RNA–Protein interactions for RNA: ENST00000558611.1

MARK3-213, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 5

Gene MARK3, Length 687 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-213ENST00000558611 CEP135Q66GS9 1140 aa12.66□□□□□ -0.38
MARK3-213ENST00000558611 SLC16A10Q8TF71 515 aa12.66□□□□□ -0.38
MARK3-213ENST00000558611 PNNQ9H307 717 aaKnown RBP12.66□□□□□ -0.38
MARK3-213ENST00000558611 SPC25Q9HBM1 224 aa12.66□□□□□ -0.38
MARK3-213ENST00000558611 FANCLQ9NW38 375 aa12.66□□□□□ -0.38
MARK3-213ENST00000558611 DNAJB12Q9NXW2 375 aaKnown RBP12.66□□□□□ -0.38
MARK3-213ENST00000558611 SOX13Q9UN79 622 aa12.66□□□□□ -0.38
MARK3-213ENST00000558611 MAPK8IP1Q9UQF2 711 aa12.66□□□□□ -0.38
MARK3-213ENST00000558611 RAB11FIP3O75154 756 aa12.65□□□□□ -0.38
MARK3-213ENST00000558611 CLCQ05315 142 aa12.65□□□□□ -0.38
MARK3-213ENST00000558611 SLC39A6Q13433 755 aa12.65□□□□□ -0.38
MARK3-213ENST00000558611 ZNF423Q2M1K9 1284 aa12.65□□□□□ -0.38
MARK3-213ENST00000558611 ARSHQ5FYA8 562 aa12.65□□□□□ -0.38
MARK3-213ENST00000558611 GK5Q6ZS86 529 aa12.65□□□□□ -0.38
MARK3-213ENST00000558611 LSRQ86X29 649 aaPredicted RBP12.65□□□□□ -0.38
MARK3-213ENST00000558611 HOMER1Q86YM7 354 aa12.65□□□□□ -0.38
MARK3-213ENST00000558611 CCDC155Q8N6L0 562 aa12.65□□□□□ -0.38
MARK3-213ENST00000558611 FLAD1Q8NFF5 587 aa12.65□□□□□ -0.38
MARK3-213ENST00000558611 GAL3ST3Q96A11 431 aa12.65□□□□□ -0.38
MARK3-213ENST00000558611 ZNF837Q96EG3 531 aaPredicted RBP12.65□□□□□ -0.38
MARK3-213ENST00000558611 ST7Q9NRC1 585 aa12.65□□□□□ -0.38
MARK3-213ENST00000558611 COL4A3BPQ9Y5P4 624 aa12.65□□□□□ -0.38
MARK3-213ENST00000558611 KIF13BQ9NQT8 1826 aa12.65□□□□□ -0.39
MARK3-213ENST00000558611 CNTNAP4Q9C0A0 1308 aa12.64□□□□□ -0.39
MARK3-213ENST00000558611 MAPK8IP3Q9UPT6 1336 aa12.64□□□□□ -0.39
MARK3-213ENST00000558611 PPP1R12AO14974 1030 aaPredicted RBP12.64□□□□□ -0.39
MARK3-213ENST00000558611 HTATSF1O43719 755 aaKnown RBP12.64□□□□□ -0.39
MARK3-213ENST00000558611 EIF2AK2P19525 551 aaKnown RBP12.64□□□□□ -0.39
MARK3-213ENST00000558611 VN1R5Q7Z5H4 357 aa12.64□□□□□ -0.39
MARK3-213ENST00000558611 AMIGO3Q86WK7 504 aa12.64□□□□□ -0.39
MARK3-213ENST00000558611 COL23A1Q86Y22 540 aaPredicted RBP12.64□□□□□ -0.39
MARK3-213ENST00000558611 RTF1Q92541 710 aaKnown RBP12.64□□□□□ -0.39
MARK3-213ENST00000558611 UBE2OQ9C0C9 1292 aaKnown RBP12.64□□□□□ -0.39
MARK3-213ENST00000558611 ADAM19Q9H013 955 aa12.64□□□□□ -0.39
MARK3-213ENST00000558611 BCORQ6W2J9 1755 aa12.64□□□□□ -0.39
MARK3-213ENST00000558611 ATE1O95260 518 aa12.63□□□□□ -0.39
MARK3-213ENST00000558611 PTPRAP18433 802 aa12.63□□□□□ -0.39
MARK3-213ENST00000558611 RPL6Q02878 288 aaKnown RBP12.63□□□□□ -0.39
MARK3-213ENST00000558611 WDR43Q15061 677 aaKnown RBP eCLIP12.63□□□□□ -0.39
MARK3-213ENST00000558611 MCM10Q7L590 875 aa12.63□□□□□ -0.39
MARK3-213ENST00000558611 C19orf47Q8N9M1 422 aaKnown RBP12.63□□□□□ -0.39
MARK3-213ENST00000558611 TMEM260Q9NX78 707 aa12.63□□□□□ -0.39
MARK3-213ENST00000558611 PRR12Q9ULL5 1215 aa12.63□□□□□ -0.39
MARK3-213ENST00000558611 SCN7AQ01118 1682 aa12.63□□□□□ -0.39
MARK3-213ENST00000558611 RGS20O76081 388 aa12.62□□□□□ -0.39
MARK3-213ENST00000558611 ZNF252P-AS1Q0IIN9 211 aa12.62□□□□□ -0.39
MARK3-213ENST00000558611 KANK3Q6NY19 840 aa12.62□□□□□ -0.39
MARK3-213ENST00000558611 KIAA0907Q7Z7F0 614 aaPredicted RBP12.62□□□□□ -0.39
