RNA–Protein interactions for RNA: ENST00000558532.1

HERC1-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 3

Gene HERC1, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-203ENST00000558532 TOP2AP11388 1531 aaKnown RBP4.51□□□□□ -1.69
HERC1-203ENST00000558532 WIZO95785 1651 aa4.51□□□□□ -1.69
HERC1-203ENST00000558532 BAZ1BQ9UIG0 1483 aaKnown RBP4.51□□□□□ -1.69
HERC1-203ENST00000558532 E9PSI1 815 aa4.51□□□□□ -1.69
HERC1-203ENST00000558532 EFEMP2O95967 443 aa4.51□□□□□ -1.69
HERC1-203ENST00000558532 SYPP08247 313 aa4.51□□□□□ -1.69
HERC1-203ENST00000558532 CD247P20963 164 aa4.51□□□□□ -1.69
HERC1-203ENST00000558532 AFMP43652 599 aa4.51□□□□□ -1.69
HERC1-203ENST00000558532 PCBP3P57721 371 aaKnown RBP4.51□□□□□ -1.69
HERC1-203ENST00000558532 ZNF445P59923 1031 aa4.51□□□□□ -1.69
HERC1-203ENST00000558532 TIGD5Q53EQ6 642 aa4.51□□□□□ -1.69
HERC1-203ENST00000558532 ZPBP2Q6X784 338 aa4.51□□□□□ -1.69
HERC1-203ENST00000558532 PDZD8Q8NEN9 1154 aa4.51□□□□□ -1.69
HERC1-203ENST00000558532 CPLX3Q8WVH0 158 aa4.51□□□□□ -1.69
HERC1-203ENST00000558532 ANAPC16Q96DE5 110 aa4.51□□□□□ -1.69
HERC1-203ENST00000558532 KIRREL1Q96J84 757 aa4.51□□□□□ -1.69
HERC1-203ENST00000558532 HAUS7Q99871 368 aa4.51□□□□□ -1.69
HERC1-203ENST00000558532 KRTAP9-2Q9BYQ4 174 aa4.51□□□□□ -1.69
HERC1-203ENST00000558532 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP4.51□□□□□ -1.69
HERC1-203ENST00000558532 SLC12A7Q9Y666 1083 aa4.51□□□□□ -1.69
HERC1-203ENST00000558532 FANCIQ9NVI1 1328 aa4.5□□□□□ -1.69
HERC1-203ENST00000558532 NOTOA8MTQ0 251 aa4.5□□□□□ -1.69
HERC1-203ENST00000558532 H0Y8X5 98 aa4.5□□□□□ -1.69
HERC1-203ENST00000558532 FKTNO75072 461 aa4.5□□□□□ -1.69
HERC1-203ENST00000558532 ZNF205O95201 554 aa4.5□□□□□ -1.69
HERC1-203ENST00000558532 BMP8BP34820 402 aa4.5□□□□□ -1.69
HERC1-203ENST00000558532 TRHRP34981 398 aaPredicted RBP4.5□□□□□ -1.69
HERC1-203ENST00000558532 CEBPAP49715 358 aaPredicted RBP4.5□□□□□ -1.69
HERC1-203ENST00000558532 PPP2R5EQ16537 467 aa4.5□□□□□ -1.69
HERC1-203ENST00000558532 KCNMB1Q16558 191 aa4.5□□□□□ -1.69
HERC1-203ENST00000558532 OGFOD2Q6N063 350 aa4.5□□□□□ -1.69
HERC1-203ENST00000558532 WAPLQ7Z5K2 1190 aa4.5□□□□□ -1.69
HERC1-203ENST00000558532 MCF2L2Q86YR7 1114 aa4.5□□□□□ -1.69
HERC1-203ENST00000558532 BRF1Q92994 677 aa4.5□□□□□ -1.69
HERC1-203ENST00000558532 KRTAP4-12Q9BQ66 201 aa4.5□□□□□ -1.69
HERC1-203ENST00000558532 KLHL25Q9H0H3 589 aa4.5□□□□□ -1.69
HERC1-203ENST00000558532 FHOD1Q9Y613 1164 aa4.5□□□□□ -1.69
HERC1-203ENST00000558532 MRVI1Q9Y6F6 885 aa4.5□□□□□ -1.69
HERC1-203ENST00000558532 CCDC88BA6NC98 1476 aa4.49□□□□□ -1.69
HERC1-203ENST00000558532 ABCC8Q09428 1581 aa4.49□□□□□ -1.69
HERC1-203ENST00000558532 VPS8Q8N3P4 1428 aa4.49□□□□□ -1.69
HERC1-203ENST00000558532 FITM1A5D6W6 292 aa4.49□□□□□ -1.69
HERC1-203ENST00000558532 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.49□□□□□ -1.69
HERC1-203ENST00000558532 SMAD7O15105 426 aaKnown RBP4.49□□□□□ -1.69
HERC1-203ENST00000558532 GSNP06396 782 aa4.49□□□□□ -1.69
HERC1-203ENST00000558532 GLI1P08151 1106 aa4.49□□□□□ -1.69
HERC1-203ENST00000558532 VAV1P15498 845 aa4.49□□□□□ -1.69
HERC1-203ENST00000558532 RPL10P27635 214 aaKnown RBP4.49□□□□□ -1.69
HERC1-203ENST00000558532 SLC7A5Q01650 507 aa4.49□□□□□ -1.69
HERC1-203ENST00000558532 DUSP4Q13115 394 aa4.49□□□□□ -1.69
HERC1-203ENST00000558532 GNL2Q13823 731 aaKnown RBP4.49□□□□□ -1.69
HERC1-203ENST00000558532 NR0B2Q15466 257 aa4.49□□□□□ -1.69
HERC1-203ENST00000558532 GNPTABQ3T906 1256 aa4.49□□□□□ -1.69
HERC1-203ENST00000558532 RTP2Q5QGT7 225 aa4.49□□□□□ -1.69
HERC1-203ENST00000558532 ANKS4BQ8N8V4 417 aa4.49□□□□□ -1.69
HERC1-203ENST00000558532 ABHD4Q8TB40 342 aa4.49□□□□□ -1.69
HERC1-203ENST00000558532 MYLIPQ8WY64 445 aa4.49□□□□□ -1.69
HERC1-203ENST00000558532 DHX38Q92620 1227 aaKnown RBP4.49□□□□□ -1.69
HERC1-203ENST00000558532 LIN37Q96GY3 246 aaPredicted RBP4.49□□□□□ -1.69
HERC1-203ENST00000558532 MAP6Q96JE9 813 aa4.49□□□□□ -1.69
HERC1-203ENST00000558532 GMLQ99445 158 aa4.49□□□□□ -1.69
HERC1-203ENST00000558532 DSCC1Q9BVC3 393 aa4.49□□□□□ -1.69
HERC1-203ENST00000558532 SLC12A9Q9BXP2 914 aa4.49□□□□□ -1.69
HERC1-203ENST00000558532 RNF32Q9H0A6 362 aa4.49□□□□□ -1.69
HERC1-203ENST00000558532 C19orf44Q9H6X5 657 aa4.49□□□□□ -1.69
HERC1-203ENST00000558532 ERVK13-1Q9NX77 482 aa4.49□□□□□ -1.69
HERC1-203ENST00000558532 SUSD2Q9UGT4 822 aa4.49□□□□□ -1.69
HERC1-203ENST00000558532 DHX57Q6P158 1386 aaKnown RBP4.49□□□□□ -1.69
HERC1-203ENST00000558532 SMARCA2P51531 1590 aa4.48□□□□□ -1.69
HERC1-203ENST00000558532 KRTAP9-6A0A140TA67 174 aa4.48□□□□□ -1.69
HERC1-203ENST00000558532 PSPNO60542 156 aa4.48□□□□□ -1.69
HERC1-203ENST00000558532 USP2O75604 605 aaPredicted RBP4.48□□□□□ -1.69
HERC1-203ENST00000558532 SSBP05455 408 aaKnown RBP eCLIP4.48□□□□□ -1.69
HERC1-203ENST00000558532 EPHX1P07099 455 aa4.48□□□□□ -1.69
HERC1-203ENST00000558532 ITGA4P13612 1032 aa4.48□□□□□ -1.69
HERC1-203ENST00000558532 RAC2P15153 192 aa4.48□□□□□ -1.69
HERC1-203ENST00000558532 DNAJA1P31689 397 aaKnown RBP4.48□□□□□ -1.69
HERC1-203ENST00000558532 ETFBP38117 255 aa4.48□□□□□ -1.69
HERC1-203ENST00000558532 ARID5AQ03989 594 aa4.48□□□□□ -1.69
HERC1-203ENST00000558532 VPS37DQ86XT2 251 aa4.48□□□□□ -1.69
HERC1-203ENST00000558532 KRTAP19-1Q8IUB9 90 aa4.48□□□□□ -1.69
HERC1-203ENST00000558532 FIBCD1Q8N539 461 aa4.48□□□□□ -1.69
HERC1-203ENST00000558532 ZNF513Q8N8E2 541 aaPredicted RBP4.48□□□□□ -1.69
HERC1-203ENST00000558532 SLC43A3Q8NBI5 491 aa4.48□□□□□ -1.69
HERC1-203ENST00000558532 SHISA4Q96DD7 197 aa4.48□□□□□ -1.69
HERC1-203ENST00000558532 HHIPL1Q96JK4 782 aa4.48□□□□□ -1.69
HERC1-203ENST00000558532 FCRL2Q96LA5 508 aaPredicted RBP4.48□□□□□ -1.69
HERC1-203ENST00000558532 BUD13Q9BRD0 619 aaKnown RBP eCLIP4.48□□□□□ -1.69
HERC1-203ENST00000558532 ZNF408Q9H9D4 720 aa4.48□□□□□ -1.69
HERC1-203ENST00000558532 AP5S1Q9NUS5 200 aa4.48□□□□□ -1.69
HERC1-203ENST00000558532 CECR2Q9BXF3 1484 aa4.48□□□□□ -1.69
HERC1-203ENST00000558532 CEP164Q9UPV0 1460 aa4.48□□□□□ -1.69
HERC1-203ENST00000558532 A0A087WZG4 1122 aa4.47□□□□□ -1.69
HERC1-203ENST00000558532 SSU72P8A0A1W2PR75 194 aa4.47□□□□□ -1.69
HERC1-203ENST00000558532 FADS2P1A8MWK0 482 aa4.47□□□□□ -1.69
HERC1-203ENST00000558532 KIR2DL1P43626 348 aaPredicted RBP4.47□□□□□ -1.69
HERC1-203ENST00000558532 KIR2DL2P43627 348 aaPredicted RBP4.47□□□□□ -1.69
HERC1-203ENST00000558532 CHRNEQ04844 493 aa4.47□□□□□ -1.69
HERC1-203ENST00000558532 TMEM67Q5HYA8 995 aa4.47□□□□□ -1.69
HERC1-203ENST00000558532 NOL9Q5SY16 702 aaKnown RBP4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 89.9 ms