RNA–Protein interactions for RNA: ENST00000558958.1

CLPX-203, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 1 (best)

Gene CLPX, Length 1,493 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-203ENST00000558958 SYDE2Q5VT97 1194 aa20.93■□□□□ 0.94
CLPX-203ENST00000558958 LARP1BQ659C4 914 aaKnown RBP20.93■□□□□ 0.94
CLPX-203ENST00000558958 FAM160B2Q86V87 743 aa20.93■□□□□ 0.94
CLPX-203ENST00000558958 PIBF1Q8WXW3 757 aa20.93■□□□□ 0.94
CLPX-203ENST00000558958 MTMR8Q96EF0 704 aa20.93■□□□□ 0.94
CLPX-203ENST00000558958 RRP36Q96EU6 259 aaKnown RBP20.93■□□□□ 0.94
CLPX-203ENST00000558958 AIFM3Q96NN9 605 aa20.93■□□□□ 0.94
CLPX-203ENST00000558958 PTPRFP10586 1907 aa20.93■□□□□ 0.94
CLPX-203ENST00000558958 SYT1P21579 422 aa20.92■□□□□ 0.94
CLPX-203ENST00000558958 SNAPC2Q13487 334 aa20.92■□□□□ 0.94
CLPX-203ENST00000558958 PFKFB3Q16875 520 aaPredicted RBP20.92■□□□□ 0.94
CLPX-203ENST00000558958 PROCA1Q8NCQ7 364 aaPredicted RBP20.92■□□□□ 0.94
CLPX-203ENST00000558958 PIGSQ96S52 555 aa20.92■□□□□ 0.94
CLPX-203ENST00000558958 ALG1Q9BT22 464 aa20.92■□□□□ 0.94
CLPX-203ENST00000558958 TANGO6Q9C0B7 1094 aa20.92■□□□□ 0.94
CLPX-203ENST00000558958 FBXO28Q9NVF7 368 aa20.92■□□□□ 0.94
CLPX-203ENST00000558958 CIZ1Q9ULV3 898 aaPredicted RBP20.92■□□□□ 0.94
CLPX-203ENST00000558958 TLL2Q9Y6L7 1015 aa20.92■□□□□ 0.94
CLPX-203ENST00000558958 TMEM88BA6NKF7 163 aa20.91■□□□□ 0.94
CLPX-203ENST00000558958 ZBTB48P10074 688 aaPredicted RBP20.91■□□□□ 0.94
CLPX-203ENST00000558958 SCG2P13521 617 aa20.91■□□□□ 0.94
CLPX-203ENST00000558958 SPRYD7Q5W111 196 aa20.91■□□□□ 0.94
CLPX-203ENST00000558958 PRR12Q9ULL5 1215 aa20.91■□□□□ 0.94
CLPX-203ENST00000558958 MOGSQ13724 837 aa20.9■□□□□ 0.94
CLPX-203ENST00000558958 HOMER1Q86YM7 354 aa20.9■□□□□ 0.94
CLPX-203ENST00000558958 SEC63Q9UGP8 760 aaKnown RBP20.9■□□□□ 0.94
CLPX-203ENST00000558958 LOC285556D6RIA3 1793 aa20.89■□□□□ 0.94
CLPX-203ENST00000558958 PNMA6FA0A0J9YX94 578 aa20.89■□□□□ 0.94
CLPX-203ENST00000558958 ZBTB5O15062 677 aa20.89■□□□□ 0.94
CLPX-203ENST00000558958 STX6O43752 255 aa20.89■□□□□ 0.94
CLPX-203ENST00000558958 PDIA4P13667 645 aaKnown RBP20.89■□□□□ 0.94
CLPX-203ENST00000558958 ZNF157P51786 506 aaPredicted RBP20.89■□□□□ 0.94
CLPX-203ENST00000558958 PKP1Q13835 747 aa20.89■□□□□ 0.94
CLPX-203ENST00000558958 TREML2Q5T2D2 321 aa20.89■□□□□ 0.94
CLPX-203ENST00000558958 RGMBQ6NW40 437 aa20.89■□□□□ 0.94
CLPX-203ENST00000558958 GADL1Q6ZQY3 521 aa20.89■□□□□ 0.94
CLPX-203ENST00000558958 CATSPERGQ6ZRH7 1159 aa20.89■□□□□ 0.94
CLPX-203ENST00000558958 FASTKD5Q7L8L6 764 aaKnown RBP20.89■□□□□ 0.94
CLPX-203ENST00000558958 PRPF38AQ8NAV1 312 aaKnown RBP20.89■□□□□ 0.94
CLPX-203ENST00000558958 KIFC2Q96AC6 838 aa20.89■□□□□ 0.94
CLPX-203ENST00000558958 C8orf76Q96K31 380 aa20.89■□□□□ 0.94
CLPX-203ENST00000558958 SLF1Q9BQI6 1058 aa20.89■□□□□ 0.94
CLPX-203ENST00000558958 CHMP5Q9NZZ3 219 aa20.89■□□□□ 0.94
CLPX-203ENST00000558958 MYH6P13533 1939 aa20.89■□□□□ 0.93
CLPX-203ENST00000558958 USP17L15C9J2P7 530 aa20.88■□□□□ 0.93
CLPX-203ENST00000558958 USP17L13C9JLJ4 530 aa20.88■□□□□ 0.93
CLPX-203ENST00000558958 USP17L11C9JVI0 530 aa20.88■□□□□ 0.93
CLPX-203ENST00000558958 USP17L18D6R9N7 530 aa20.88■□□□□ 0.93
CLPX-203ENST00000558958 USP17L22D6RA61 530 aa20.88■□□□□ 0.93
CLPX-203ENST00000558958 USP17L17D6RBQ6 530 aa20.88■□□□□ 0.93
CLPX-203ENST00000558958 USP17L19D6RCP7 530 aa20.88■□□□□ 0.93
CLPX-203ENST00000558958 USP17L20D6RJB6 530 aa20.88■□□□□ 0.93
CLPX-203ENST00000558958 FLOT1O75955 427 aa20.88■□□□□ 0.93
CLPX-203ENST00000558958 GTF2A2P52657 109 aa20.88■□□□□ 0.93
CLPX-203ENST00000558958 FOSBP53539 338 aa20.88■□□□□ 0.93
CLPX-203ENST00000558958 USP17L24Q0WX57 530 aa20.88■□□□□ 0.93
CLPX-203ENST00000558958 RASAL3Q86YV0 1011 aa20.88■□□□□ 0.93
CLPX-203ENST00000558958 RGS22Q8NE09 1264 aa20.88■□□□□ 0.93
CLPX-203ENST00000558958 FBXO18Q8NFZ0 1043 aa20.88■□□□□ 0.93
CLPX-203ENST00000558958 MS4A4AQ96JQ5 239 aa20.88■□□□□ 0.93
CLPX-203ENST00000558958 PPP1R9AQ9ULJ8 1098 aa20.88■□□□□ 0.93
CLPX-203ENST00000558958 HOXA7P31268 230 aaPredicted RBP20.88■□□□□ 0.93
CLPX-203ENST00000558958 CDC37Q16543 378 aaPredicted RBP20.88■□□□□ 0.93
CLPX-203ENST00000558958 QRICH1Q2TAL8 776 aa20.88■□□□□ 0.93
CLPX-203ENST00000558958 SHISA4Q96DD7 197 aa20.88■□□□□ 0.93
CLPX-203ENST00000558958 RANBP17Q9H2T7 1088 aaKnown RBP20.88■□□□□ 0.93
CLPX-203ENST00000558958 GJB4Q9NTQ9 266 aa20.88■□□□□ 0.93
CLPX-203ENST00000558958 ABT1Q9ULW3 272 aaKnown RBP20.88■□□□□ 0.93
CLPX-203ENST00000558958 AGTPBP1Q9UPW5 1226 aa20.88■□□□□ 0.93
CLPX-203ENST00000558958 CETPP11597 493 aa20.87■□□□□ 0.93
CLPX-203ENST00000558958 NUCB2P80303 420 aa20.87■□□□□ 0.93
CLPX-203ENST00000558958 MKRN3Q13064 507 aaKnown RBP20.87■□□□□ 0.93
CLPX-203ENST00000558958 COG2Q14746 738 aa20.87■□□□□ 0.93
CLPX-203ENST00000558958 WWC2Q6AWC2 1192 aa20.87■□□□□ 0.93
CLPX-203ENST00000558958 GPKOWQ92917 476 aaPredicted RBP eCLIP20.87■□□□□ 0.93
CLPX-203ENST00000558958 HHIPL1Q96JK4 782 aa20.87■□□□□ 0.93
CLPX-203ENST00000558958 BARHL2Q9NY43 387 aa20.87■□□□□ 0.93
CLPX-203ENST00000558958 VPS54Q9P1Q0 977 aa20.87■□□□□ 0.93
CLPX-203ENST00000558958 MTMR6Q9Y217 621 aa20.87■□□□□ 0.93
CLPX-203ENST00000558958 ZDHHC9Q9Y397 364 aa20.87■□□□□ 0.93
CLPX-203ENST00000558958 VPS37CA5D8V6 355 aaPredicted RBP20.86■□□□□ 0.93
CLPX-203ENST00000558958 H3BQV1 296 aa20.86■□□□□ 0.93
CLPX-203ENST00000558958 hCG_1984214I3L0E3 225 aa20.86■□□□□ 0.93
CLPX-203ENST00000558958 PPP1R11O60927 126 aaPredicted RBP20.86■□□□□ 0.93
CLPX-203ENST00000558958 XBP1P17861 261 aa20.86■□□□□ 0.93
CLPX-203ENST00000558958 SNAP25P60880 206 aa20.86■□□□□ 0.93
CLPX-203ENST00000558958 IFFO2Q5TF58 517 aa20.86■□□□□ 0.93
CLPX-203ENST00000558958 KRT40Q6A162 431 aa20.86■□□□□ 0.93
CLPX-203ENST00000558958 OTUD7BQ6GQQ9 843 aa20.86■□□□□ 0.93
CLPX-203ENST00000558958 GPAT2Q6NUI2 795 aa20.86■□□□□ 0.93
CLPX-203ENST00000558958 SAMD1Q6SPF0 538 aaPredicted RBP20.86■□□□□ 0.93
CLPX-203ENST00000558958 HEATR3Q7Z4Q2 680 aa20.86■□□□□ 0.93
CLPX-203ENST00000558958 ZNF713Q8N859 430 aaPredicted RBP20.86■□□□□ 0.93
CLPX-203ENST00000558958 SH3GLB2Q9NR46 395 aa20.86■□□□□ 0.93
CLPX-203ENST00000558958 MYPNQ86TC9 1320 aa20.85■□□□□ 0.93
CLPX-203ENST00000558958 WDR33Q9C0J8 1336 aaKnown RBP20.85■□□□□ 0.93
CLPX-203ENST00000558958 STXBP3O00186 592 aa20.85■□□□□ 0.93
CLPX-203ENST00000558958 BRD1O95696 1058 aa20.85■□□□□ 0.93
CLPX-203ENST00000558958 SLC10A3P09131 477 aa20.85■□□□□ 0.93
CLPX-203ENST00000558958 DSG3P32926 999 aa20.85■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 161.9 ms