RNA–Protein interactions for RNA: ENST00000558890.5

LRRC28-211, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 978 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-211ENST00000558890 TAF6LQ9Y6J9 622 aa8.89□□□□□ -0.99
LRRC28-211ENST00000558890 B4E1Z4 1266 aa8.88□□□□□ -0.99
LRRC28-211ENST00000558890 C19orf81C9J6K1 198 aa8.88□□□□□ -0.99
LRRC28-211ENST00000558890 RANBP6O60518 1105 aaKnown RBP8.88□□□□□ -0.99
LRRC28-211ENST00000558890 PFKFB2O60825 505 aa8.88□□□□□ -0.99
LRRC28-211ENST00000558890 DDAH1O94760 285 aa8.88□□□□□ -0.99
LRRC28-211ENST00000558890 TOP1P11387 765 aaKnown RBP8.88□□□□□ -0.99
LRRC28-211ENST00000558890 MSNP26038 577 aaKnown RBP8.88□□□□□ -0.99
LRRC28-211ENST00000558890 HOXA7P31268 230 aaPredicted RBP8.88□□□□□ -0.99
LRRC28-211ENST00000558890 USP14P54578 494 aa8.88□□□□□ -0.99
LRRC28-211ENST00000558890 TFAP4Q01664 338 aa8.88□□□□□ -0.99
LRRC28-211ENST00000558890 UVSSAQ2YD98 709 aa8.88□□□□□ -0.99
LRRC28-211ENST00000558890 TREML2Q5T2D2 321 aa8.88□□□□□ -0.99
LRRC28-211ENST00000558890 COL13A1Q5TAT6 717 aaPredicted RBP8.88□□□□□ -0.99
LRRC28-211ENST00000558890 C17orf99Q6UX52 265 aa8.88□□□□□ -0.99
LRRC28-211ENST00000558890 GMCL1P1Q8NEA9 526 aa8.88□□□□□ -0.99
LRRC28-211ENST00000558890 LPAR1Q92633 364 aa8.88□□□□□ -0.99
LRRC28-211ENST00000558890 C12orf42Q96LP6 360 aa8.88□□□□□ -0.99
LRRC28-211ENST00000558890 ZSCAN10Q96SZ4 725 aaPredicted RBP8.88□□□□□ -0.99
LRRC28-211ENST00000558890 KIAA1683Q9H0B3 1180 aa8.88□□□□□ -0.99
LRRC28-211ENST00000558890 ZSCAN16Q9H4T2 348 aaPredicted RBP8.88□□□□□ -0.99
LRRC28-211ENST00000558890 ARHGEF10LQ9HCE6 1279 aa8.88□□□□□ -0.99
LRRC28-211ENST00000558890 SLC45A1Q9Y2W3 748 aa8.88□□□□□ -0.99
LRRC28-211ENST00000558890 TMX2Q9Y320 296 aa8.88□□□□□ -0.99
LRRC28-211ENST00000558890 PARP14Q460N5 1801 aa8.88□□□□□ -0.99
LRRC28-211ENST00000558890 TNKSO95271 1327 aa8.87□□□□□ -0.99
LRRC28-211ENST00000558890 CASP8AP2Q9UKL3 1982 aa8.87□□□□□ -0.99
LRRC28-211ENST00000558890 TRIM75PA6NK02 468 aa8.87□□□□□ -0.99
LRRC28-211ENST00000558890 USP17L10C9JJH3 530 aa8.87□□□□□ -0.99
LRRC28-211ENST00000558890 GPR25O00155 361 aa8.87□□□□□ -0.99
LRRC28-211ENST00000558890 SH2B2O14492 632 aaPredicted RBP8.87□□□□□ -0.99
LRRC28-211ENST00000558890 PRC1O43663 620 aa8.87□□□□□ -0.99
LRRC28-211ENST00000558890 PLA2G6O60733 806 aa8.87□□□□□ -0.99
LRRC28-211ENST00000558890 PRDM1O75626 825 aa8.87□□□□□ -0.99
LRRC28-211ENST00000558890 ALDH1A1P00352 501 aa8.87□□□□□ -0.99
LRRC28-211ENST00000558890 SMARCA1P28370 1054 aa8.87□□□□□ -0.99
LRRC28-211ENST00000558890 HMGCS2P54868 508 aa8.87□□□□□ -0.99
LRRC28-211ENST00000558890 ANTXR2P58335 489 aa8.87□□□□□ -0.99
LRRC28-211ENST00000558890 ICA1Q05084 483 aa8.87□□□□□ -0.99
LRRC28-211ENST00000558890 CRHR2Q13324 411 aa8.87□□□□□ -0.99
LRRC28-211ENST00000558890 FERMT3Q86UX7 667 aa8.87□□□□□ -0.99
LRRC28-211ENST00000558890 ZSCAN30Q86W11 494 aa8.87□□□□□ -0.99
LRRC28-211ENST00000558890 TEX2Q8IWB9 1127 aa8.87□□□□□ -0.99
LRRC28-211ENST00000558890 FAM177A1Q8N128 213 aaPredicted RBP8.87□□□□□ -0.99
LRRC28-211ENST00000558890 ENAHQ8N8S7 591 aaPredicted RBP8.87□□□□□ -0.99
LRRC28-211ENST00000558890 PROCA1Q8NCQ7 364 aaPredicted RBP8.87□□□□□ -0.99
LRRC28-211ENST00000558890 RNF214Q8ND24 703 aa8.87□□□□□ -0.99
LRRC28-211ENST00000558890 IGDCC4Q8TDY8 1250 aa8.87□□□□□ -0.99
LRRC28-211ENST00000558890 ZNF274Q96GC6 653 aaPredicted RBP8.87□□□□□ -0.99
LRRC28-211ENST00000558890 GMCL1Q96IK5 515 aa8.87□□□□□ -0.99
LRRC28-211ENST00000558890 SPATA32Q96LK8 384 aa8.87□□□□□ -0.99
LRRC28-211ENST00000558890 IL17RBQ9NRM6 502 aa8.87□□□□□ -0.99
LRRC28-211ENST00000558890 CCDC39Q9UFE4 941 aa8.87□□□□□ -0.99
LRRC28-211ENST00000558890 NAP1L2Q9ULW6 460 aaPredicted RBP8.87□□□□□ -0.99
LRRC28-211ENST00000558890 CENPFP49454 3210 aa8.86□□□□□ -0.99
LRRC28-211ENST00000558890 MYPNQ86TC9 1320 aa8.86□□□□□ -0.99
LRRC28-211ENST00000558890 A0A0G2JMZ2 1700 aa8.86□□□□□ -0.99
LRRC28-211ENST00000558890 CCDC196A0A1B0GTZ2 297 aa8.86□□□□□ -0.99
LRRC28-211ENST00000558890 PTPDC1A2A3K4 754 aa8.86□□□□□ -0.99
LRRC28-211ENST00000558890 PDHXO00330 501 aa8.86□□□□□ -0.99
LRRC28-211ENST00000558890 IFIT3O14879 490 aaKnown RBP8.86□□□□□ -0.99
LRRC28-211ENST00000558890 DHX16O60231 1041 aaKnown RBP8.86□□□□□ -0.99
LRRC28-211ENST00000558890 TLR2O60603 784 aa8.86□□□□□ -0.99
LRRC28-211ENST00000558890 JAK2O60674 1132 aa8.86□□□□□ -0.99
LRRC28-211ENST00000558890 PTMAP06454 111 aaKnown RBP8.86□□□□□ -0.99
LRRC28-211ENST00000558890 SNHG28P0DPA3 235 aa8.86□□□□□ -0.99
LRRC28-211ENST00000558890 BCRP11274 1271 aa8.86□□□□□ -0.99
LRRC28-211ENST00000558890 CTGFP29279 349 aa8.86□□□□□ -0.99
LRRC28-211ENST00000558890 SCRN1Q12765 414 aa8.86□□□□□ -0.99
LRRC28-211ENST00000558890 RESTQ13127 1097 aa8.86□□□□□ -0.99
LRRC28-211ENST00000558890 MTMR2Q13614 643 aa8.86□□□□□ -0.99
LRRC28-211ENST00000558890 WTAPQ15007 396 aa8.86□□□□□ -0.99
LRRC28-211ENST00000558890 GPATCH4Q5T3I0 446 aaKnown RBP8.86□□□□□ -0.99
LRRC28-211ENST00000558890 IFIT1BQ5T764 474 aaKnown RBP8.86□□□□□ -0.99
LRRC28-211ENST00000558890 CYB5R4Q7L1T6 521 aa8.86□□□□□ -0.99
LRRC28-211ENST00000558890 FASTKD5Q7L8L6 764 aaKnown RBP8.86□□□□□ -0.99
LRRC28-211ENST00000558890 CLEC10AQ8IUN9 316 aa8.86□□□□□ -0.99
LRRC28-211ENST00000558890 PLCD3Q8N3E9 789 aa8.86□□□□□ -0.99
LRRC28-211ENST00000558890 RGS22Q8NE09 1264 aa8.86□□□□□ -0.99
LRRC28-211ENST00000558890 SMARCC2Q8TAQ2 1214 aa8.86□□□□□ -0.99
LRRC28-211ENST00000558890 ZNF296Q8WUU4 475 aaPredicted RBP8.86□□□□□ -0.99
LRRC28-211ENST00000558890 CEP95Q96GE4 821 aa8.86□□□□□ -0.99
LRRC28-211ENST00000558890 PDLIM2Q96JY6 352 aa8.86□□□□□ -0.99
LRRC28-211ENST00000558890 ZNF396Q96N95 335 aaPredicted RBP8.86□□□□□ -0.99
LRRC28-211ENST00000558890 NUP62CLQ9H1M0 184 aa8.86□□□□□ -0.99
LRRC28-211ENST00000558890 LY9Q9HBG7 655 aa8.86□□□□□ -0.99
LRRC28-211ENST00000558890 GOPCQ9HD26 462 aa8.86□□□□□ -0.99
LRRC28-211ENST00000558890 TOMM22Q9NS69 142 aa8.86□□□□□ -0.99
LRRC28-211ENST00000558890 DDX19AQ9NUU7 478 aaKnown RBP8.86□□□□□ -0.99
LRRC28-211ENST00000558890 CFAP45Q9UL16 551 aa8.86□□□□□ -0.99
LRRC28-211ENST00000558890 AGTPBP1Q9UPW5 1226 aa8.86□□□□□ -0.99
LRRC28-211ENST00000558890 CCDC192P0DO97 292 aa8.85□□□□□ -0.99
LRRC28-211ENST00000558890 FDX1P10109 184 aa8.85□□□□□ -0.99
LRRC28-211ENST00000558890 CYP2C8P10632 490 aa8.85□□□□□ -0.99
LRRC28-211ENST00000558890 EEF2P13639 858 aaKnown RBP8.85□□□□□ -0.99
LRRC28-211ENST00000558890 GNAQP50148 359 aa8.85□□□□□ -0.99
LRRC28-211ENST00000558890 APOBRQ0VD83 1088 aa8.85□□□□□ -0.99
LRRC28-211ENST00000558890 COL9A3Q14050 684 aaPredicted RBP8.85□□□□□ -0.99
LRRC28-211ENST00000558890 TPRNQ4KMQ1 711 aa8.85□□□□□ -0.99
LRRC28-211ENST00000558890 ASPRV1Q53RT3 343 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms