RNA–Protein interactions for RNA: ENST00000559108.1

TPM1-217, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 437 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-217ENST00000559108 BRF1Q92994 677 aa12.76□□□□□ -0.37
TPM1-217ENST00000559108 SLF1Q9BQI6 1058 aa12.76□□□□□ -0.37
TPM1-217ENST00000559108 PAGR1Q9BTK6 254 aa12.76□□□□□ -0.37
TPM1-217ENST00000559108 UBA5Q9GZZ9 404 aa12.76□□□□□ -0.37
TPM1-217ENST00000559108 PORCNQ9H237 461 aa12.76□□□□□ -0.37
TPM1-217ENST00000559108 ZFYVE28Q9HCC9 887 aa12.76□□□□□ -0.37
TPM1-217ENST00000559108 MORF4L1Q9UBU8 362 aa12.76□□□□□ -0.37
TPM1-217ENST00000559108 ZNF214Q9UL59 606 aaPredicted RBP12.76□□□□□ -0.37
TPM1-217ENST00000559108 PRR12Q9ULL5 1215 aa12.76□□□□□ -0.37
TPM1-217ENST00000559108 KLF18A0A0U1RQI7 1052 aa12.75□□□□□ -0.37
TPM1-217ENST00000559108 VWA5AO00534 786 aa12.75□□□□□ -0.37
TPM1-217ENST00000559108 CD2BP2O95400 341 aaKnown RBP12.75□□□□□ -0.37
TPM1-217ENST00000559108 LARGE1O95461 756 aa12.75□□□□□ -0.37
TPM1-217ENST00000559108 ST3GAL1Q11201 340 aa12.75□□□□□ -0.37
TPM1-217ENST00000559108 CCDC178Q5BJE1 867 aa12.75□□□□□ -0.37
TPM1-217ENST00000559108 PPP4R3BQ5MIZ7 849 aa12.75□□□□□ -0.37
TPM1-217ENST00000559108 OTUD7BQ6GQQ9 843 aa12.75□□□□□ -0.37
TPM1-217ENST00000559108 MYPNQ86TC9 1320 aa12.75□□□□□ -0.37
TPM1-217ENST00000559108 FBXL16Q8N461 479 aa12.75□□□□□ -0.37
TPM1-217ENST00000559108 CD99L2Q8TCZ2 262 aa12.75□□□□□ -0.37
TPM1-217ENST00000559108 SMCR8Q8TEV9 937 aaPredicted RBP12.75□□□□□ -0.37
TPM1-217ENST00000559108 KIFC2Q96AC6 838 aa12.75□□□□□ -0.37
TPM1-217ENST00000559108 PLXNA1Q9UIW2 1896 aa12.75□□□□□ -0.37
TPM1-217ENST00000559108 ZNF236Q9UL36 1845 aa12.75□□□□□ -0.37
TPM1-217ENST00000559108 PNMA3Q9UL41 463 aa12.75□□□□□ -0.37
TPM1-217ENST00000559108 RIPK3Q9Y572 518 aa12.75□□□□□ -0.37
TPM1-217ENST00000559108 NID2Q14112 1375 aa12.74□□□□□ -0.37
TPM1-217ENST00000559108 PPP1R11O60927 126 aaPredicted RBP12.74□□□□□ -0.37
TPM1-217ENST00000559108 HMGB1P09429 215 aaKnown RBP12.74□□□□□ -0.37
TPM1-217ENST00000559108 PSMA5P28066 241 aa12.74□□□□□ -0.37
TPM1-217ENST00000559108 CDC27P30260 824 aa12.74□□□□□ -0.37
TPM1-217ENST00000559108 AK2P54819 239 aa12.74□□□□□ -0.37
TPM1-217ENST00000559108 EVCP57679 992 aa12.74□□□□□ -0.37
TPM1-217ENST00000559108 FUT2Q10981 343 aa12.74□□□□□ -0.37
TPM1-217ENST00000559108 PABPC4Q13310 644 aaKnown RBP eCLIP12.74□□□□□ -0.37
TPM1-217ENST00000559108 FAM110CQ1W6H9 321 aa12.74□□□□□ -0.37
TPM1-217ENST00000559108 MICU3Q86XE3 530 aa12.74□□□□□ -0.37
TPM1-217ENST00000559108 NUP133Q8WUM0 1156 aa12.74□□□□□ -0.37
TPM1-217ENST00000559108 FEM1BQ9UK73 627 aa12.74□□□□□ -0.37
TPM1-217ENST00000559108 CYP46A1Q9Y6A2 500 aa12.74□□□□□ -0.37
TPM1-217ENST00000559108 ERICH2A1L162 156 aa12.73□□□□□ -0.37
TPM1-217ENST00000559108 PLA2G6O60733 806 aa12.73□□□□□ -0.37
TPM1-217ENST00000559108 DDAH1O94760 285 aa12.73□□□□□ -0.37
TPM1-217ENST00000559108 PARP1P09874 1014 aaKnown RBP12.73□□□□□ -0.37
TPM1-217ENST00000559108 GCLCP48506 637 aaPredicted RBP12.73□□□□□ -0.37
TPM1-217ENST00000559108 STAT2P52630 851 aa12.73□□□□□ -0.37
TPM1-217ENST00000559108 ERVK-9P63128 1117 aa12.73□□□□□ -0.37
TPM1-217ENST00000559108 ERVK-24P63145 666 aa12.73□□□□□ -0.37
TPM1-217ENST00000559108 LACTBP83111 547 aaPredicted RBP12.73□□□□□ -0.37
TPM1-217ENST00000559108 SART3Q15020 963 aaKnown RBP12.73□□□□□ -0.37
TPM1-217ENST00000559108 NOM1Q5C9Z4 860 aaKnown RBP12.73□□□□□ -0.37
TPM1-217ENST00000559108 SYDE2Q5VT97 1194 aa12.73□□□□□ -0.37
TPM1-217ENST00000559108 NFXL1Q6ZNB6 911 aa12.73□□□□□ -0.37
TPM1-217ENST00000559108 SRBD1Q8N5C6 995 aaKnown RBP12.73□□□□□ -0.37
TPM1-217ENST00000559108 TRIM47Q96LD4 638 aa12.73□□□□□ -0.37
TPM1-217ENST00000559108 BEGAINQ9BUH8 593 aa12.73□□□□□ -0.37
TPM1-217ENST00000559108 MOV10L1Q9BXT6 1211 aaKnown RBP12.73□□□□□ -0.37
TPM1-217ENST00000559108 RANBP17Q9H2T7 1088 aaKnown RBP12.73□□□□□ -0.37
TPM1-217ENST00000559108 JMJD4Q9H9V9 463 aa12.73□□□□□ -0.37
TPM1-217ENST00000559108 EFCC1Q9HA90 598 aa12.73□□□□□ -0.37
TPM1-217ENST00000559108 SLC38A10Q9HBR0 1119 aa12.73□□□□□ -0.37
TPM1-217ENST00000559108 NCOA5Q9HCD5 579 aaKnown RBP12.73□□□□□ -0.37
TPM1-217ENST00000559108 RAVER2Q9HCJ3 691 aaKnown RBP12.73□□□□□ -0.37
TPM1-217ENST00000559108 PDRG1Q9NUG6 133 aa12.73□□□□□ -0.37
TPM1-217ENST00000559108 TPCN1Q9ULQ1 816 aa12.73□□□□□ -0.37
TPM1-217ENST00000559108 ISY1Q9ULR0 285 aaKnown RBP12.73□□□□□ -0.37
TPM1-217ENST00000559108 LRRC37A2A6NM11 1700 aa12.73□□□□□ -0.37
TPM1-217ENST00000559108 CNTNAP5Q8WYK1 1306 aa12.72□□□□□ -0.37
TPM1-217ENST00000559108 CCDC69A6NI79 296 aa12.72□□□□□ -0.37
TPM1-217ENST00000559108 GOLGA8BA8MQT2 603 aa12.72□□□□□ -0.37
TPM1-217ENST00000559108 KLRF2D3W0D1 207 aa12.72□□□□□ -0.37
TPM1-217ENST00000559108 PPFIA3O75145 1194 aa12.72□□□□□ -0.37
TPM1-217ENST00000559108 PDIA3P30101 505 aaKnown RBP12.72□□□□□ -0.37
TPM1-217ENST00000559108 CTCFP49711 727 aaPredicted RBP12.72□□□□□ -0.37
TPM1-217ENST00000559108 SP3Q02447 781 aa12.72□□□□□ -0.37
TPM1-217ENST00000559108 ASPRV1Q53RT3 343 aa12.72□□□□□ -0.37
TPM1-217ENST00000559108 NOL8Q76FK4 1167 aaKnown RBP12.72□□□□□ -0.37
TPM1-217ENST00000559108 CATIPQ7Z7H3 387 aa12.72□□□□□ -0.37
TPM1-217ENST00000559108 ADGRF4Q8IZF3 695 aa12.72□□□□□ -0.37
TPM1-217ENST00000559108 PRPF38AQ8NAV1 312 aaKnown RBP12.72□□□□□ -0.37
TPM1-217ENST00000559108 MTMR8Q96EF0 704 aa12.72□□□□□ -0.37
TPM1-217ENST00000559108 AGBL1Q96MI9 1066 aa12.72□□□□□ -0.37
TPM1-217ENST00000559108 SPATC1LQ9H0A9 340 aa12.72□□□□□ -0.37
TPM1-217ENST00000559108 RABGAP1Q9Y3P9 1069 aa12.72□□□□□ -0.37
TPM1-217ENST00000559108 SLC12A7Q9Y666 1083 aa12.72□□□□□ -0.37
TPM1-217ENST00000559108 hCG_1642624A0A1W2PR95 340 aa12.71□□□□□ -0.37
TPM1-217ENST00000559108 ZBTB43O43298 467 aa12.71□□□□□ -0.37
TPM1-217ENST00000559108 FKTNO75072 461 aa12.71□□□□□ -0.37
TPM1-217ENST00000559108 NEK4P51957 841 aa12.71□□□□□ -0.37
TPM1-217ENST00000559108 GPATCH4Q5T3I0 446 aaKnown RBP12.71□□□□□ -0.37
TPM1-217ENST00000559108 CCDC174Q6PII3 467 aa12.71□□□□□ -0.37
TPM1-217ENST00000559108 TMTC3Q6ZXV5 915 aa12.71□□□□□ -0.37
TPM1-217ENST00000559108 FAM160B2Q86V87 743 aa12.71□□□□□ -0.37
TPM1-217ENST00000559108 CPXCR1Q8N123 301 aa12.71□□□□□ -0.37
TPM1-217ENST00000559108 FANCBQ8NB91 859 aa12.71□□□□□ -0.37
TPM1-217ENST00000559108 GPRC5AQ8NFJ5 357 aa12.71□□□□□ -0.37
TPM1-217ENST00000559108 ALDH8A1Q9H2A2 487 aaPredicted RBP12.71□□□□□ -0.37
TPM1-217ENST00000559108 RIOX1Q9H6W3 641 aa12.71□□□□□ -0.37
TPM1-217ENST00000559108 HOXC10Q9NYD6 342 aa12.71□□□□□ -0.37
TPM1-217ENST00000559108 HTTP42858 3142 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms