RNA–Protein interactions for RNA: ENST00000558544.5

TPM1-214, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 1,399 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-214ENST00000558544 PLA2G6O60733 806 aa20.36■□□□□ 0.85
TPM1-214ENST00000558544 CNMDO75829 334 aa20.36■□□□□ 0.85
TPM1-214ENST00000558544 LBX1P52954 281 aa20.36■□□□□ 0.85
TPM1-214ENST00000558544 APOBRQ0VD83 1088 aa20.36■□□□□ 0.85
TPM1-214ENST00000558544 FAM110CQ1W6H9 321 aa20.36■□□□□ 0.85
TPM1-214ENST00000558544 MICU3Q86XE3 530 aa20.36■□□□□ 0.85
TPM1-214ENST00000558544 STAG2Q8N3U4 1231 aa20.36■□□□□ 0.85
TPM1-214ENST00000558544 ZNF296Q8WUU4 475 aaPredicted RBP20.36■□□□□ 0.85
TPM1-214ENST00000558544 AGXT2Q9BYV1 514 aa20.36■□□□□ 0.85
TPM1-214ENST00000558544 CPVLQ9H3G5 476 aa20.36■□□□□ 0.85
TPM1-214ENST00000558544 BTBD7Q9P203 1132 aa20.36■□□□□ 0.85
TPM1-214ENST00000558544 MAD2L2Q9UI95 211 aa20.36■□□□□ 0.85
TPM1-214ENST00000558544 BRPF3Q9ULD4 1205 aa20.36■□□□□ 0.85
TPM1-214ENST00000558544 PLXNB2O15031 1838 aa20.36■□□□□ 0.85
TPM1-214ENST00000558544 SMCHD1A6NHR9 2005 aa20.36■□□□□ 0.85
TPM1-214ENST00000558544 DOCK3Q8IZD9 2030 aa20.36■□□□□ 0.85
TPM1-214ENST00000558544 KLF18A0A0U1RQI7 1052 aa20.35■□□□□ 0.85
TPM1-214ENST00000558544 VWA5AO00534 786 aa20.35■□□□□ 0.85
TPM1-214ENST00000558544 ECM2O94769 699 aaPredicted RBP20.35■□□□□ 0.85
TPM1-214ENST00000558544 ERVK-9P63128 1117 aa20.35■□□□□ 0.85
TPM1-214ENST00000558544 ERVK-24P63145 666 aa20.35■□□□□ 0.85
TPM1-214ENST00000558544 SP3Q02447 781 aa20.35■□□□□ 0.85
TPM1-214ENST00000558544 TOB2Q14106 344 aaPredicted RBP20.35■□□□□ 0.85
TPM1-214ENST00000558544 NOM1Q5C9Z4 860 aaKnown RBP20.35■□□□□ 0.85
TPM1-214ENST00000558544 SYDE2Q5VT97 1194 aa20.35■□□□□ 0.85
TPM1-214ENST00000558544 APOA5Q6Q788 366 aa20.35■□□□□ 0.85
TPM1-214ENST00000558544 BTNL9Q6UXG8 535 aa20.35■□□□□ 0.85
TPM1-214ENST00000558544 CCDC144CPQ8IYA2 1237 aa20.35■□□□□ 0.85
TPM1-214ENST00000558544 FBXL16Q8N461 479 aa20.35■□□□□ 0.85
TPM1-214ENST00000558544 TBC1D32Q96NH3 1257 aa20.35■□□□□ 0.85
TPM1-214ENST00000558544 KIF2CQ99661 725 aa20.35■□□□□ 0.85
TPM1-214ENST00000558544 MORF4L1Q9UBU8 362 aa20.35■□□□□ 0.85
TPM1-214ENST00000558544 PRR12Q9ULL5 1215 aa20.35■□□□□ 0.85
TPM1-214ENST00000558544 NAP1L2Q9ULW6 460 aaPredicted RBP20.35■□□□□ 0.85
TPM1-214ENST00000558544 ADAMTS5Q9UNA0 930 aa20.35■□□□□ 0.85
TPM1-214ENST00000558544 RABGAP1Q9Y3P9 1069 aa20.35■□□□□ 0.85
TPM1-214ENST00000558544 FKTNO75072 461 aa20.34■□□□□ 0.85
TPM1-214ENST00000558544 SYNE3Q6ZMZ3 975 aa20.34■□□□□ 0.85
TPM1-214ENST00000558544 MB21D1Q8N884 522 aa20.34■□□□□ 0.85
TPM1-214ENST00000558544 UBA5Q9GZZ9 404 aa20.34■□□□□ 0.85
TPM1-214ENST00000558544 PALM3A6NDB9 673 aaPredicted RBP20.34■□□□□ 0.85
TPM1-214ENST00000558544 CALM1P0DP23 149 aa20.34■□□□□ 0.85
TPM1-214ENST00000558544 CALM2P0DP24 149 aa20.34■□□□□ 0.85
TPM1-214ENST00000558544 CALM3P0DP25 149 aa20.34■□□□□ 0.85
TPM1-214ENST00000558544 SNAP25P60880 206 aa20.34■□□□□ 0.85
TPM1-214ENST00000558544 PLS1Q14651 629 aa20.34■□□□□ 0.85
TPM1-214ENST00000558544 TMEM132BQ14DG7 1078 aa20.34■□□□□ 0.85
TPM1-214ENST00000558544 Q3C1V9 767 aa20.34■□□□□ 0.85
TPM1-214ENST00000558544 REPS2Q8NFH8 660 aa20.34■□□□□ 0.85
TPM1-214ENST00000558544 GPRC5AQ8NFJ5 357 aa20.34■□□□□ 0.85
TPM1-214ENST00000558544 CTCFLQ8NI51 663 aaPredicted RBP20.34■□□□□ 0.85
TPM1-214ENST00000558544 CD99L2Q8TCZ2 262 aa20.34■□□□□ 0.85
TPM1-214ENST00000558544 MAP3K14Q99558 947 aa20.34■□□□□ 0.85
TPM1-214ENST00000558544 CTDP1Q9Y5B0 961 aaPredicted RBP20.34■□□□□ 0.85
TPM1-214ENST00000558544 GOLGA8BA8MQT2 603 aa20.33■□□□□ 0.84
TPM1-214ENST00000558544 KLRF2D3W0D1 207 aa20.33■□□□□ 0.84
TPM1-214ENST00000558544 ZBTB43O43298 467 aa20.33■□□□□ 0.84
TPM1-214ENST00000558544 ZBED4O75132 1171 aa20.33■□□□□ 0.84
TPM1-214ENST00000558544 NEK4P51957 841 aa20.33■□□□□ 0.84
TPM1-214ENST00000558544 LACTBP83111 547 aaPredicted RBP20.33■□□□□ 0.84
TPM1-214ENST00000558544 LARP6Q9BRS8 491 aaKnown RBP20.33■□□□□ 0.84
TPM1-214ENST00000558544 SLC38A10Q9HBR0 1119 aa20.33■□□□□ 0.84
TPM1-214ENST00000558544 ZNFX1Q9P2E3 1918 aaKnown RBP20.32■□□□□ 0.84
TPM1-214ENST00000558544 GOLGA8AA7E2F4 631 aa20.32■□□□□ 0.84
TPM1-214ENST00000558544 DHX16O60231 1041 aaKnown RBP20.32■□□□□ 0.84
TPM1-214ENST00000558544 KIF5BP33176 963 aa20.32■□□□□ 0.84
TPM1-214ENST00000558544 ARHGAP39Q9C0H5 1083 aa20.32■□□□□ 0.84
TPM1-214ENST00000558544 SPATC1LQ9H0A9 340 aa20.32■□□□□ 0.84
TPM1-214ENST00000558544 ZNF214Q9UL59 606 aaPredicted RBP20.32■□□□□ 0.84
TPM1-214ENST00000558544 RBBP6Q7Z6E9 1792 aaKnown RBP20.31■□□□□ 0.84
TPM1-214ENST00000558544 FDX1P10109 184 aa20.31■□□□□ 0.84
TPM1-214ENST00000558544 CTGFP29279 349 aa20.31■□□□□ 0.84
TPM1-214ENST00000558544 AK2P54819 239 aa20.31■□□□□ 0.84
TPM1-214ENST00000558544 CAP1Q01518 475 aa20.31■□□□□ 0.84
TPM1-214ENST00000558544 CCDC174Q6PII3 467 aa20.31■□□□□ 0.84
TPM1-214ENST00000558544 ADGRF4Q8IZF3 695 aa20.31■□□□□ 0.84
TPM1-214ENST00000558544 CPXCR1Q8N123 301 aa20.31■□□□□ 0.84
TPM1-214ENST00000558544 FANCBQ8NB91 859 aa20.31■□□□□ 0.84
TPM1-214ENST00000558544 ERO1AQ96HE7 468 aa20.31■□□□□ 0.84
TPM1-214ENST00000558544 PORCNQ9H237 461 aa20.31■□□□□ 0.84
TPM1-214ENST00000558544 ALDH8A1Q9H2A2 487 aaPredicted RBP20.31■□□□□ 0.84
TPM1-214ENST00000558544 RANBP17Q9H2T7 1088 aaKnown RBP20.31■□□□□ 0.84
TPM1-214ENST00000558544 RAVER2Q9HCJ3 691 aaKnown RBP20.31■□□□□ 0.84
TPM1-214ENST00000558544 PLEKHA8P1O95397 391 aa20.3■□□□□ 0.84
TPM1-214ENST00000558544 METAP2P50579 478 aaKnown RBP eCLIP20.3■□□□□ 0.84
TPM1-214ENST00000558544 CCNA1P78396 465 aa20.3■□□□□ 0.84
TPM1-214ENST00000558544 KIF22Q14807 665 aa20.3■□□□□ 0.84
TPM1-214ENST00000558544 RTN1Q16799 776 aa20.3■□□□□ 0.84
TPM1-214ENST00000558544 NOL8Q76FK4 1167 aaKnown RBP20.3■□□□□ 0.84
TPM1-214ENST00000558544 NBPF11Q86T75 865 aa20.3■□□□□ 0.84
TPM1-214ENST00000558544 MOV10L1Q9BXT6 1211 aaKnown RBP20.3■□□□□ 0.84
TPM1-214ENST00000558544 VAT1LQ9HCJ6 419 aa20.3■□□□□ 0.84
TPM1-214ENST00000558544 ZNF536O15090 1300 aa20.29■□□□□ 0.84
TPM1-214ENST00000558544 STAT3P40763 770 aa20.29■□□□□ 0.84
TPM1-214ENST00000558544 PSMC4P43686 418 aa20.29■□□□□ 0.84
TPM1-214ENST00000558544 SLC4A3P48751 1232 aa20.29■□□□□ 0.84
TPM1-214ENST00000558544 RCAN1P53805 252 aa20.29■□□□□ 0.84
TPM1-214ENST00000558544 EVCP57679 992 aa20.29■□□□□ 0.84
TPM1-214ENST00000558544 SLC35G1Q2M3R5 365 aa20.29■□□□□ 0.84
TPM1-214ENST00000558544 SNRNP48Q6IEG0 339 aaKnown RBP20.29■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms