RNA–Protein interactions for RNA: ENST00000557884.5

USP3-205, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 3

Gene USP3, Length 958 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-205ENST00000557884 CASTP20810 708 aaKnown RBP16.77■□□□□ 0.28
USP3-205ENST00000557884 SLC4A3P48751 1232 aa16.77■□□□□ 0.28
USP3-205ENST00000557884 CCNA1P78396 465 aa16.77■□□□□ 0.28
USP3-205ENST00000557884 EXOSC10Q01780 885 aaKnown RBP16.77■□□□□ 0.28
USP3-205ENST00000557884 SYDE2Q5VT97 1194 aa16.77■□□□□ 0.28
USP3-205ENST00000557884 REPS2Q8NFH8 660 aa16.77■□□□□ 0.28
USP3-205ENST00000557884 MYL10Q9BUA6 226 aa16.77■□□□□ 0.28
USP3-205ENST00000557884 MOV10L1Q9BXT6 1211 aaKnown RBP16.77■□□□□ 0.28
USP3-205ENST00000557884 CPVLQ9H3G5 476 aa16.77■□□□□ 0.28
USP3-205ENST00000557884 PRR12Q9ULL5 1215 aa16.77■□□□□ 0.28
USP3-205ENST00000557884 HTTP42858 3142 aa16.76■□□□□ 0.27
USP3-205ENST00000557884 CCDC69A6NI79 296 aa16.76■□□□□ 0.27
USP3-205ENST00000557884 PLA2G6O60733 806 aa16.76■□□□□ 0.27
USP3-205ENST00000557884 EIF5BO60841 1220 aaKnown RBP16.76■□□□□ 0.27
USP3-205ENST00000557884 HMGB1P09429 215 aaKnown RBP16.76■□□□□ 0.27
USP3-205ENST00000557884 PARP1P09874 1014 aaKnown RBP16.76■□□□□ 0.27
USP3-205ENST00000557884 BLOC1S2Q6QNY1 142 aa16.76■□□□□ 0.27
USP3-205ENST00000557884 CATIPQ7Z7H3 387 aa16.76■□□□□ 0.27
USP3-205ENST00000557884 RAB11FIP4Q86YS3 637 aa16.76■□□□□ 0.27
USP3-205ENST00000557884 CPXCR1Q8N123 301 aa16.76■□□□□ 0.27
USP3-205ENST00000557884 NUP133Q8WUM0 1156 aa16.76■□□□□ 0.27
USP3-205ENST00000557884 MTA3Q9BTC8 594 aa16.76■□□□□ 0.27
USP3-205ENST00000557884 MCOLN1Q9GZU1 580 aa16.76■□□□□ 0.27
USP3-205ENST00000557884 UBA5Q9GZZ9 404 aa16.76■□□□□ 0.27
USP3-205ENST00000557884 SLC38A10Q9HBR0 1119 aa16.76■□□□□ 0.27
USP3-205ENST00000557884 RAVER2Q9HCJ3 691 aaKnown RBP16.76■□□□□ 0.27
USP3-205ENST00000557884 RPS6KB1P23443 525 aa16.75■□□□□ 0.27
USP3-205ENST00000557884 PSMA5P28066 241 aa16.75■□□□□ 0.27
USP3-205ENST00000557884 MAPK4P31152 587 aa16.75■□□□□ 0.27
USP3-205ENST00000557884 STAT3P40763 770 aa16.75■□□□□ 0.27
USP3-205ENST00000557884 FGD1P98174 961 aa16.75■□□□□ 0.27
USP3-205ENST00000557884 PRKCZQ05513 592 aa16.75■□□□□ 0.27
USP3-205ENST00000557884 ASPRV1Q53RT3 343 aa16.75■□□□□ 0.27
USP3-205ENST00000557884 GPATCH4Q5T3I0 446 aaKnown RBP16.75■□□□□ 0.27
USP3-205ENST00000557884 SNRNP48Q6IEG0 339 aaKnown RBP16.75■□□□□ 0.27
USP3-205ENST00000557884 CCDC174Q6PII3 467 aa16.75■□□□□ 0.27
USP3-205ENST00000557884 BTNL9Q6UXG8 535 aa16.75■□□□□ 0.27
USP3-205ENST00000557884 NCAPG2Q86XI2 1143 aa16.75■□□□□ 0.27
USP3-205ENST00000557884 ZNF654Q8IZM8 581 aa16.75■□□□□ 0.27
USP3-205ENST00000557884 STAG2Q8N3U4 1231 aa16.75■□□□□ 0.27
USP3-205ENST00000557884 COA7Q96BR5 231 aa16.75■□□□□ 0.27
USP3-205ENST00000557884 SRRDQ9UH36 339 aa16.75■□□□□ 0.27
USP3-205ENST00000557884 ZNF214Q9UL59 606 aaPredicted RBP16.75■□□□□ 0.27
USP3-205ENST00000557884 GABRQQ9UN88 632 aa16.75■□□□□ 0.27
USP3-205ENST00000557884 WDR19Q8NEZ3 1342 aa16.74■□□□□ 0.27
USP3-205ENST00000557884 TAL1P17542 331 aaPredicted RBP16.74■□□□□ 0.27
USP3-205ENST00000557884 ERCC3P19447 782 aa16.74■□□□□ 0.27
USP3-205ENST00000557884 RXRAP19793 462 aa16.74■□□□□ 0.27
USP3-205ENST00000557884 HOXD10P28358 340 aa16.74■□□□□ 0.27
USP3-205ENST00000557884 LIFRP42702 1097 aa16.74■□□□□ 0.27
USP3-205ENST00000557884 TROAPQ12815 778 aa16.74■□□□□ 0.27
USP3-205ENST00000557884 GRM4Q14833 912 aa16.74■□□□□ 0.27
USP3-205ENST00000557884 GPR142Q7Z601 462 aa16.74■□□□□ 0.27
USP3-205ENST00000557884 PLEKHH3Q7Z736 793 aa16.74■□□□□ 0.27
USP3-205ENST00000557884 UPF3BQ9BZI7 483 aaKnown RBP16.74■□□□□ 0.27
USP3-205ENST00000557884 MAD2L2Q9UI95 211 aa16.74■□□□□ 0.27
USP3-205ENST00000557884 PTPN22Q9Y2R2 807 aa16.74■□□□□ 0.27
USP3-205ENST00000557884 PTCH2Q9Y6C5 1203 aa16.74■□□□□ 0.27
USP3-205ENST00000557884 ZSWIM8A7E2V4 1837 aa16.74■□□□□ 0.27
USP3-205ENST00000557884 GNRH1P01148 92 aa16.73■□□□□ 0.27
USP3-205ENST00000557884 Q6ZUG5 572 aa16.73■□□□□ 0.27
USP3-205ENST00000557884 RIOX2Q8IUF8 465 aa16.73■□□□□ 0.27
USP3-205ENST00000557884 CCDC144CPQ8IYA2 1237 aa16.73■□□□□ 0.27
USP3-205ENST00000557884 TNS4Q8IZW8 715 aa16.73■□□□□ 0.27
USP3-205ENST00000557884 TMTC2Q8N394 836 aa16.73■□□□□ 0.27
USP3-205ENST00000557884 TEX13BQ9BXU2 312 aa16.73■□□□□ 0.27
USP3-205ENST00000557884 VAT1LQ9HCJ6 419 aa16.73■□□□□ 0.27
USP3-205ENST00000557884 NAP1L2Q9ULW6 460 aaPredicted RBP16.73■□□□□ 0.27
USP3-205ENST00000557884 RIPK3Q9Y572 518 aa16.73■□□□□ 0.27
USP3-205ENST00000557884 SLC12A7Q9Y666 1083 aa16.73■□□□□ 0.27
USP3-205ENST00000557884 RLFQ13129 1914 aa16.72■□□□□ 0.27
USP3-205ENST00000557884 DHX16O60231 1041 aaKnown RBP16.72■□□□□ 0.27
USP3-205ENST00000557884 DDAH1O94760 285 aa16.72■□□□□ 0.27
USP3-205ENST00000557884 FDX1P10109 184 aa16.72■□□□□ 0.27
USP3-205ENST00000557884 FLT3LGP49771 235 aa16.72■□□□□ 0.27
USP3-205ENST00000557884 PKN2Q16513 984 aaKnown RBP16.72■□□□□ 0.27
USP3-205ENST00000557884 FBXO46Q6PJ61 603 aaPredicted RBP16.72■□□□□ 0.27
USP3-205ENST00000557884 MICU3Q86XE3 530 aa16.72■□□□□ 0.27
USP3-205ENST00000557884 SHCBP1Q8NEM2 672 aa16.72■□□□□ 0.27
USP3-205ENST00000557884 RAET1EQ8TD07 263 aa16.72■□□□□ 0.27
USP3-205ENST00000557884 AGBL1Q96MI9 1066 aa16.72■□□□□ 0.27
USP3-205ENST00000557884 RANBP17Q9H2T7 1088 aaKnown RBP16.72■□□□□ 0.27
USP3-205ENST00000557884 ZSWIM6Q9HCJ5 1215 aa16.72■□□□□ 0.27
USP3-205ENST00000557884 HOMER2Q9NSB8 354 aa16.72■□□□□ 0.27
USP3-205ENST00000557884 BRPF3Q9ULD4 1205 aa16.72■□□□□ 0.27
USP3-205ENST00000557884 CYP46A1Q9Y6A2 500 aa16.72■□□□□ 0.27
USP3-205ENST00000557884 IVNS1ABPQ9Y6Y0 642 aa16.72■□□□□ 0.27
USP3-205ENST00000557884 ZNF536O15090 1300 aa16.71■□□□□ 0.27
USP3-205ENST00000557884 A0A0G2JMZ2 1700 aa16.71■□□□□ 0.27
USP3-205ENST00000557884 KLF18A0A0U1RQI7 1052 aa16.71■□□□□ 0.27
USP3-205ENST00000557884 PALM3A6NDB9 673 aaPredicted RBP16.71■□□□□ 0.27
USP3-205ENST00000557884 KLRF2D3W0D1 207 aa16.71■□□□□ 0.27
USP3-205ENST00000557884 SLC25A27O95847 323 aa16.71■□□□□ 0.27
USP3-205ENST00000557884 APOBRQ0VD83 1088 aa16.71■□□□□ 0.27
USP3-205ENST00000557884 RUFY3Q7L099 469 aa16.71■□□□□ 0.27
USP3-205ENST00000557884 SGMS1Q86VZ5 419 aa16.71■□□□□ 0.27
USP3-205ENST00000557884 ADGRF4Q8IZF3 695 aa16.71■□□□□ 0.27
USP3-205ENST00000557884 BRF1Q92994 677 aa16.71■□□□□ 0.27
USP3-205ENST00000557884 TM6SF1Q9BZW5 370 aa16.71■□□□□ 0.27
USP3-205ENST00000557884 MROH8Q9H579 483 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms