□□□ -0.6
LRRC28-216ENST00000559819 EFCAB8A8MWE9 144 aa11.33□□□□□ -0.6
LRRC28-216ENST00000559819 KLRF2D3W0D1 207 aa11.33□□□□□ -0.6
LRRC28-216ENST00000559819 GSTO1P78417 241 aa11.33□□□□□ -0.6
LRRC28-216ENST00000559819 USP17L2Q6R6M4 530 aa11.33□□□□□ -0.6
LRRC28-216ENST00000559819 AMOTL1Q8IY63 956 aa11.33□□□□□ -0.6
LRRC28-216ENST00000559819 SNED1Q8TER0 1413 aa11.32□□□□□ -0.6
LRRC28-216ENST00000559819 KLRC4O43908 158 aa11.32□□□□□ -0.6
LRRC28-216ENST00000559819 UFL1O94874 794 aa11.32□□□□□ -0.6
LRRC28-216ENST00000559819 TFRCP02786 760 aaKnown RBP11.32□□□□□ -0.6
LRRC28-216ENST00000559819 CDK8P49336 464 aa11.32□□□□□ -0.6
LRRC28-216ENST00000559819 PPP4CP60510 307 aa11.32□□□□□ -0.6
LRRC28-216ENST00000559819 PRR5LQ6MZQ0 368 aa11.32□□□□□ -0.6
LRRC28-216ENST00000559819 IRF2BP1Q8IU81 584 aa11.32□□□□□ -0.6
LRRC28-216ENST00000559819 TEX11Q8IYF3 940 aa11.32□□□□□ -0.6
LRRC28-216ENST00000559819 EYA3Q99504 573 aa11.32□□□□□ -0.6
LRRC28-216ENST00000559819 NUP88Q99567 741 aaPredicted RBP11.32□□□□□ -0.6
LRRC28-216ENST00000559819 PYM1Q9BRP8 204 aaKnown RBP11.32□□□□□ -0.6
LRRC28-216ENST00000559819 ABHD10Q9NUJ1 306 aa11.32□□□□□ -0.6
LRRC28-216ENST00000559819 RMND1Q9NWS8 449 aa11.32□□□□□ -0.6
LRRC28-216ENST00000559819 ITIH6Q6UXX5 1313 aa11.32□□□□□ -0.6
LRRC28-216ENST00000559819 UBA7P41226 1012 aa11.32□□□□□ -0.6
LRRC28-216ENST00000559819 GNAQP50148 359 aa11.32□□□□□ -0.6
LRRC28-216ENST00000559819 NAPAP54920 295 aa11.32□□□□□ -0.6
LRRC28-216ENST00000559819 CNGA4Q8IV77 575 aa11.32□□□□□ -0.6
LRRC28-216ENST00000559819 ADSSL1Q8N142 457 aa11.32□□□□□ -0.6
LRRC28-216ENST00000559819 DAGLBQ8NCG7 672 aa11.32□□□□□ -0.6
LRRC28-216ENST00000559819 CCDC148Q8NFR7 591 aa11.32□□□□□ -0.6
LRRC28-216ENST00000559819 EEF2KMTQ96G04 330 aa11.32□□□□□ -0.6
LRRC28-216ENST00000559819 NAA15Q9BXJ9 866 aaKnown RBP11.32□□□□□ -0.6
LRRC28-216ENST00000559819 CD209Q9NNX6 404 aa11.32□□□□□ -0.6
LRRC28-216ENST00000559819 TCP11L1Q9NUJ3 509 aa11.32□□□□□ -0.6
LRRC28-216ENST00000559819 NAV1Q8NEY1 1877 aa11.32□□□□□ -0.6
LRRC28-216ENST00000559819 PARP1P09874 1014 aaKnown RBP11.31□□□□□ -0.6
LRRC28-216ENST00000559819 PNMA6AP0CW24 399 aaPredicted RBP11.31□□□□□ -0.6
LRRC28-216ENST00000559819 UBXN1Q04323 297 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms