RNA–Protein interactions for RNA: ENST00000559556.5

TPM1-220, Transcript of tropomyosin 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TPM1, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-220ENST00000559556 ZNF865P0CJ78 1059 aaPredicted RBP15.67■□□□□ 0.1
TPM1-220ENST00000559556 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.67■□□□□ 0.1
TPM1-220ENST00000559556 RNF180Q86T96 592 aa15.67■□□□□ 0.1
TPM1-220ENST00000559556 MSL3Q8N5Y2 521 aaKnown RBP15.67■□□□□ 0.1
TPM1-220ENST00000559556 GPATCH3Q96I76 525 aa15.67■□□□□ 0.1
TPM1-220ENST00000559556 NUP88Q99567 741 aaPredicted RBP15.67■□□□□ 0.1
TPM1-220ENST00000559556 TEX13BQ9BXU2 312 aa15.67■□□□□ 0.1
TPM1-220ENST00000559556 TANC1Q9C0D5 1861 aa15.67■□□□□ 0.1
TPM1-220ENST00000559556 SYNGAP1Q96PV0 1343 aa15.67■□□□□ 0.1
TPM1-220ENST00000559556 DNAJC25-GNG10A0A024R161 153 aa15.66■□□□□ 0.1
TPM1-220ENST00000559556 IGKV6D-41A0A0C4DH26 115 aa15.66■□□□□ 0.1
TPM1-220ENST00000559556 TRIM43BA6NCK2 446 aa15.66■□□□□ 0.1
TPM1-220ENST00000559556 ATP2A1O14983 1001 aa15.66■□□□□ 0.1
TPM1-220ENST00000559556 GPAA1O43292 621 aa15.66■□□□□ 0.1
TPM1-220ENST00000559556 RAD21O60216 631 aa15.66■□□□□ 0.1
TPM1-220ENST00000559556 NDUFB10O96000 172 aa15.66■□□□□ 0.1
TPM1-220ENST00000559556 ZFYP08048 801 aaPredicted RBP15.66■□□□□ 0.1
TPM1-220ENST00000559556 AKR1A1P14550 325 aa15.66■□□□□ 0.1
TPM1-220ENST00000559556 TAL1P17542 331 aaPredicted RBP15.66■□□□□ 0.1
TPM1-220ENST00000559556 SHHQ15465 462 aa15.66■□□□□ 0.1
TPM1-220ENST00000559556 C9orf50Q5SZB4 431 aa15.66■□□□□ 0.1
TPM1-220ENST00000559556 SNRNP48Q6IEG0 339 aaKnown RBP15.66■□□□□ 0.1
TPM1-220ENST00000559556 SH3RF1Q7Z6J0 888 aa15.66■□□□□ 0.1
TPM1-220ENST00000559556 PRPF38AQ8NAV1 312 aaKnown RBP15.66■□□□□ 0.1
TPM1-220ENST00000559556 BADQ92934 168 aa15.66■□□□□ 0.1
TPM1-220ENST00000559556 TRIM43Q96BQ3 446 aaPredicted RBP15.66■□□□□ 0.1
TPM1-220ENST00000559556 MKNK2Q9HBH9 465 aa15.66■□□□□ 0.1
TPM1-220ENST00000559556 A0A1W2PQ45 241 aaPredicted RBP15.65■□□□□ 0.1
TPM1-220ENST00000559556 A0A1W2PQY0 241 aa15.65■□□□□ 0.1
TPM1-220ENST00000559556 MINDY4BA8MYZ0 360 aa15.65■□□□□ 0.1
TPM1-220ENST00000559556 F5H6K3 240 aa15.65■□□□□ 0.1
TPM1-220ENST00000559556 RNF113AO15541 343 aaKnown RBP15.65■□□□□ 0.1
TPM1-220ENST00000559556 ADAMTS4O75173 837 aa15.65■□□□□ 0.1
TPM1-220ENST00000559556 PGK1P00558 417 aa15.65■□□□□ 0.1
TPM1-220ENST00000559556 GNAT2P19087 354 aa15.65■□□□□ 0.1
TPM1-220ENST00000559556 TLE2Q04725 743 aa15.65■□□□□ 0.1
TPM1-220ENST00000559556 KLRC3Q07444 240 aa15.65■□□□□ 0.1
TPM1-220ENST00000559556 ZNF697Q5TEC3 545 aa15.65■□□□□ 0.1
TPM1-220ENST00000559556 LENG1Q96BZ8 264 aaPredicted RBP15.65■□□□□ 0.1
TPM1-220ENST00000559556 DCTPP1Q9H773 170 aa15.65■□□□□ 0.1
TPM1-220ENST00000559556 SYNPO2Q9UMS6 1093 aa15.65■□□□□ 0.1
TPM1-220ENST00000559556 CNPY2Q9Y2B0 182 aa15.65■□□□□ 0.1
TPM1-220ENST00000559556 SCN10AQ9Y5Y9 1956 aa15.65■□□□□ 0.1
TPM1-220ENST00000559556 SYNRGQ9UMZ2 1314 aa15.65■□□□□ 0.1
TPM1-220ENST00000559556 CLTBP09497 229 aa15.64■□□□□ 0.09
TPM1-220ENST00000559556 TSHZ3Q63HK5 1081 aa15.64■□□□□ 0.09
TPM1-220ENST00000559556 MAMDC4Q6UXC1 1216 aa15.64■□□□□ 0.09
TPM1-220ENST00000559556 ZNF467Q7Z7K2 595 aaPredicted RBP15.64■□□□□ 0.09
TPM1-220ENST00000559556 STK11IPQ8N1F8 1099 aa15.64■□□□□ 0.09
TPM1-220ENST00000559556 MKL1Q969V6 931 aa15.64■□□□□ 0.09
TPM1-220ENST00000559556 TSEN34Q9BSV6 310 aaKnown RBP15.64■□□□□ 0.09
TPM1-220ENST00000559556 ZNF287Q9HBT7 754 aa15.64■□□□□ 0.09
TPM1-220ENST00000559556 RIPK3Q9Y572 518 aa15.64■□□□□ 0.09
TPM1-220ENST00000559556 TACC3Q9Y6A5 838 aa15.64■□□□□ 0.09
TPM1-220ENST00000559556 M0R2C6 588 aa15.63■□□□□ 0.09
TPM1-220ENST00000559556 KIAA0355O15063 1070 aa15.63■□□□□ 0.09
TPM1-220ENST00000559556 TDO2P48775 406 aa15.63■□□□□ 0.09
TPM1-220ENST00000559556 SMAD3P84022 425 aaKnown RBP15.63■□□□□ 0.09
TPM1-220ENST00000559556 CEP95Q96GE4 821 aa15.63■□□□□ 0.09
TPM1-220ENST00000559556 FAM161BQ96MY7 647 aa15.63■□□□□ 0.09
TPM1-220ENST00000559556 SLC38A10Q9HBR0 1119 aa15.63■□□□□ 0.09
TPM1-220ENST00000559556 MTMR4Q9NYA4 1195 aa15.63■□□□□ 0.09
TPM1-220ENST00000559556 CLIP2Q9UDT6 1046 aa15.63■□□□□ 0.09
TPM1-220ENST00000559556 PTPRSQ13332 1948 aa15.62■□□□□ 0.09
TPM1-220ENST00000559556 TET1Q8NFU7 2136 aa15.62■□□□□ 0.09
TPM1-220ENST00000559556 SNAI1O95863 264 aaPredicted RBP15.62■□□□□ 0.09
TPM1-220ENST00000559556 TTLL1O95922 423 aa15.62■□□□□ 0.09
TPM1-220ENST00000559556 ITGB8P26012 769 aa15.62■□□□□ 0.09
TPM1-220ENST00000559556 ACLYP53396 1101 aa15.62■□□□□ 0.09
TPM1-220ENST00000559556 OAZ1P54368 228 aa15.62■□□□□ 0.09
TPM1-220ENST00000559556 ANKRD33Q7Z3H0 272 aa15.62■□□□□ 0.09
TPM1-220ENST00000559556 GMCL1P1Q8NEA9 526 aa15.62■□□□□ 0.09
TPM1-220ENST00000559556 KLHDC9Q8NEP7 349 aa15.62■□□□□ 0.09
TPM1-220ENST00000559556 DDX11Q96FC9 970 aa15.62■□□□□ 0.09
TPM1-220ENST00000559556 FEM1BQ9UK73 627 aa15.62■□□□□ 0.09
TPM1-220ENST00000559556 TTC41PQ6P2S7 1318 aa15.62■□□□□ 0.09
TPM1-220ENST00000559556 MOXD2PA6NHM9 499 aa15.61■□□□□ 0.09
TPM1-220ENST00000559556 ZBED4O75132 1171 aa15.61■□□□□ 0.09
TPM1-220ENST00000559556 PRDM1O75626 825 aa15.61■□□□□ 0.09
TPM1-220ENST00000559556 CST5P28325 142 aaPredicted RBP15.61■□□□□ 0.09
TPM1-220ENST00000559556 LRRFIP1Q32MZ4 808 aaKnown RBP15.61■□□□□ 0.09
TPM1-220ENST00000559556 CCSAPQ6IQ19 270 aaPredicted RBP15.61■□□□□ 0.09
TPM1-220ENST00000559556 IFNL3Q8IZI9 196 aa15.61■□□□□ 0.09
TPM1-220ENST00000559556 ZNF444Q8N0Y2 327 aaPredicted RBP15.61■□□□□ 0.09
TPM1-220ENST00000559556 CPXCR1Q8N123 301 aa15.61■□□□□ 0.09
TPM1-220ENST00000559556 NUP133Q8WUM0 1156 aa15.61■□□□□ 0.09
TPM1-220ENST00000559556 KIFC2Q96AC6 838 aa15.61■□□□□ 0.09
TPM1-220ENST00000559556 FGD4Q96M96 766 aa15.61■□□□□ 0.09
TPM1-220ENST00000559556 TOX2Q96NM4 488 aa15.61■□□□□ 0.09
TPM1-220ENST00000559556 FBXO40Q9UH90 709 aa15.61■□□□□ 0.09
TPM1-220ENST00000559556 FAM184BQ9ULE4 1060 aa15.61■□□□□ 0.09
TPM1-220ENST00000559556 BRWD1Q9NSI6 2320 aa15.61■□□□□ 0.09
TPM1-220ENST00000559556 PATL2C9JE40 543 aaKnown RBP15.6■□□□□ 0.09
TPM1-220ENST00000559556 ADCY6O43306 1168 aa15.6■□□□□ 0.09
TPM1-220ENST00000559556 PQBP1O60828 265 aaKnown RBP15.6■□□□□ 0.09
TPM1-220ENST00000559556 DUSP11O75319 330 aaKnown RBP15.6■□□□□ 0.09
TPM1-220ENST00000559556 APPP05067 770 aa15.6■□□□□ 0.09
TPM1-220ENST00000559556 PHF6Q8IWS0 365 aaKnown RBP eCLIP15.6■□□□□ 0.09
TPM1-220ENST00000559556 LRRC47Q8N1G4 583 aaKnown RBP15.6■□□□□ 0.09
TPM1-220ENST00000559556 CHST13Q8NET6 341 aa15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms