RNA–Protein interactions for RNA: ENST00000558324.1

HERC1-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 5

Gene HERC1, Length 828 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-202ENST00000558324 CCDC171Q6TFL3 1326 aa14.14□□□□□ -0.15
HERC1-202ENST00000558324 BMP3P12645 472 aa14.13□□□□□ -0.15
HERC1-202ENST00000558324 HAND2P61296 217 aa14.13□□□□□ -0.15
HERC1-202ENST00000558324 IKQ13123 557 aaPredicted RBP14.13□□□□□ -0.15
HERC1-202ENST00000558324 PRAMEF19Q5SWL8 479 aa14.13□□□□□ -0.15
HERC1-202ENST00000558324 RASGRP2Q7LDG7 609 aa14.13□□□□□ -0.15
HERC1-202ENST00000558324 MAML3Q96JK9 1138 aa14.13□□□□□ -0.15
HERC1-202ENST00000558324 TEX13BQ9BXU2 312 aa14.13□□□□□ -0.15
HERC1-202ENST00000558324 RAVER2Q9HCJ3 691 aaKnown RBP14.13□□□□□ -0.15
HERC1-202ENST00000558324 FEM1BQ9UK73 627 aa14.13□□□□□ -0.15
HERC1-202ENST00000558324 ZBED4O75132 1171 aa14.12□□□□□ -0.15
HERC1-202ENST00000558324 FGAP02671 866 aa14.12□□□□□ -0.15
HERC1-202ENST00000558324 MYCNP04198 464 aaPredicted RBP14.12□□□□□ -0.15
HERC1-202ENST00000558324 HSPD1P10809 573 aaKnown RBP14.12□□□□□ -0.15
HERC1-202ENST00000558324 SDSP20132 328 aa14.12□□□□□ -0.15
HERC1-202ENST00000558324 COPB2P35606 906 aa14.12□□□□□ -0.15
HERC1-202ENST00000558324 ALX1Q15699 326 aa14.12□□□□□ -0.15
HERC1-202ENST00000558324 IL17RBQ9NRM6 502 aa14.12□□□□□ -0.15
HERC1-202ENST00000558324 RBM27Q9P2N5 1060 aaKnown RBP14.12□□□□□ -0.15
HERC1-202ENST00000558324 ANAPC4Q9UJX5 808 aa14.12□□□□□ -0.15
HERC1-202ENST00000558324 ZMYND8Q9ULU4 1186 aaPredicted RBP14.12□□□□□ -0.15
HERC1-202ENST00000558324 SYNPO2Q9UMS6 1093 aa14.12□□□□□ -0.15
HERC1-202ENST00000558324 RIPK3Q9Y572 518 aa14.12□□□□□ -0.15
HERC1-202ENST00000558324 FRMPD3Q5JV73 1810 aa14.11□□□□□ -0.15
HERC1-202ENST00000558324 TMEM232C9JQI7 657 aa14.11□□□□□ -0.15
HERC1-202ENST00000558324 MSCO60682 206 aa14.11□□□□□ -0.15
HERC1-202ENST00000558324 IGHA2P01877 340 aa14.11□□□□□ -0.15
HERC1-202ENST00000558324 SYN1P17600 705 aa14.11□□□□□ -0.15
HERC1-202ENST00000558324 MCCP23508 829 aa14.11□□□□□ -0.15
HERC1-202ENST00000558324 SLC1A4P43007 532 aa14.11□□□□□ -0.15
HERC1-202ENST00000558324 CWC27Q6UX04 472 aaKnown RBP14.11□□□□□ -0.15
HERC1-202ENST00000558324 KCTD1Q719H9 257 aa14.11□□□□□ -0.15
HERC1-202ENST00000558324 OSBPL3Q9H4L5 887 aa14.11□□□□□ -0.15
HERC1-202ENST00000558324 HOMER2Q9NSB8 354 aa14.11□□□□□ -0.15
HERC1-202ENST00000558324 DIAPH3Q9NSV4 1193 aa14.11□□□□□ -0.15
HERC1-202ENST00000558324 PCDH10Q9P2E7 1040 aa14.11□□□□□ -0.15
HERC1-202ENST00000558324 ALPK3Q96L96 1907 aa14.11□□□□□ -0.15
HERC1-202ENST00000558324 ORC4O43929 436 aa14.1□□□□□ -0.15
HERC1-202ENST00000558324 COL6A1P12109 1028 aa14.1□□□□□ -0.15
HERC1-202ENST00000558324 STAT2P52630 851 aa14.1□□□□□ -0.15
HERC1-202ENST00000558324 PPP4R3BQ5MIZ7 849 aa14.1□□□□□ -0.15
HERC1-202ENST00000558324 GJC2Q5T442 439 aaPredicted RBP14.1□□□□□ -0.15
HERC1-202ENST00000558324 DDX11Q96FC9 970 aa14.1□□□□□ -0.15
HERC1-202ENST00000558324 SLC38A10Q9HBR0 1119 aa14.1□□□□□ -0.15
HERC1-202ENST00000558324 SEPT4O43236 478 aa14.09□□□□□ -0.15
HERC1-202ENST00000558324 FXR1P51114 621 aaKnown RBP eCLIP14.09□□□□□ -0.15
HERC1-202ENST00000558324 MFAP1P55081 439 aaKnown RBP14.09□□□□□ -0.15
HERC1-202ENST00000558324 SNAP25P60880 206 aa14.09□□□□□ -0.15
HERC1-202ENST00000558324 LRRC26Q2I0M4 334 aa14.09□□□□□ -0.15
HERC1-202ENST00000558324 CCDC96Q2M329 555 aa14.09□□□□□ -0.15
HERC1-202ENST00000558324 ZNF792Q3KQV3 632 aa14.09□□□□□ -0.15
HERC1-202ENST00000558324 TICAM2Q86XR7 235 aa14.09□□□□□ -0.15
HERC1-202ENST00000558324 TBC1D10CQ8IV04 446 aa14.09□□□□□ -0.15
HERC1-202ENST00000558324 GMCL1Q96IK5 515 aa14.09□□□□□ -0.15
HERC1-202ENST00000558324 SENP6Q9GZR1 1112 aaPredicted RBP14.09□□□□□ -0.15
HERC1-202ENST00000558324 ZMYM6O95789 1325 aa14.09□□□□□ -0.15
HERC1-202ENST00000558324 DNM1LO00429 736 aa14.08□□□□□ -0.16
HERC1-202ENST00000558324 ATP2A1O14983 1001 aa14.08□□□□□ -0.16
HERC1-202ENST00000558324 FGRP09769 529 aa14.08□□□□□ -0.16
HERC1-202ENST00000558324 TAL1P17542 331 aaPredicted RBP14.08□□□□□ -0.16
HERC1-202ENST00000558324 PDE4AP27815 886 aa14.08□□□□□ -0.16
HERC1-202ENST00000558324 ATN1P54259 1190 aaPredicted RBP14.08□□□□□ -0.16
HERC1-202ENST00000558324 CCDC174Q6PII3 467 aa14.08□□□□□ -0.16
HERC1-202ENST00000558324 MFSD6Q6ZSS7 791 aa14.08□□□□□ -0.16
HERC1-202ENST00000558324 FAM160B2Q86V87 743 aa14.08□□□□□ -0.16
HERC1-202ENST00000558324 CHURC1Q8WUH1 139 aa14.08□□□□□ -0.16
HERC1-202ENST00000558324 STAG1Q8WVM7 1258 aa14.08□□□□□ -0.16
HERC1-202ENST00000558324 TINF2Q9BSI4 451 aa14.08□□□□□ -0.16
HERC1-202ENST00000558324 KBTBD13C9JR72 458 aa14.07□□□□□ -0.16
HERC1-202ENST00000558324 OAZ1P54368 228 aa14.07□□□□□ -0.16
HERC1-202ENST00000558324 AKNAD1Q5T1N1 836 aa14.07□□□□□ -0.16
HERC1-202ENST00000558324 RCSD1Q6JBY9 416 aa14.07□□□□□ -0.16
HERC1-202ENST00000558324 ANKRD35Q8N283 1001 aa14.07□□□□□ -0.16
HERC1-202ENST00000558324 ARRDC4Q8NCT1 418 aa14.07□□□□□ -0.16
HERC1-202ENST00000558324 LENG1Q96BZ8 264 aaPredicted RBP14.07□□□□□ -0.16
HERC1-202ENST00000558324 AGBL1Q96MI9 1066 aa14.07□□□□□ -0.16
HERC1-202ENST00000558324 CNPY2Q9Y2B0 182 aa14.07□□□□□ -0.16
HERC1-202ENST00000558324 DIS3Q9Y2L1 958 aaKnown RBP14.07□□□□□ -0.16
HERC1-202ENST00000558324 NEDD4P46934 1319 aa14.07□□□□□ -0.16
HERC1-202ENST00000558324 FRMPD2Q68DX3 1309 aaPredicted RBP14.07□□□□□ -0.16
HERC1-202ENST00000558324 HIP1O00291 1037 aa14.06□□□□□ -0.16
HERC1-202ENST00000558324 ZNF213O14771 459 aa14.06□□□□□ -0.16
HERC1-202ENST00000558324 TOP1P11387 765 aaKnown RBP14.06□□□□□ -0.16
HERC1-202ENST00000558324 ALAS1P13196 640 aa14.06□□□□□ -0.16
HERC1-202ENST00000558324 CHST13Q8NET6 341 aa14.06□□□□□ -0.16
HERC1-202ENST00000558324 TMEM47Q9BQJ4 181 aa14.06□□□□□ -0.16
HERC1-202ENST00000558324 ZKSCAN3Q9BRR0 538 aa14.06□□□□□ -0.16
HERC1-202ENST00000558324 PRO3102Q9H379 93 aa14.06□□□□□ -0.16
HERC1-202ENST00000558324 GPCPD1Q9NPB8 672 aa14.06□□□□□ -0.16
HERC1-202ENST00000558324 XPNPEP3Q9NQH7 507 aa14.06□□□□□ -0.16
HERC1-202ENST00000558324 RNF146Q9NTX7 359 aa14.06□□□□□ -0.16
HERC1-202ENST00000558324 FBXO40Q9UH90 709 aa14.06□□□□□ -0.16
HERC1-202ENST00000558324 ZHX1Q9UKY1 873 aaPredicted RBP14.06□□□□□ -0.16
HERC1-202ENST00000558324 PRR12Q9ULL5 1215 aa14.06□□□□□ -0.16
HERC1-202ENST00000558324 PLXNA1Q9UIW2 1896 aa14.06□□□□□ -0.16
HERC1-202ENST00000558324 DNAJC25-GNG10A0A024R161 153 aa14.05□□□□□ -0.16
HERC1-202ENST00000558324 PGK1P00558 417 aa14.05□□□□□ -0.16
HERC1-202ENST00000558324 ZNF865P0CJ78 1059 aaPredicted RBP14.05□□□□□ -0.16
HERC1-202ENST00000558324 FDX1P10109 184 aa14.05□□□□□ -0.16
HERC1-202ENST00000558324 RARBP10826 455 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms