RNA–Protein interactions for RNA: ENST00000557764.5

TRAPPC6B-207, Transcript of trafficking protein particle complex 6B, humanhuman

TSL 2

Gene TRAPPC6B, Length 870 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6B-207ENST00000557764 SSH1Q8WYL5 1049 aa17.53■□□□□ 0.4
TRAPPC6B-207ENST00000557764 HIPK3Q9H422 1215 aa17.53■□□□□ 0.4
TRAPPC6B-207ENST00000557764 UMODL1Q5DID0 1318 aa17.52■□□□□ 0.4
TRAPPC6B-207ENST00000557764 EPOPA6NHQ4 379 aa17.52■□□□□ 0.4
TRAPPC6B-207ENST00000557764 ZBBXA8MT70 800 aa17.52■□□□□ 0.4
TRAPPC6B-207ENST00000557764 DUSP11O75319 330 aaKnown RBP17.52■□□□□ 0.4
TRAPPC6B-207ENST00000557764 ATP2A2P16615 1042 aaKnown RBP17.52■□□□□ 0.4
TRAPPC6B-207ENST00000557764 CCL23P55773 120 aa17.52■□□□□ 0.4
TRAPPC6B-207ENST00000557764 MPHOSPH10O00566 681 aaKnown RBP17.51■□□□□ 0.39
TRAPPC6B-207ENST00000557764 CA3P07451 260 aa17.51■□□□□ 0.39
TRAPPC6B-207ENST00000557764 TMEM67Q5HYA8 995 aa17.51■□□□□ 0.39
TRAPPC6B-207ENST00000557764 TTC6Q86TZ1 520 aa17.51■□□□□ 0.39
TRAPPC6B-207ENST00000557764 FBXL18Q96ME1 805 aa17.51■□□□□ 0.39
TRAPPC6B-207ENST00000557764 ZHX1Q9UKY1 873 aaPredicted RBP17.51■□□□□ 0.39
TRAPPC6B-207ENST00000557764 HDAC5Q9UQL6 1122 aa17.51■□□□□ 0.39
TRAPPC6B-207ENST00000557764 SNAI1O95863 264 aaPredicted RBP17.5■□□□□ 0.39
TRAPPC6B-207ENST00000557764 CYP2E1P05181 493 aaPredicted RBP17.5■□□□□ 0.39
TRAPPC6B-207ENST00000557764 CSPP1Q1MSJ5 1256 aa17.5■□□□□ 0.39
TRAPPC6B-207ENST00000557764 GNASQ5JWF2 1037 aa17.5■□□□□ 0.39
TRAPPC6B-207ENST00000557764 SPICE1Q8N0Z3 855 aa17.5■□□□□ 0.39
TRAPPC6B-207ENST00000557764 ARNTL2Q8WYA1 636 aa17.5■□□□□ 0.39
TRAPPC6B-207ENST00000557764 SPC25Q9HBM1 224 aa17.5■□□□□ 0.39
TRAPPC6B-207ENST00000557764 SRGAP3O43295 1099 aa17.49■□□□□ 0.39
TRAPPC6B-207ENST00000557764 CYP7A1P22680 504 aa17.49■□□□□ 0.39
TRAPPC6B-207ENST00000557764 PLCD1P51178 756 aa17.49■□□□□ 0.39
TRAPPC6B-207ENST00000557764 RIOX2Q8IUF8 465 aa17.49■□□□□ 0.39
TRAPPC6B-207ENST00000557764 RPUSD2Q8IZ73 545 aaKnown RBP17.49■□□□□ 0.39
TRAPPC6B-207ENST00000557764 MSL3Q8N5Y2 521 aaKnown RBP17.49■□□□□ 0.39
TRAPPC6B-207ENST00000557764 MIGA1Q8NAN2 632 aa17.49■□□□□ 0.39
TRAPPC6B-207ENST00000557764 SSUH2Q9Y2M2 353 aa17.49■□□□□ 0.39
TRAPPC6B-207ENST00000557764 MCM3APO60318 1980 aa17.48■□□□□ 0.39
TRAPPC6B-207ENST00000557764 ADCY6O43306 1168 aa17.48■□□□□ 0.39
TRAPPC6B-207ENST00000557764 GJA9P57773 515 aa17.48■□□□□ 0.39
TRAPPC6B-207ENST00000557764 TTC39AQ5SRH9 613 aa17.48■□□□□ 0.39
TRAPPC6B-207ENST00000557764 GJD3Q8N144 294 aa17.48■□□□□ 0.39
TRAPPC6B-207ENST00000557764 UPF3AQ9H1J1 476 aaKnown RBP17.48■□□□□ 0.39
TRAPPC6B-207ENST00000557764 CFAP54Q96N23 3096 aa17.47■□□□□ 0.39
TRAPPC6B-207ENST00000557764 STAT3P40763 770 aa17.47■□□□□ 0.39
TRAPPC6B-207ENST00000557764 NOC4LQ9BVI4 516 aaKnown RBP17.47■□□□□ 0.39
TRAPPC6B-207ENST00000557764 WNT8AQ9H1J5 351 aa17.47■□□□□ 0.39
TRAPPC6B-207ENST00000557764 KCNH6Q9H252 994 aa17.47■□□□□ 0.39
TRAPPC6B-207ENST00000557764 PIH1D3Q9NQM4 214 aaKnown RBP17.47■□□□□ 0.39
TRAPPC6B-207ENST00000557764 ADAMTS5Q9UNA0 930 aa17.47■□□□□ 0.39
TRAPPC6B-207ENST00000557764 ALADP13716 330 aa17.46■□□□□ 0.39
TRAPPC6B-207ENST00000557764 GRB10Q13322 594 aa17.46■□□□□ 0.39
TRAPPC6B-207ENST00000557764 ACVR2BQ13705 512 aa17.46■□□□□ 0.39
TRAPPC6B-207ENST00000557764 TTLL4Q14679 1199 aa17.46■□□□□ 0.39
TRAPPC6B-207ENST00000557764 MAMDC4Q6UXC1 1216 aa17.46■□□□□ 0.39
TRAPPC6B-207ENST00000557764 FAM178BQ8IXR5 827 aa17.46■□□□□ 0.39
TRAPPC6B-207ENST00000557764 VWCEQ96DN2 955 aa17.46■□□□□ 0.39
TRAPPC6B-207ENST00000557764 SCLYQ96I15 445 aa17.46■□□□□ 0.39
TRAPPC6B-207ENST00000557764 MEIS3Q99687 375 aa17.46■□□□□ 0.39
TRAPPC6B-207ENST00000557764 CACNA1AO00555 2505 aa17.46■□□□□ 0.38
TRAPPC6B-207ENST00000557764 ARHGEF15O94989 841 aa17.45■□□□□ 0.38
TRAPPC6B-207ENST00000557764 POLR3DP05423 398 aaPredicted RBP17.45■□□□□ 0.38
TRAPPC6B-207ENST00000557764 SSTR3P32745 418 aaPredicted RBP17.45■□□□□ 0.38
TRAPPC6B-207ENST00000557764 ZAP70P43403 619 aa17.45■□□□□ 0.38
TRAPPC6B-207ENST00000557764 TAP1Q03518 808 aa17.45■□□□□ 0.38
TRAPPC6B-207ENST00000557764 CCDC144BQ3MJ40 725 aa17.45■□□□□ 0.38
TRAPPC6B-207ENST00000557764 SLC43A3Q8NBI5 491 aa17.45■□□□□ 0.38
TRAPPC6B-207ENST00000557764 TRPV6Q9H1D0 765 aa17.45■□□□□ 0.38
TRAPPC6B-207ENST00000557764 FBXO28Q9NVF7 368 aa17.45■□□□□ 0.38
TRAPPC6B-207ENST00000557764 TRIOO75962 3097 aa17.45■□□□□ 0.38
TRAPPC6B-207ENST00000557764 COL4A4P53420 1690 aaPredicted RBP17.45■□□□□ 0.38
TRAPPC6B-207ENST00000557764 MYH8P13535 1937 aa17.45■□□□□ 0.38
TRAPPC6B-207ENST00000557764 SCN5AQ14524 2016 aa17.44■□□□□ 0.38
TRAPPC6B-207ENST00000557764 WDR46O15213 610 aaKnown RBP17.44■□□□□ 0.38
TRAPPC6B-207ENST00000557764 CTAGE5O15320 804 aa17.44■□□□□ 0.38
TRAPPC6B-207ENST00000557764 IGSF3O75054 1194 aa17.44■□□□□ 0.38
TRAPPC6B-207ENST00000557764 BEX3Q00994 111 aa17.44■□□□□ 0.38
TRAPPC6B-207ENST00000557764 EVX2Q03828 476 aa17.44■□□□□ 0.38
TRAPPC6B-207ENST00000557764 GABPAQ06546 454 aa17.44■□□□□ 0.38
TRAPPC6B-207ENST00000557764 CCDC158Q5M9N0 1113 aa17.44■□□□□ 0.38
TRAPPC6B-207ENST00000557764 CXCL17Q6UXB2 119 aa17.44■□□□□ 0.38
TRAPPC6B-207ENST00000557764 CERS3Q8IU89 383 aa17.44■□□□□ 0.38
TRAPPC6B-207ENST00000557764 CLEC10AQ8IUN9 316 aa17.44■□□□□ 0.38
TRAPPC6B-207ENST00000557764 SIAH1Q8IUQ4 282 aa17.44■□□□□ 0.38
TRAPPC6B-207ENST00000557764 DDX11Q96FC9 970 aa17.44■□□□□ 0.38
TRAPPC6B-207ENST00000557764 VCPKMTQ9H867 229 aa17.44■□□□□ 0.38
TRAPPC6B-207ENST00000557764 NAV1Q8NEY1 1877 aa17.44■□□□□ 0.38
TRAPPC6B-207ENST00000557764 VWA5AO00534 786 aa17.43■□□□□ 0.38
TRAPPC6B-207ENST00000557764 LPXNO60711 386 aa17.43■□□□□ 0.38
TRAPPC6B-207ENST00000557764 COPB2P35606 906 aa17.43■□□□□ 0.38
TRAPPC6B-207ENST00000557764 G3BP1Q13283 466 aaKnown RBP eCLIP17.43■□□□□ 0.38
TRAPPC6B-207ENST00000557764 ITGA7Q13683 1181 aa17.43■□□□□ 0.38
TRAPPC6B-207ENST00000557764 TMEM179Q6ZVK1 233 aa17.43■□□□□ 0.38
TRAPPC6B-207ENST00000557764 ARHGEF10LQ9HCE6 1279 aa17.43■□□□□ 0.38
TRAPPC6B-207ENST00000557764 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.43■□□□□ 0.38
TRAPPC6B-207ENST00000557764 ZNF214Q9UL59 606 aaPredicted RBP17.43■□□□□ 0.38
TRAPPC6B-207ENST00000557764 TMX2Q9Y320 296 aa17.43■□□□□ 0.38
TRAPPC6B-207ENST00000557764 ZNF318Q5VUA4 2279 aa17.43■□□□□ 0.38
TRAPPC6B-207ENST00000557764 B4GALT4O60513 344 aa17.42■□□□□ 0.38
TRAPPC6B-207ENST00000557764 IDH1O75874 414 aaKnown RBP17.42■□□□□ 0.38
TRAPPC6B-207ENST00000557764 MAGEB6Q8N7X4 407 aa17.42■□□□□ 0.38
TRAPPC6B-207ENST00000557764 AGBL1Q96MI9 1066 aa17.42■□□□□ 0.38
TRAPPC6B-207ENST00000557764 DBNDD2Q9BQY9 259 aa17.42■□□□□ 0.38
TRAPPC6B-207ENST00000557764 ABHD16BQ9H3Z7 469 aa17.42■□□□□ 0.38
TRAPPC6B-207ENST00000557764 SH2D4AQ9H788 454 aa17.42■□□□□ 0.38
TRAPPC6B-207ENST00000557764 MRS2Q9HD23 443 aa17.42■□□□□ 0.38
TRAPPC6B-207ENST00000557764 GRIN2DO15399 1336 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms