RNA–Protein interactions for RNA: ENST00000558867.1

CDC42BPB-203, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 635 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-203ENST00000558867 EYSQ5T1H1 3165 aa19.17■□□□□ 0.66
CDC42BPB-203ENST00000558867 USP17L12C9JPN9 530 aa19.17■□□□□ 0.66
CDC42BPB-203ENST00000558867 USP17L21D6R901 530 aa19.17■□□□□ 0.66
CDC42BPB-203ENST00000558867 TIMP1P01033 207 aa19.17■□□□□ 0.66
CDC42BPB-203ENST00000558867 ITGB8P26012 769 aa19.17■□□□□ 0.66
CDC42BPB-203ENST00000558867 ADD2P35612 726 aa19.17■□□□□ 0.66
CDC42BPB-203ENST00000558867 EVX2Q03828 476 aa19.17■□□□□ 0.66
CDC42BPB-203ENST00000558867 FAAP100Q0VG06 881 aa19.17■□□□□ 0.66
CDC42BPB-203ENST00000558867 PPIGQ13427 754 aaKnown RBP eCLIP19.17■□□□□ 0.664e-7■□□□□ 11.3
CDC42BPB-203ENST00000558867 CLEC10AQ8IUN9 316 aa19.17■□□□□ 0.66
CDC42BPB-203ENST00000558867 VTI1AQ96AJ9 217 aa19.17■□□□□ 0.66
CDC42BPB-203ENST00000558867 GAS2L1Q99501 681 aaPredicted RBP19.17■□□□□ 0.66
CDC42BPB-203ENST00000558867 TEX13BQ9BXU2 312 aa19.17■□□□□ 0.66
CDC42BPB-203ENST00000558867 APBB1O00213 710 aa19.16■□□□□ 0.66
CDC42BPB-203ENST00000558867 RAB11FIP3O75154 756 aa19.16■□□□□ 0.66
CDC42BPB-203ENST00000558867 ADAMTS4O75173 837 aa19.16■□□□□ 0.66
CDC42BPB-203ENST00000558867 TAL1P17542 331 aaPredicted RBP19.16■□□□□ 0.66
CDC42BPB-203ENST00000558867 RPAP2Q8IXW5 612 aaPredicted RBP19.16■□□□□ 0.66
CDC42BPB-203ENST00000558867 TIFAQ96CG3 184 aa19.16■□□□□ 0.66
CDC42BPB-203ENST00000558867 SLF1Q9BQI6 1058 aa19.16■□□□□ 0.66
CDC42BPB-203ENST00000558867 BCL11AQ9H165 835 aa19.16■□□□□ 0.66
CDC42BPB-203ENST00000558867 ZNF576Q9H609 170 aa19.16■□□□□ 0.66
CDC42BPB-203ENST00000558867 FBXO28Q9NVF7 368 aa19.16■□□□□ 0.66
CDC42BPB-203ENST00000558867 ZHX1Q9UKY1 873 aaPredicted RBP19.16■□□□□ 0.66
CDC42BPB-203ENST00000558867 ZNF214Q9UL59 606 aaPredicted RBP19.16■□□□□ 0.66
CDC42BPB-203ENST00000558867 ELP1O95163 1332 aa19.16■□□□□ 0.66
CDC42BPB-203ENST00000558867 PRUNE2Q8WUY3 3088 aa19.16■□□□□ 0.66
CDC42BPB-203ENST00000558867 PRKAB2O43741 272 aa19.15■□□□□ 0.66
CDC42BPB-203ENST00000558867 DUSP11O75319 330 aaKnown RBP19.15■□□□□ 0.66
CDC42BPB-203ENST00000558867 EPHB4P54760 987 aa19.15■□□□□ 0.66
CDC42BPB-203ENST00000558867 GRIN2CQ14957 1233 aa19.15■□□□□ 0.66
CDC42BPB-203ENST00000558867 KCNA10Q16322 511 aa19.15■□□□□ 0.66
CDC42BPB-203ENST00000558867 FAM83BQ5T0W9 1011 aa19.15■□□□□ 0.66
CDC42BPB-203ENST00000558867 MFSD5Q6N075 450 aa19.15■□□□□ 0.66
CDC42BPB-203ENST00000558867 CCDC129Q6ZRS4 1044 aa19.15■□□□□ 0.66
CDC42BPB-203ENST00000558867 TMEM199Q8N511 208 aa19.15■□□□□ 0.66
CDC42BPB-203ENST00000558867 SLC4A4Q9Y6R1 1079 aa19.15■□□□□ 0.66
CDC42BPB-203ENST00000558867 SYNRGQ9UMZ2 1314 aa19.15■□□□□ 0.66
CDC42BPB-203ENST00000558867 PLXNA1Q9UIW2 1896 aa19.15■□□□□ 0.66
CDC42BPB-203ENST00000558867 TTC28Q96AY4 2481 aa19.15■□□□□ 0.66
CDC42BPB-203ENST00000558867 TLR3O15455 904 aaKnown RBP19.14■□□□□ 0.65
CDC42BPB-203ENST00000558867 ZBED4O75132 1171 aa19.14■□□□□ 0.65
CDC42BPB-203ENST00000558867 UBE3CQ15386 1083 aa19.14■□□□□ 0.65
CDC42BPB-203ENST00000558867 SNRNP48Q6IEG0 339 aaKnown RBP19.14■□□□□ 0.65
CDC42BPB-203ENST00000558867 MAMDC4Q6UXC1 1216 aa19.14■□□□□ 0.65
CDC42BPB-203ENST00000558867 PRPF38AQ8NAV1 312 aaKnown RBP19.14■□□□□ 0.65
CDC42BPB-203ENST00000558867 KLHDC9Q8NEP7 349 aa19.14■□□□□ 0.65
CDC42BPB-203ENST00000558867 BOLA2Q9H3K6 86 aa19.14■□□□□ 0.65
CDC42BPB-203ENST00000558867 ZBTB40Q9NUA8 1239 aa19.14■□□□□ 0.65
CDC42BPB-203ENST00000558867 ARPP21Q9UBL0 812 aaPredicted RBP19.14■□□□□ 0.65
CDC42BPB-203ENST00000558867 COL11A1P12107 1806 aaPredicted RBP19.14■□□□□ 0.65
CDC42BPB-203ENST00000558867 C6orf222P0C671 652 aaPredicted RBP19.13■□□□□ 0.65
CDC42BPB-203ENST00000558867 ATP5JP18859 108 aa19.13■□□□□ 0.65
CDC42BPB-203ENST00000558867 ZNF467Q7Z7K2 595 aaPredicted RBP19.13■□□□□ 0.65
CDC42BPB-203ENST00000558867 MTIF3Q9H2K0 278 aaKnown RBP19.13■□□□□ 0.65
CDC42BPB-203ENST00000558867 ABHD16BQ9H3Z7 469 aa19.13■□□□□ 0.65
CDC42BPB-203ENST00000558867 MKNK2Q9HBH9 465 aa19.13■□□□□ 0.65
CDC42BPB-203ENST00000558867 FBXO40Q9UH90 709 aa19.13■□□□□ 0.65
CDC42BPB-203ENST00000558867 PARP14Q460N5 1801 aa19.13■□□□□ 0.65
CDC42BPB-203ENST00000558867 CYP2D7A0A087X1C5 515 aa19.12■□□□□ 0.65
CDC42BPB-203ENST00000558867 A0A0U1RQG5 324 aaPredicted RBP19.12■□□□□ 0.65
CDC42BPB-203ENST00000558867 TNFRSF10AO00220 468 aa19.12■□□□□ 0.65
CDC42BPB-203ENST00000558867 CST5P28325 142 aaPredicted RBP19.12■□□□□ 0.65
CDC42BPB-203ENST00000558867 SLC4A3P48751 1232 aa19.12■□□□□ 0.65
CDC42BPB-203ENST00000558867 ACVR2BQ13705 512 aa19.12■□□□□ 0.65
CDC42BPB-203ENST00000558867 PSRC1Q6PGN9 363 aaPredicted RBP19.12■□□□□ 0.65
CDC42BPB-203ENST00000558867 ANKRD35Q8N283 1001 aa19.12■□□□□ 0.65
CDC42BPB-203ENST00000558867 REPS2Q8NFH8 660 aa19.12■□□□□ 0.65
CDC42BPB-203ENST00000558867 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.12■□□□□ 0.651e-10■■■■■ 27.7
CDC42BPB-203ENST00000558867 ZNF287Q9HBT7 754 aa19.12■□□□□ 0.65
CDC42BPB-203ENST00000558867 BAZ2AQ9UIF9 1905 aaKnown RBP19.12■□□□□ 0.65
CDC42BPB-203ENST00000558867 CTR9Q6PD62 1173 aa19.11■□□□□ 0.65
CDC42BPB-203ENST00000558867 IL27Q8NEV9 243 aa19.11■□□□□ 0.65
CDC42BPB-203ENST00000558867 LENG1Q96BZ8 264 aaPredicted RBP19.11■□□□□ 0.65
CDC42BPB-203ENST00000558867 HAUS7Q99871 368 aa19.11■□□□□ 0.65
CDC42BPB-203ENST00000558867 NYAP2Q9P242 653 aa19.11■□□□□ 0.65
CDC42BPB-203ENST00000558867 MSRAQ9UJ68 235 aa19.11■□□□□ 0.65
CDC42BPB-203ENST00000558867 TBX21Q9UL17 535 aa19.11■□□□□ 0.65
CDC42BPB-203ENST00000558867 SPTBN5Q9NRC6 3674 aaKnown RBP19.11■□□□□ 0.65
CDC42BPB-203ENST00000558867 CDH23Q9H251 3354 aa19.11■□□□□ 0.65
CDC42BPB-203ENST00000558867 F5H6K3 240 aa19.1■□□□□ 0.65
CDC42BPB-203ENST00000558867 ARVCFO00192 962 aa19.1■□□□□ 0.65
CDC42BPB-203ENST00000558867 ATP2A1O14983 1001 aa19.1■□□□□ 0.65
CDC42BPB-203ENST00000558867 SNAI1O95863 264 aaPredicted RBP19.1■□□□□ 0.65
CDC42BPB-203ENST00000558867 ASGR1P07306 291 aa19.1■□□□□ 0.65
CDC42BPB-203ENST00000558867 KLRC3Q07444 240 aa19.1■□□□□ 0.65
CDC42BPB-203ENST00000558867 HDAC1Q13547 482 aaPredicted RBP19.1■□□□□ 0.65
CDC42BPB-203ENST00000558867 GNASQ5JWF2 1037 aa19.1■□□□□ 0.65
CDC42BPB-203ENST00000558867 CPXCR1Q8N123 301 aa19.1■□□□□ 0.65
CDC42BPB-203ENST00000558867 ATXN2LQ8WWM7 1075 aaKnown RBP19.1■□□□□ 0.65
CDC42BPB-203ENST00000558867 RWDD1Q9H446 243 aaPredicted RBP19.1■□□□□ 0.65
CDC42BPB-203ENST00000558867 CDKN2AIPQ9NXV6 580 aaPredicted RBP19.1■□□□□ 0.65
CDC42BPB-203ENST00000558867 PCDHB15Q9Y5E8 787 aa19.1■□□□□ 0.65
CDC42BPB-203ENST00000558867 DNAJC25-GNG10A0A024R161 153 aa19.09■□□□□ 0.65
CDC42BPB-203ENST00000558867 CDK7P50613 346 aa19.09■□□□□ 0.65
CDC42BPB-203ENST00000558867 RAB30Q15771 203 aa19.09■□□□□ 0.65
CDC42BPB-203ENST00000558867 AKNAD1Q5T1N1 836 aa19.09■□□□□ 0.65
CDC42BPB-203ENST00000558867 CCSAPQ6IQ19 270 aaPredicted RBP19.09■□□□□ 0.65
CDC42BPB-203ENST00000558867 CHST13Q8NET6 341 aa19.09■□□□□ 0.65
CDC42BPB-203ENST00000558867 TSHZ2Q9NRE2 1034 aa19.09■□□□□ 0.65
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