MARK3-213ENST00000558611 TTC5Q8N0Z6 440 aa12.62□□□□□ -0.39
MARK3-213ENST00000558611 STK35Q8TDR2 534 aa12.62□□□□□ -0.39
MARK3-213ENST00000558611 GTPBP3Q969Y2 492 aaKnown RBP12.62□□□□□ -0.39
MARK3-213ENST00000558611 KANSL2Q9H9L4 492 aa12.62□□□□□ -0.39
MARK3-213ENST00000558611 METTL14Q9HCE5 456 aaKnown RBP12.62□□□□□ -0.39
MARK3-213ENST00000558611 PCDH12Q9NPG4 1184 aa12.62□□□□□ -0.39
MARK3-213ENST00000558611 AFDNP55196 1824 aaKnown RBP12.62□□□□□ -0.39
MARK3-213ENST00000558611 SIN3BO75182 1162 aa12.61□□□□□ -0.39
MARK3-213ENST00000558611 CRKLP46109 303 aaKnown RBP12.61□□□□□ -0.39
MARK3-213ENST00000558611 DCTN1Q14203 1278 aa12.61□□□□□ -0.39
MARK3-213ENST00000558611 PKDCCQ504Y2 493 aa12.61□□□□□ -0.39
MARK3-213ENST00000558611 ZNF790Q6PG37 636 aa12.61□□□□□ -0.39
MARK3-213ENST00000558611 SYT9Q86SS6 491 aa12.61□□□□□ -0.39
MARK3-213ENST00000558611 GRIN3AQ8TCU5 1115 aa12.61□□□□□ -0.39
MARK3-213ENST00000558611 TNKS2Q9H2K2 1166 aa12.61□□□□□ -0.39
MARK3-213ENST00000558611 IGFLR1Q9H665 355 aa12.61□□□□□ -0.39
MARK3-213ENST00000558611 CBX8Q9HC52 389 aa12.61□□□□□ -0.39
MARK3-213ENST00000558611 ATP13A2Q9NQ11 1180 aa12.61□□□□□ -0.39
MARK3-213ENST00000558611 HEG1Q9ULI3 1381 aa12.6□□□□□ -0.39
MARK3-213ENST00000558611 ESYT3A0FGR9 886 aa12.6□□□□□ -0.39
MARK3-213ENST00000558611 BTBD11A6QL63 1104 aa12.6□□□□□ -0.39
MARK3-213ENST00000558611 SOBPA7XYQ1 873 aa12.6□□□□□ -0.39
MARK3-213ENST00000558611 ZNF468Q5VIY5 522 aaPredicted RBP12.6□□□□□ -0.39
MARK3-213ENST00000558611 SMIM5Q71RC9 77 aa12.6□□□□□ -0.39
MARK3-213ENST00000558611 DNAJC10Q8IXB1 793 aa12.6□□□□□ -0.39
MARK3-213ENST00000558611 MICALL1Q8N3F8 863 aa12.6□□□□□ -0.39
MARK3-213ENST00000558611 MICAL1Q8TDZ2 1067 aa12.6□□□□□ -0.39
MARK3-213ENST00000558611 PCDHB14Q9Y5E9 798 aa12.6□□□□□ -0.39
MARK3-213ENST00000558611 CHD4Q14839 1912 aa12.6□□□□□ -0.39
MARK3-213ENST00000558611 ANP32CO43423 234 aa12.59□□□□□ -0.39
MARK3-213ENST00000558611 RPS6KA4O75676 772 aa12.59□□□□□ -0.39
MARK3-213ENST00000558611 ESRRAP11474 423 aaPredicted RBP12.59□□□□□ -0.39
MARK3-213ENST00000558611 ITGA6P23229 1130 aa12.59□□□□□ -0.39
MARK3-213ENST00000558611 POLD1P28340 1107 aa12.59□□□□□ -0.39
MARK3-213ENST00000558611 TAF7LQ5H9L4 462 aa12.59□□□□□ -0.39
MARK3-213ENST00000558611 LARP1BQ659C4 914 aaKnown RBP12.59□□□□□ -0.39
MARK3-213ENST00000558611 CCDC146Q8IYE0 955 aa12.59□□□□□ -0.39
MARK3-213ENST00000558611 JMYQ8N9B5 988 aa12.59□□□□□ -0.39
MARK3-213ENST00000558611 ZNF496Q96IT1 587 aaPredicted RBP12.59□□□□□ -0.39
MARK3-213ENST00000558611 FMNL2Q96PY5 1086 aa12.59□□□□□ -0.39
MARK3-213ENST00000558611 ADAMTS8Q9UP79 889 aa12.59□□□□□ -0.39
MARK3-213ENST00000558611 POLR3KQ9Y2Y1 108 aaPredicted RBP12.59□□□□□ -0.39
MARK3-213ENST00000558611 KIAA1551Q9HCM1 1747 aa12.59□□□□□ -0.39
MARK3-213ENST00000558611 CYP19A1P11511 503 aaPredicted RBP12.58□□□□□ -0.4
MARK3-213ENST00000558611 BRCA1P38398 1863 aaKnown RBP12.58□□□□□ -0.4
MARK3-213ENST00000558611 CTBSQ01459 385 aa12.58□□□□□ -0.4
MARK3-213ENST00000558611 C2orf27AQ580R0 203 aa12.58□□□□□ -0.4
MARK3-213ENST00000558611 MSL1Q68DK7 614 aa12.58□□□□□ -0.4
MARK3-213ENST00000558611 PDZD3Q86UT5 571 aa12.58□□□□□ -0.4
MARK3-213ENST00000558611 FAM35AQ86V20 835 aa12.58□□□□□ -0.4
MARK3-213ENST00000558611 TNFRSF25Q93038 417 aa12.58□□□□□ -0.4
MARK3-213ENST00000558611 RUNDC1Q96C34 613 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms