RNA–Protein interactions for RNA: ENST00000558500.5

LRRC28-207, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4

Gene LRRC28, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-207ENST00000558500 C11orf16Q9NQ32 467 aa8.25□□□□□ -1.09
LRRC28-207ENST00000558500 DIS3Q9Y2L1 958 aaKnown RBP8.25□□□□□ -1.09
LRRC28-207ENST00000558500 ELP1O95163 1332 aa8.25□□□□□ -1.09
LRRC28-207ENST00000558500 MROH7Q68CQ1 1323 aa8.25□□□□□ -1.09
LRRC28-207ENST00000558500 SYNRGQ9UMZ2 1314 aa8.25□□□□□ -1.09
LRRC28-207ENST00000558500 APBB1O00213 710 aa8.24□□□□□ -1.09
LRRC28-207ENST00000558500 FLOT1O75955 427 aa8.24□□□□□ -1.09
LRRC28-207ENST00000558500 SLC25A27O95847 323 aa8.24□□□□□ -1.09
LRRC28-207ENST00000558500 FGBP02675 491 aa8.24□□□□□ -1.09
LRRC28-207ENST00000558500 CYP7A1P22680 504 aa8.24□□□□□ -1.09
LRRC28-207ENST00000558500 USP5P45974 858 aa8.24□□□□□ -1.09
LRRC28-207ENST00000558500 KCTD2Q14681 263 aa8.24□□□□□ -1.09
LRRC28-207ENST00000558500 SKIV2LQ15477 1246 aaKnown RBP8.24□□□□□ -1.09
LRRC28-207ENST00000558500 KIAA1755Q5JYT7 1200 aa8.24□□□□□ -1.09
LRRC28-207ENST00000558500 TTC39AQ5SRH9 613 aa8.24□□□□□ -1.09
LRRC28-207ENST00000558500 CERS3Q8IU89 383 aa8.24□□□□□ -1.09
LRRC28-207ENST00000558500 KCNV2Q8TDN2 545 aa8.24□□□□□ -1.09
LRRC28-207ENST00000558500 CDCA7LQ96GN5 454 aa8.24□□□□□ -1.09
LRRC28-207ENST00000558500 GLT1D1Q96MS3 346 aa8.24□□□□□ -1.09
LRRC28-207ENST00000558500 MMP19Q99542 508 aa8.24□□□□□ -1.09
LRRC28-207ENST00000558500 PPP1R12CQ9BZL4 782 aa8.24□□□□□ -1.09
LRRC28-207ENST00000558500 MTIF3Q9H2K0 278 aaKnown RBP8.24□□□□□ -1.09
LRRC28-207ENST00000558500 SMC4Q9NTJ3 1288 aa8.24□□□□□ -1.09
LRRC28-207ENST00000558500 FAM184BQ9ULE4 1060 aa8.24□□□□□ -1.09
LRRC28-207ENST00000558500 CNPY2Q9Y2B0 182 aa8.24□□□□□ -1.09
LRRC28-207ENST00000558500 GTF3C3Q9Y5Q9 886 aa8.24□□□□□ -1.09
LRRC28-207ENST00000558500 A0A0U1RQG5 324 aaPredicted RBP8.23□□□□□ -1.09
LRRC28-207ENST00000558500 MYADML2A6NDP7 307 aa8.23□□□□□ -1.09
LRRC28-207ENST00000558500 ARVCFO00192 962 aa8.23□□□□□ -1.09
LRRC28-207ENST00000558500 MPHOSPH10O00566 681 aaKnown RBP8.23□□□□□ -1.09
LRRC28-207ENST00000558500 TLR3O15455 904 aaKnown RBP8.23□□□□□ -1.09
LRRC28-207ENST00000558500 TLL1O43897 1013 aa8.23□□□□□ -1.09
LRRC28-207ENST00000558500 POU3F3P20264 500 aaPredicted RBP8.23□□□□□ -1.09
LRRC28-207ENST00000558500 CST5P28325 142 aaPredicted RBP8.23□□□□□ -1.09
LRRC28-207ENST00000558500 CYP2C18P33260 490 aa8.23□□□□□ -1.09
LRRC28-207ENST00000558500 ZAP70P43403 619 aa8.23□□□□□ -1.09
LRRC28-207ENST00000558500 PLCD1P51178 756 aa8.23□□□□□ -1.09
LRRC28-207ENST00000558500 TMEM132BQ14DG7 1078 aa8.23□□□□□ -1.09
LRRC28-207ENST00000558500 TMEM132AQ24JP5 1023 aa8.23□□□□□ -1.09
LRRC28-207ENST00000558500 CCDC158Q5M9N0 1113 aa8.23□□□□□ -1.09
LRRC28-207ENST00000558500 PPP2R2DQ66LE6 453 aa8.23□□□□□ -1.09
LRRC28-207ENST00000558500 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.23□□□□□ -1.09
LRRC28-207ENST00000558500 RIOX2Q8IUF8 465 aa8.23□□□□□ -1.09
LRRC28-207ENST00000558500 FAM126BQ8IXS8 530 aa8.23□□□□□ -1.09
LRRC28-207ENST00000558500 MIGA1Q8NAN2 632 aa8.23□□□□□ -1.09
LRRC28-207ENST00000558500 KHSRPQ92945 711 aaKnown RBP eCLIP8.23□□□□□ -1.09
LRRC28-207ENST00000558500 PIH1D3Q9NQM4 214 aaKnown RBP8.23□□□□□ -1.09
LRRC28-207ENST00000558500 WDR70Q9NW82 654 aa8.23□□□□□ -1.09
LRRC28-207ENST00000558500 COG5Q9UP83 839 aa8.23□□□□□ -1.09
LRRC28-207ENST00000558500 MTCH2Q9Y6C9 303 aa8.23□□□□□ -1.09
LRRC28-207ENST00000558500 FAM86C2PA6NEL3 165 aa8.22□□□□□ -1.09
LRRC28-207ENST00000558500 DUSP11O75319 330 aaKnown RBP8.22□□□□□ -1.09
LRRC28-207ENST00000558500 SNAI1O95863 264 aaPredicted RBP8.22□□□□□ -1.09
LRRC28-207ENST00000558500 CD4P01730 458 aa8.22□□□□□ -1.09
LRRC28-207ENST00000558500 ASGR1P07306 291 aa8.22□□□□□ -1.09
LRRC28-207ENST00000558500 GNAI3P08754 354 aa8.22□□□□□ -1.09
LRRC28-207ENST00000558500 RABGGTBP53611 331 aa8.22□□□□□ -1.09
LRRC28-207ENST00000558500 GABPAQ06546 454 aa8.22□□□□□ -1.09
LRRC28-207ENST00000558500 G3BP1Q13283 466 aaKnown RBP eCLIP8.22□□□□□ -1.09
LRRC28-207ENST00000558500 OTOP2Q7RTS6 562 aa8.22□□□□□ -1.09
LRRC28-207ENST00000558500 SPICE1Q8N0Z3 855 aa8.22□□□□□ -1.09
LRRC28-207ENST00000558500 MSL3Q8N5Y2 521 aaKnown RBP8.22□□□□□ -1.09
LRRC28-207ENST00000558500 PDCD7Q8N8D1 485 aaKnown RBP8.22□□□□□ -1.09
LRRC28-207ENST00000558500 PCSK9Q8NBP7 692 aaKnown RBP8.22□□□□□ -1.09
LRRC28-207ENST00000558500 VTI1AQ96AJ9 217 aa8.22□□□□□ -1.09
LRRC28-207ENST00000558500 ZNF512BQ96KM6 892 aaPredicted RBP8.22□□□□□ -1.09
LRRC28-207ENST00000558500 DBNDD2Q9BQY9 259 aa8.22□□□□□ -1.09
LRRC28-207ENST00000558500 API5Q9BZZ5 524 aaKnown RBP8.22□□□□□ -1.09
LRRC28-207ENST00000558500 GPR108Q9NPR9 543 aa8.22□□□□□ -1.09
LRRC28-207ENST00000558500 NOB1Q9ULX3 412 aaKnown RBP8.22□□□□□ -1.09
LRRC28-207ENST00000558500 ADAMTS5Q9UNA0 930 aa8.22□□□□□ -1.09
LRRC28-207ENST00000558500 PCDHA11Q9Y5I1 949 aa8.22□□□□□ -1.09
LRRC28-207ENST00000558500 XIRP2A4UGR9 3374 aa8.21□□□□□ -1.09
LRRC28-207ENST00000558500 E9PSI1 815 aa8.21□□□□□ -1.1
LRRC28-207ENST00000558500 PI4K2BG5E9Z4 385 aa8.21□□□□□ -1.1
LRRC28-207ENST00000558500 IDH1O75874 414 aaKnown RBP8.21□□□□□ -1.1
LRRC28-207ENST00000558500 POLR3DP05423 398 aaPredicted RBP8.21□□□□□ -1.1
LRRC28-207ENST00000558500 C6orf222P0C671 652 aaPredicted RBP8.21□□□□□ -1.1
LRRC28-207ENST00000558500 MYOGP15173 224 aa8.21□□□□□ -1.1
LRRC28-207ENST00000558500 STAT3P40763 770 aa8.21□□□□□ -1.1
LRRC28-207ENST00000558500 GJA9P57773 515 aa8.21□□□□□ -1.1
LRRC28-207ENST00000558500 TNNI3KQ59H18 835 aa8.21□□□□□ -1.1
LRRC28-207ENST00000558500 TMEM179Q6ZVK1 233 aa8.21□□□□□ -1.1
LRRC28-207ENST00000558500 SIAH1Q8IUQ4 282 aa8.21□□□□□ -1.1
LRRC28-207ENST00000558500 SNX27Q96L92 541 aa8.21□□□□□ -1.1
LRRC28-207ENST00000558500 MFRPQ9BY79 579 aa8.21□□□□□ -1.1
LRRC28-207ENST00000558500 UPF3AQ9H1J1 476 aaKnown RBP8.21□□□□□ -1.1
LRRC28-207ENST00000558500 VCPKMTQ9H867 229 aa8.21□□□□□ -1.1
LRRC28-207ENST00000558500 SPC25Q9HBM1 224 aa8.21□□□□□ -1.1
LRRC28-207ENST00000558500 ZHX1Q9UKY1 873 aaPredicted RBP8.21□□□□□ -1.1
LRRC28-207ENST00000558500 TMX2Q9Y320 296 aa8.21□□□□□ -1.1
LRRC28-207ENST00000558500 SLC4A7Q9Y6M7 1214 aa8.21□□□□□ -1.1
LRRC28-207ENST00000558500 FPGT-TNNI3KV9GXZ4 949 aa8.21□□□□□ -1.1
LRRC28-207ENST00000558500 UMODL1Q5DID0 1318 aa8.21□□□□□ -1.1
LRRC28-207ENST00000558500 CHD7Q9P2D1 2997 aa8.21□□□□□ -1.1
LRRC28-207ENST00000558500 A0A0G2JMZ2 1700 aa8.2□□□□□ -1.1
LRRC28-207ENST00000558500 SMIM22K7EJ46 135 aa8.2□□□□□ -1.1
LRRC28-207ENST00000558500 RFXAPO00287 272 aa8.2□□□□□ -1.1
LRRC28-207ENST00000558500 VWA5AO00534 786 aa8.2□□□□□ -1.1
LRRC28-207ENST00000558500 WDR46O15213 610 aaKnown RBP8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms