RNA–Protein interactions for RNA: ENST00000559738.1

CTDSPL2-207, Transcript of CTD small phosphatase like 2, humanhuman

TSL 4

Gene CTDSPL2, Length 543 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-207ENST00000559738 TSPAN15O95858 294 aa6.84□□□□□ -1.31
CTDSPL2-207ENST00000559738 TP53P04637 393 aaPredicted RBP6.84□□□□□ -1.31
CTDSPL2-207ENST00000559738 RAP1GAPP47736 663 aa6.84□□□□□ -1.31
CTDSPL2-207ENST00000559738 TIGD5Q53EQ6 642 aa6.84□□□□□ -1.31
CTDSPL2-207ENST00000559738 ZPBP2Q6X784 338 aa6.84□□□□□ -1.31
CTDSPL2-207ENST00000559738 OXR1Q8N573 874 aa6.84□□□□□ -1.31
CTDSPL2-207ENST00000559738 FBXO15Q8NCQ5 510 aaPredicted RBP6.84□□□□□ -1.31
CTDSPL2-207ENST00000559738 LINC00116Q8NCU8 138 aa6.84□□□□□ -1.31
CTDSPL2-207ENST00000559738 LINC01599Q8WXQ3 324 aa6.84□□□□□ -1.31
CTDSPL2-207ENST00000559738 EPB41L4BQ9H329 900 aa6.84□□□□□ -1.31
CTDSPL2-207ENST00000559738 FAM86C1Q9NVL1 165 aa6.84□□□□□ -1.31
CTDSPL2-207ENST00000559738 TCFL5Q9UL49 500 aa6.84□□□□□ -1.31
CTDSPL2-207ENST00000559738 A0A1W2PQH9 124 aa6.83□□□□□ -1.32
CTDSPL2-207ENST00000559738 SYPP08247 313 aa6.83□□□□□ -1.32
CTDSPL2-207ENST00000559738 ATF4P18848 351 aaPredicted RBP6.83□□□□□ -1.32
CTDSPL2-207ENST00000559738 RPL10P27635 214 aaKnown RBP6.83□□□□□ -1.32
CTDSPL2-207ENST00000559738 FAM169BQ8N8A8 192 aa6.83□□□□□ -1.32
CTDSPL2-207ENST00000559738 DHX38Q92620 1227 aaKnown RBP6.83□□□□□ -1.32
CTDSPL2-207ENST00000559738 KCNK12Q9HB15 430 aa6.83□□□□□ -1.32
CTDSPL2-207ENST00000559738 DCP1AQ9NPI6 582 aaPredicted RBP6.83□□□□□ -1.32
CTDSPL2-207ENST00000559738 FITM1A5D6W6 292 aa6.82□□□□□ -1.32
CTDSPL2-207ENST00000559738 NOTOA8MTQ0 251 aa6.82□□□□□ -1.32
CTDSPL2-207ENST00000559738 FKTNO75072 461 aa6.82□□□□□ -1.32
CTDSPL2-207ENST00000559738 PCBP3P57721 371 aaKnown RBP6.82□□□□□ -1.32
CTDSPL2-207ENST00000559738 ANKRD39Q53RE8 183 aa6.82□□□□□ -1.32
CTDSPL2-207ENST00000559738 WAPLQ7Z5K2 1190 aa6.82□□□□□ -1.32
CTDSPL2-207ENST00000559738 C19orf47Q8N9M1 422 aaKnown RBP6.82□□□□□ -1.32
CTDSPL2-207ENST00000559738 OR6P1Q8NGX9 317 aa6.82□□□□□ -1.32
CTDSPL2-207ENST00000559738 SMARCC1Q92922 1105 aaPredicted RBP6.82□□□□□ -1.32
CTDSPL2-207ENST00000559738 PRR13Q9NZ81 148 aa6.82□□□□□ -1.32
CTDSPL2-207ENST00000559738 PCDHB10Q9UN67 800 aa6.82□□□□□ -1.32
CTDSPL2-207ENST00000559738 ZNF451Q9Y4E5 1061 aa6.82□□□□□ -1.32
CTDSPL2-207ENST00000559738 CBFA2T2O43439 604 aa6.81□□□□□ -1.32
CTDSPL2-207ENST00000559738 EFEMP2O95967 443 aa6.81□□□□□ -1.32
CTDSPL2-207ENST00000559738 ZNF445P59923 1031 aa6.81□□□□□ -1.32
CTDSPL2-207ENST00000559738 DUSP4Q13115 394 aa6.81□□□□□ -1.32
CTDSPL2-207ENST00000559738 CRTC3Q6UUV7 619 aa6.81□□□□□ -1.32
CTDSPL2-207ENST00000559738 LILRA2Q8N149 483 aa6.81□□□□□ -1.32
CTDSPL2-207ENST00000559738 CPLX3Q8WVH0 158 aa6.81□□□□□ -1.32
CTDSPL2-207ENST00000559738 GP6Q9HCN6 339 aa6.81□□□□□ -1.32
CTDSPL2-207ENST00000559738 IGSF5Q9NSI5 407 aa6.81□□□□□ -1.32
CTDSPL2-207ENST00000559738 NFIBO00712 420 aa6.8□□□□□ -1.32
CTDSPL2-207ENST00000559738 C1QTNF9P0C862 333 aa6.8□□□□□ -1.32
CTDSPL2-207ENST00000559738 CD247P20963 164 aa6.8□□□□□ -1.32
CTDSPL2-207ENST00000559738 BMP8BP34820 402 aa6.8□□□□□ -1.32
CTDSPL2-207ENST00000559738 CASP7P55210 303 aa6.8□□□□□ -1.32
CTDSPL2-207ENST00000559738 NR0B2Q15466 257 aa6.8□□□□□ -1.32
CTDSPL2-207ENST00000559738 CILP2Q8IUL8 1156 aa6.8□□□□□ -1.32
CTDSPL2-207ENST00000559738 ANKS4BQ8N8V4 417 aa6.8□□□□□ -1.32
CTDSPL2-207ENST00000559738 KLHL6Q8WZ60 621 aa6.8□□□□□ -1.32
CTDSPL2-207ENST00000559738 BRF1Q92994 677 aa6.8□□□□□ -1.32
CTDSPL2-207ENST00000559738 MAP6Q96JE9 813 aa6.8□□□□□ -1.32
CTDSPL2-207ENST00000559738 CAPN10Q9HC96 672 aa6.8□□□□□ -1.32
CTDSPL2-207ENST00000559738 GPR160Q9UJ42 338 aa6.8□□□□□ -1.32
CTDSPL2-207ENST00000559738 SSU72P8A0A1W2PR75 194 aa6.79□□□□□ -1.32
CTDSPL2-207ENST00000559738 H0Y8X5 98 aa6.79□□□□□ -1.32
CTDSPL2-207ENST00000559738 USP2O75604 605 aaPredicted RBP6.79□□□□□ -1.32
CTDSPL2-207ENST00000559738 ZNF205O95201 554 aa6.79□□□□□ -1.32
CTDSPL2-207ENST00000559738 KRT1P04264 644 aa6.79□□□□□ -1.32
CTDSPL2-207ENST00000559738 VAV1P15498 845 aa6.79□□□□□ -1.32
CTDSPL2-207ENST00000559738 CEBPAP49715 358 aaPredicted RBP6.79□□□□□ -1.32
CTDSPL2-207ENST00000559738 PPP2R5EQ16537 467 aa6.79□□□□□ -1.32
CTDSPL2-207ENST00000559738 GNPTABQ3T906 1256 aa6.79□□□□□ -1.32
CTDSPL2-207ENST00000559738 SPOCD1Q6ZMY3 1216 aa6.79□□□□□ -1.32
CTDSPL2-207ENST00000559738 ANKLE2Q86XL3 938 aa6.79□□□□□ -1.32
CTDSPL2-207ENST00000559738 SHISA4Q96DD7 197 aa6.79□□□□□ -1.32
CTDSPL2-207ENST00000559738 ANAPC16Q96DE5 110 aa6.79□□□□□ -1.32
CTDSPL2-207ENST00000559738 HHIPL1Q96JK4 782 aa6.79□□□□□ -1.32
CTDSPL2-207ENST00000559738 TOX2Q96NM4 488 aa6.79□□□□□ -1.32
CTDSPL2-207ENST00000559738 TINF2Q9BSI4 451 aa6.79□□□□□ -1.32
CTDSPL2-207ENST00000559738 DSCC1Q9BVC3 393 aa6.79□□□□□ -1.32
CTDSPL2-207ENST00000559738 PHAXQ9H814 394 aaKnown RBP6.79□□□□□ -1.32
CTDSPL2-207ENST00000559738 ZMYM5Q9UJ78 669 aa6.79□□□□□ -1.32
CTDSPL2-207ENST00000559738 STRIP2Q9ULQ0 834 aa6.79□□□□□ -1.32
CTDSPL2-207ENST00000559738 SLC12A7Q9Y666 1083 aa6.79□□□□□ -1.32
CTDSPL2-207ENST00000559738 PSPNO60542 156 aa6.78□□□□□ -1.32
CTDSPL2-207ENST00000559738 GALK1P51570 392 aa6.78□□□□□ -1.32
CTDSPL2-207ENST00000559738 CHRNEQ04844 493 aa6.78□□□□□ -1.32
CTDSPL2-207ENST00000559738 RTP2Q5QGT7 225 aa6.78□□□□□ -1.32
CTDSPL2-207ENST00000559738 SPPL2CQ8IUH8 684 aa6.78□□□□□ -1.32
CTDSPL2-207ENST00000559738 INTS4Q96HW7 963 aaKnown RBP6.78□□□□□ -1.32
CTDSPL2-207ENST00000559738 HAUS7Q99871 368 aa6.78□□□□□ -1.32
CTDSPL2-207ENST00000559738 SLC6A17Q9H1V8 727 aa6.78□□□□□ -1.32
CTDSPL2-207ENST00000559738 CWC22Q9HCG8 908 aaKnown RBP6.78□□□□□ -1.32
CTDSPL2-207ENST00000559738 FHOD1Q9Y613 1164 aa6.78□□□□□ -1.32
CTDSPL2-207ENST00000559738 GSNP06396 782 aa6.77□□□□□ -1.33
CTDSPL2-207ENST00000559738 TMEM253P0C7T8 217 aa6.77□□□□□ -1.33
CTDSPL2-207ENST00000559738 CFPP27918 469 aa6.77□□□□□ -1.33
CTDSPL2-207ENST00000559738 SLC7A5Q01650 507 aa6.77□□□□□ -1.33
CTDSPL2-207ENST00000559738 NOL9Q5SY16 702 aaKnown RBP6.77□□□□□ -1.33
CTDSPL2-207ENST00000559738 LRRC56Q8IYG6 542 aaPredicted RBP6.77□□□□□ -1.33
CTDSPL2-207ENST00000559738 FIBCD1Q8N539 461 aa6.77□□□□□ -1.33
CTDSPL2-207ENST00000559738 SLC12A9Q9BXP2 914 aa6.77□□□□□ -1.33
CTDSPL2-207ENST00000559738 KRTAP4-9Q9BYQ8 210 aa6.77□□□□□ -1.33
CTDSPL2-207ENST00000559738 KLHL25Q9H0H3 589 aa6.77□□□□□ -1.33
CTDSPL2-207ENST00000559738 AP5S1Q9NUS5 200 aa6.77□□□□□ -1.33
CTDSPL2-207ENST00000559738 ERVK13-1Q9NX77 482 aa6.77□□□□□ -1.33
CTDSPL2-207ENST00000559738 SUSD2Q9UGT4 822 aa6.77□□□□□ -1.33
CTDSPL2-207ENST00000559738 YBX2Q9Y2T7 364 aaKnown RBP6.77□□□□□ -1.33
CTDSPL2-207ENST00000559738 MRVI1Q9Y6F6 885 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms