RNA–Protein interactions for RNA: ENST00000557768.1

HNRNPC-233, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 3

Gene HNRNPC, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-233ENST00000557768 HTRA3P83110 453 aa7.32□□□□□ -1.24
HNRNPC-233ENST00000557768 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.32□□□□□ -1.24
HNRNPC-233ENST00000557768 PLEKHO1Q53GL0 409 aaPredicted RBP7.32□□□□□ -1.24
HNRNPC-233ENST00000557768 PRPF40BQ6NWY9 871 aaKnown RBP7.32□□□□□ -1.24
HNRNPC-233ENST00000557768 ZNF530Q6P9A1 599 aaPredicted RBP7.32□□□□□ -1.24
HNRNPC-233ENST00000557768 PRR23CQ6ZRP0 262 aa7.32□□□□□ -1.24
HNRNPC-233ENST00000557768 DNAJC5GQ8N7S2 189 aa7.32□□□□□ -1.24
HNRNPC-233ENST00000557768 RNF208Q9H0X6 261 aa7.32□□□□□ -1.24
HNRNPC-233ENST00000557768 SOX17Q9H6I2 414 aaPredicted RBP7.32□□□□□ -1.24
HNRNPC-233ENST00000557768 CCSER2Q9H7U1 834 aa7.32□□□□□ -1.24
HNRNPC-233ENST00000557768 METTL5Q9NRN9 209 aaKnown RBP7.32□□□□□ -1.24
HNRNPC-233ENST00000557768 KCPQ6ZWJ8 1503 aa7.32□□□□□ -1.24
HNRNPC-233ENST00000557768 DICER1Q9UPY3 1922 aaKnown RBP7.31□□□□□ -1.24
HNRNPC-233ENST00000557768 LOC100289279A0A1B0GTE1 492 aa7.31□□□□□ -1.24
HNRNPC-233ENST00000557768 HSP90AB1P08238 724 aaKnown RBP7.31□□□□□ -1.24
HNRNPC-233ENST00000557768 CHRNA5P30532 468 aa7.31□□□□□ -1.24
HNRNPC-233ENST00000557768 CRKLP46109 303 aaKnown RBP7.31□□□□□ -1.24
HNRNPC-233ENST00000557768 MTHFSP49914 203 aa7.31□□□□□ -1.24
HNRNPC-233ENST00000557768 FANCCQ00597 558 aa7.31□□□□□ -1.24
HNRNPC-233ENST00000557768 DDR1Q08345 913 aa7.31□□□□□ -1.24
HNRNPC-233ENST00000557768 FDX2Q6P4F2 183 aa7.31□□□□□ -1.24
HNRNPC-233ENST00000557768 ANKRD31Q8N7Z5 1873 aa7.31□□□□□ -1.24
HNRNPC-233ENST00000557768 UTP4Q969X6 686 aaKnown RBP7.31□□□□□ -1.24
HNRNPC-233ENST00000557768 TANGO6Q9C0B7 1094 aa7.31□□□□□ -1.24
HNRNPC-233ENST00000557768 ZNF576Q9H609 170 aa7.31□□□□□ -1.24
HNRNPC-233ENST00000557768 CAPN10Q9HC96 672 aa7.31□□□□□ -1.24
HNRNPC-233ENST00000557768 PIM2Q9P1W9 311 aa7.31□□□□□ -1.24
HNRNPC-233ENST00000557768 NRXN2Q9P2S2 1712 aa7.31□□□□□ -1.24
HNRNPC-233ENST00000557768 UBR2Q8IWV8 1755 aa7.31□□□□□ -1.24
HNRNPC-233ENST00000557768 USP42Q9H9J4 1324 aaKnown RBP7.3□□□□□ -1.24
HNRNPC-233ENST00000557768 TMEM238LA0A1B0GVL6 79 aa7.3□□□□□ -1.24
HNRNPC-233ENST00000557768 DHX15O43143 795 aaKnown RBP7.3□□□□□ -1.24
HNRNPC-233ENST00000557768 SMARCA5O60264 1052 aaPredicted RBP7.3□□□□□ -1.24
HNRNPC-233ENST00000557768 ITPKAP23677 461 aa7.3□□□□□ -1.24
HNRNPC-233ENST00000557768 GNA15P30679 374 aa7.3□□□□□ -1.24
HNRNPC-233ENST00000557768 ZNF157P51786 506 aaPredicted RBP7.3□□□□□ -1.24
HNRNPC-233ENST00000557768 DALRD3Q5D0E6 543 aaKnown RBP7.3□□□□□ -1.24
HNRNPC-233ENST00000557768 C1orf141Q5JVX7 400 aa7.3□□□□□ -1.24
HNRNPC-233ENST00000557768 ZMYM1Q5SVZ6 1142 aa7.3□□□□□ -1.24
HNRNPC-233ENST00000557768 C16orf71Q8IYS4 520 aaPredicted RBP7.3□□□□□ -1.24
HNRNPC-233ENST00000557768 BCO2Q9BYV7 579 aa7.3□□□□□ -1.24
HNRNPC-233ENST00000557768 TGIF2Q9GZN2 237 aa7.3□□□□□ -1.24
HNRNPC-233ENST00000557768 RNF181Q9P0P0 153 aa7.3□□□□□ -1.24
HNRNPC-233ENST00000557768 PLEKHG2Q9H7P9 1386 aa7.3□□□□□ -1.24
HNRNPC-233ENST00000557768 DLGAP3O95886 979 aa7.29□□□□□ -1.24
HNRNPC-233ENST00000557768 PREPP48147 710 aa7.29□□□□□ -1.24
HNRNPC-233ENST00000557768 FCGRTP55899 365 aa7.29□□□□□ -1.24
HNRNPC-233ENST00000557768 AMOTQ4VCS5 1084 aa7.29□□□□□ -1.24
HNRNPC-233ENST00000557768 ANKRD34AQ69YU3 496 aa7.29□□□□□ -1.24
HNRNPC-233ENST00000557768 SULT6B1Q6IMI4 303 aa7.29□□□□□ -1.24
HNRNPC-233ENST00000557768 INTS5Q6P9B9 1019 aaKnown RBP7.29□□□□□ -1.24
HNRNPC-233ENST00000557768 NXPE4Q6UWF7 544 aa7.29□□□□□ -1.24
HNRNPC-233ENST00000557768 ARMC10Q8N2F6 343 aa7.29□□□□□ -1.24
HNRNPC-233ENST00000557768 C12orf50Q8NA57 414 aaPredicted RBP7.29□□□□□ -1.24
HNRNPC-233ENST00000557768 FAM46AQ96IP4 442 aaKnown RBP7.29□□□□□ -1.24
HNRNPC-233ENST00000557768 PANK3Q9H999 370 aa7.29□□□□□ -1.24
HNRNPC-233ENST00000557768 PPP4R2Q9NY27 417 aa7.29□□□□□ -1.24
HNRNPC-233ENST00000557768 RAXQ9Y2V3 346 aa7.29□□□□□ -1.24
HNRNPC-233ENST00000557768 COL11A2P13942 1736 aaPredicted RBP7.29□□□□□ -1.24
HNRNPC-233ENST00000557768 KDM2BQ8NHM5 1336 aa7.28□□□□□ -1.24
HNRNPC-233ENST00000557768 SIPA1L3O60292 1781 aaPredicted RBP7.28□□□□□ -1.24
HNRNPC-233ENST00000557768 FER1L6Q2WGJ9 1857 aa7.28□□□□□ -1.24
HNRNPC-233ENST00000557768 POLRMTO00411 1230 aaKnown RBP7.28□□□□□ -1.24
HNRNPC-233ENST00000557768 GAS2O43903 313 aaKnown RBP7.28□□□□□ -1.24
HNRNPC-233ENST00000557768 B3GALT4O96024 378 aa7.28□□□□□ -1.24
HNRNPC-233ENST00000557768 MAOBP27338 520 aa7.28□□□□□ -1.24
HNRNPC-233ENST00000557768 FAAP100Q0VG06 881 aa7.28□□□□□ -1.24
HNRNPC-233ENST00000557768 POU4F3Q15319 338 aa7.28□□□□□ -1.24
HNRNPC-233ENST00000557768 DTHD1Q6ZMT9 781 aa7.28□□□□□ -1.24
HNRNPC-233ENST00000557768 MORC1Q86VD1 984 aa7.28□□□□□ -1.24
HNRNPC-233ENST00000557768 FBF1Q8TES7 1133 aa7.28□□□□□ -1.24
HNRNPC-233ENST00000557768 STOML1Q9UBI4 398 aa7.28□□□□□ -1.24
HNRNPC-233ENST00000557768 MEGF11A6BM72 1044 aa7.27□□□□□ -1.25
HNRNPC-233ENST00000557768 CYP11A1P05108 521 aa7.27□□□□□ -1.25
HNRNPC-233ENST00000557768 BMP3P12645 472 aa7.27□□□□□ -1.25
HNRNPC-233ENST00000557768 FSTP19883 344 aa7.27□□□□□ -1.25
HNRNPC-233ENST00000557768 CDK11BP21127 795 aaKnown RBP7.27□□□□□ -1.25
HNRNPC-233ENST00000557768 CANXP27824 592 aaKnown RBP7.27□□□□□ -1.25
HNRNPC-233ENST00000557768 TM4SF1P30408 202 aa7.27□□□□□ -1.25
HNRNPC-233ENST00000557768 FSTL1Q12841 308 aa7.27□□□□□ -1.25
HNRNPC-233ENST00000557768 GNL2Q13823 731 aaKnown RBP7.27□□□□□ -1.25
HNRNPC-233ENST00000557768 UVSSAQ2YD98 709 aa7.27□□□□□ -1.25
HNRNPC-233ENST00000557768 EXOSC6Q5RKV6 272 aaKnown RBP7.27□□□□□ -1.25
HNRNPC-233ENST00000557768 DNAJC10Q8IXB1 793 aa7.27□□□□□ -1.25
HNRNPC-233ENST00000557768 SPATA32Q96LK8 384 aa7.27□□□□□ -1.25
HNRNPC-233ENST00000557768 MYRFLQ96LU7 910 aa7.27□□□□□ -1.25
HNRNPC-233ENST00000557768 FRMD6Q96NE9 622 aa7.27□□□□□ -1.25
HNRNPC-233ENST00000557768 TINF2Q9BSI4 451 aa7.27□□□□□ -1.25
HNRNPC-233ENST00000557768 TMPRSS13Q9BYE2 586 aa7.27□□□□□ -1.25
HNRNPC-233ENST00000557768 OSBPL7Q9BZF2 842 aa7.27□□□□□ -1.25
HNRNPC-233ENST00000557768 NRSN2Q9GZP1 204 aa7.27□□□□□ -1.25
HNRNPC-233ENST00000557768 KCNF1Q9H3M0 494 aa7.27□□□□□ -1.25
HNRNPC-233ENST00000557768 ACBD3Q9H3P7 528 aa7.27□□□□□ -1.25
HNRNPC-233ENST00000557768 CYP4F12Q9HCS2 524 aa7.27□□□□□ -1.25
HNRNPC-233ENST00000557768 PRKAG2Q9UGJ0 569 aa7.27□□□□□ -1.25
HNRNPC-233ENST00000557768 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.27□□□□□ -1.25
HNRNPC-233ENST00000557768 AK5Q9Y6K8 562 aa7.27□□□□□ -1.25
HNRNPC-233ENST00000557768 PCNTO95613 3336 aa7.27□□□□□ -1.25
HNRNPC-233ENST00000557768 ARFGEF2Q9Y6D5 1785 aa7.26□□□□□ -1.25
HNRNPC-233ENST00000557768 SCN7AQ01118 1682 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms